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OQ921333.1__WMX18984.1__X__00026

Bact-Vir

OQ921333.1__WMX18984.1__X__00026

Identity

Accession:
OQ921333 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Uetakevirus› Escherichia_phage_vB_EcoP_PAS61

TaxID: 3053874

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-84
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pt7C01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.62 44.0 4.04e-01 73.2% 100.0%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.60 30.0 3.59e-01 74.4% 70.2%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.60 49.0 3.63e-01 91.5% 44.3%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 47.0 3.59e-01 93.9% 41.7%
2dfkC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 41.0 3.41e-01 97.6% 44.7%
3t0pA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 45.0 3.64e-01 91.5% 59.9%
2pmvA01 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.55 38.0 2.66e-01 100.0% 22.3%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 44.0 3.33e-01 92.7% 42.5%
2bw2A02 3.30.70.1740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Bypass-of-forespore C, C-terminal domain 0.54 38.0 3.96e-01 75.6% 91.0%
2jvnA00 3.90.640.80 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.53 37.0 3.34e-01 74.4% 86.5%
4zyaB00 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.53 32.0 3.32e-01 92.7% 63.2%
1aihA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.51 42.0 3.51e-01 100.0% 47.6%
3sqiA02 1.10.443.20 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 0.50 42.0 3.05e-01 100.0% 45.1%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.50 34.0 3.78e-01 78.0% 100.0%
1c9rA04 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.50 38.0 3.52e-01 81.7% 80.4%
2fwrA01 3.40.1170.30 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.50 32.0 3.63e-01 90.2% 93.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587237 252.2.1.2 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Integrase_DNA 0.62 32.0 3.42e-01 84.1% 54.7%
4180524 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.57 41.0 2.75e-01 75.6% 53.4%
3715457 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.57 46.0 3.90e-01 93.9% 68.4%
3720248 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 43.0 2.56e-01 84.1% 19.1%
3346536 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.52 44.0 3.77e-01 97.6% 60.7%
3487901 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.52 35.0 3.69e-01 75.6% 77.3%
D2 high residues 93-137
PDB
Domain cluster: rep: KX231829.1__AUF81280.1__BI095_gp53__00004__D77-121