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OQ921331.1__WMX18798.1__X__00026
Bact-VirOQ921331.1__WMX18798.1__X__00026
Identity
- Accession:
- OQ921331 ↗
- Kingdom:
- phage
Quality
92.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Cepavirus›
Escherichia_phage_vB_EcoP_PAS7
TaxID: 3053875
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-74
Domain cluster:
rep: MG592511.1__AUR90293.1__NVP1139B_58__00058__D66-128
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1urjA03 | 1.10.150.560 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.63 | 45.0 | 4.35e-01 | 82.2% | 67.1% |
| 4toiA02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 39.0 | 4.56e-01 | 84.9% | 100.0% |
| 3rklA00 | 6.10.140.1640 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 43.0 | 4.25e-01 | 80.8% | 93.8% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 4.25e-01 | 94.5% | 81.9% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.56 | 39.0 | 3.38e-01 | 72.6% | 93.9% |
| 4q45A03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.56 | 39.0 | 4.29e-01 | 100.0% | 96.4% |
| 8ab6B02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 41.0 | 3.13e-01 | 83.6% | 83.8% |
| 3cx5A01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 41.0 | 3.01e-01 | 82.2% | 72.3% |
| 3n2oA03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 45.0 | 4.11e-01 | 93.2% | 100.0% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.53 | 44.0 | 4.21e-01 | 91.8% | 89.4% |
| 4esnA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.53 | 38.0 | 3.80e-01 | 86.3% | 71.8% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.52 | 39.0 | 3.85e-01 | 80.8% | 91.1% |
| 3mb5A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 44.0 | 3.35e-01 | 100.0% | 72.5% |
| 6pxcA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 38.0 | 3.43e-01 | 79.5% | 61.5% |
| 1u04A04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 40.0 | 3.02e-01 | 93.2% | 43.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4012787 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.63 | 46.0 | 4.96e-01 | 82.2% | 95.0% |
| 3626785 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.62 | 46.0 | 3.59e-01 | 83.6% | 82.8% |
| 4464727 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.59 | 44.0 | 4.00e-01 | 82.2% | 75.0% |
| 4944187 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.59 | 46.0 | 3.17e-01 | 84.9% | 34.1% |
| 4554621 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.58 | 43.0 | 4.04e-01 | 78.1% | 74.2% |
| 4458694 | 247.1.1.2 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,RMMBL | 0.56 | 43.0 | 2.99e-01 | 82.2% | 34.0% |
| 3996808 | 3749.1.1.6 ↗ | extended segments › 26S proteasome regulatory subunits C-terminal helices › 26S proteasome regulatory subunit RPN9 C-terminal helix › 26S proteasome regulatory subunit RPN9 C-terminal helix › Pepsin-I3 | 0.56 | 31.0 | 3.17e-01 | 84.9% | 54.3% |
| 4086283 | 102.1.1.23 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IMS_HHH | 0.55 | 40.0 | 3.97e-01 | 100.0% | 74.7% |
| 5021724 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 44.0 | 4.35e-01 | 89.0% | 98.8% |
| 3582184 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 37.0 | 2.63e-01 | 71.2% | 40.2% |
| 1883370 | 3455.1.1.5 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors › PexRD54_WY | 0.54 | 42.0 | 4.38e-01 | 91.8% | 94.0% |
| 4067146 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 32.0 | 3.85e-01 | 74.0% | 97.8% |