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OQ921331.1__WMX18815.1__X__00043

Bact-Vir

OQ921331.1__WMX18815.1__X__00043

Identity

Accession:
OQ921331 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Cepavirus› Escherichia_phage_vB_EcoP_PAS7

TaxID: 3053875

Cluster

View cluster (31 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iauA01 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.75 43.0 3.94e-01 100.0% 43.6%
6vtmB00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.71 47.0 3.97e-01 100.0% 41.7%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 44.0 3.20e-01 100.0% 26.9%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 4.73e-01 98.3% 67.5%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 46.0 3.96e-01 100.0% 48.0%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 53.0 4.92e-01 96.6% 80.3%
2nooA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 43.0 2.85e-01 74.6% 71.3%
1a21B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 40.0 3.34e-01 100.0% 39.8%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 5.06e-01 96.6% 87.7%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 4.92e-01 98.3% 82.2%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.64e-01 98.3% 74.3%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 47.0 4.68e-01 96.6% 85.0%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 41.0 3.49e-01 74.6% 91.4%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 4.65e-01 94.9% 78.9%
1ty0B01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.58 47.0 3.61e-01 100.0% 39.4%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.57 46.0 3.30e-01 91.5% 94.7%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 4.53e-01 96.6% 83.1%
6iw6B01 1.10.1410.10 Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › 0.57 45.0 3.13e-01 89.8% 55.5%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 48.0 4.02e-01 100.0% 56.2%
3b8fB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.57 46.0 3.44e-01 100.0% 36.6%
1uyvA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.56 40.0 2.70e-01 78.0% 48.9%
3ry3A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 39.0 2.63e-01 74.6% 70.7%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.56 46.0 3.67e-01 100.0% 45.0%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 38.0 3.59e-01 74.6% 93.7%
7jl1B01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.55 44.0 3.52e-01 100.0% 70.2%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 44.0 3.57e-01 100.0% 45.3%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 43.0 3.15e-01 100.0% 32.1%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 44.0 3.51e-01 100.0% 44.5%
3dlqR02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.54e-01 84.7% 90.0%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.54 41.0 3.45e-01 86.4% 83.5%
3bh1A03 3.40.140.40 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain 0.54 47.0 3.56e-01 100.0% 73.3%
2oz4A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.52e-01 79.7% 86.7%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 42.0 3.39e-01 100.0% 42.7%
4jzjC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.42e-01 86.4% 93.3%
3k1lA02 3.30.457.30 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.52 38.0 3.34e-01 78.0% 85.6%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.52 37.0 3.32e-01 91.5% 49.5%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.52 43.0 4.06e-01 98.3% 89.5%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 47.0 3.30e-01 100.0% 40.9%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 4.03e-01 100.0% 84.6%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 46.0 3.42e-01 100.0% 46.9%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 2.91e-01 100.0% 28.3%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.50 41.0 3.50e-01 94.9% 76.0%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.50 46.0 3.26e-01 100.0% 39.1%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 42.0 3.41e-01 100.0% 48.2%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3953959 4.1.1.424 ↗ beta barrels › SH3 › SH3 › SH3 › PF29823 0.82 65.0 7.02e-01 88.1% 100.0%
1018849 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.75 43.0 3.92e-01 100.0% 43.0%
3281300 4.1.1.426 ↗ beta barrels › SH3 › SH3 › SH3 › PF31188 0.73 60.0 5.90e-01 94.9% 96.9%
3791861 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.71 51.0 4.69e-01 76.3% 66.7%
1933310 1135.1.1.2 ↗ a+b complex topology › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › IMP2_C 0.70 41.0 4.01e-01 100.0% 52.4%
3925544 11.1.1.848 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7585 0.68 40.0 3.52e-01 100.0% 40.0%
3272931 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.68 41.0 3.39e-01 100.0% 34.3%
3574742 4.1.1.47 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin6 0.67 57.0 4.99e-01 98.3% 63.3%
3173156 4.1.1.344 ↗ beta barrels › SH3 › SH3 › SH3 › PF31193 0.67 55.0 5.08e-01 98.3% 70.0%
3624163 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 4.99e-01 98.3% 63.3%
3721787 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 55.0 5.02e-01 98.3% 78.8%
5032461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 55.0 5.41e-01 96.6% 87.7%
3936053 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.65 54.0 5.13e-01 96.6% 78.6%
3996686 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.65 54.0 4.04e-01 93.2% 71.3%
4018366 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.65 45.0 3.95e-01 100.0% 50.6%
3627817 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.64 53.0 3.40e-01 93.2% 35.3%
5053906 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.64 51.0 5.09e-01 98.3% 88.3%
3778135 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.64 52.0 3.94e-01 93.2% 65.3%
3272363 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.63 54.0 4.67e-01 98.3% 63.2%
4163661 4.1.1.446 ↗ beta barrels › SH3 › SH3 › SH3 › PF30222 0.63 53.0 5.16e-01 98.3% 85.3%
3740204 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.63 54.0 4.84e-01 100.0% 68.2%
3328647 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.63 51.0 4.65e-01 98.3% 65.9%
3772638 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.62 52.0 4.75e-01 100.0% 70.4%
3616088 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.99e-01 98.3% 82.9%
1120986 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.62 52.0 5.02e-01 96.6% 85.1%
3586008 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.97e-01 98.3% 84.3%
3515139 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 52.0 3.81e-01 100.0% 63.2%
3500684 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.61 51.0 4.67e-01 98.3% 71.2%
3819397 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.61 50.0 4.68e-01 98.3% 72.5%
4215906 3578.1.1.1 ↗ beta sandwiches › Third domain in metalloprotease StcE › Third domain in metalloprotease StcE › Third domain in metalloprotease StcE › TagA 0.60 46.0 3.77e-01 100.0% 45.7%
3352566 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.60 51.0 3.62e-01 100.0% 95.6%
3907190 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.60 50.0 4.37e-01 98.3% 61.1%
3232582 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.40e-01 98.3% 61.1%
3220403 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 51.0 4.28e-01 100.0% 75.2%
3442276 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 43.0 3.50e-01 79.7% 66.7%
1567474 2004.1.1.99 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.59 43.0 2.90e-01 81.4% 51.9%
5055413 10.20.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.59 45.0 3.49e-01 100.0% 37.7%
3267141 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 43.0 3.59e-01 100.0% 44.8%
4998404 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 36.0 3.60e-01 86.4% 60.0%
3691059 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.58 40.0 2.90e-01 72.9% 85.3%
3786396 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.57 51.0 3.96e-01 100.0% 46.9%
4485354 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.57 47.0 4.16e-01 96.6% 62.8%
4358168 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 48.0 4.02e-01 98.3% 57.3%
3730011 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.57 50.0 3.81e-01 100.0% 42.9%
3184235 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.57 50.0 3.76e-01 100.0% 42.1%
5018908 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.56 46.0 3.52e-01 100.0% 40.0%
5052436 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 44.0 4.10e-01 93.2% 80.0%
3409292 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 41.0 3.52e-01 100.0% 48.0%
3254881 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.19e-01 93.2% 84.0%
3927305 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 49.0 3.99e-01 100.0% 81.8%
3930177 2004.1.1.26 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin 0.55 42.0 2.65e-01 84.7% 89.4%
3697999 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 44.0 2.98e-01 91.5% 89.8%
3796107 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.55 41.0 3.63e-01 83.1% 70.0%
3262493 11.1.1.843 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.55 40.0 3.29e-01 83.1% 88.0%
4024503 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 4.15e-01 96.6% 88.7%
4183853 4.1.1.435 ↗ beta barrels › SH3 › SH3 › SH3 › PF29216 0.54 41.0 4.02e-01 98.3% 78.6%
3519916 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.54 41.0 3.59e-01 100.0% 52.6%
4976092 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 44.0 3.97e-01 98.3% 64.4%
3528111 10.21.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 0.54 46.0 3.61e-01 100.0% 44.8%
3772640 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.54 46.0 3.61e-01 100.0% 44.8%
3690811 220.1.1.67 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.53 43.0 3.75e-01 98.3% 78.0%
3495598 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.53 39.0 3.05e-01 84.7% 62.7%
4024940 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 45.0 3.29e-01 100.0% 68.2%
2541236 3820.1.1.0 ↗ a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain 0.52 42.0 3.74e-01 100.0% 78.1%
3843359 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.52 42.0 3.89e-01 98.3% 77.6%
3214234 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 43.0 4.31e-01 98.3% 98.3%
4997604 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.50 46.0 3.26e-01 100.0% 35.3%
608 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.50 41.0 3.50e-01 94.9% 76.0%