←Back to structures
OQ921337.1__WIT26048.1__X__00051
Bact-VirOQ921337.1__WIT26048.1__X__00051
Identity
- Accession:
- OQ921337 ↗
- Kingdom:
- phage
Quality
67.5
mean pLDDT
Taxonomy
TaxID: 3053431
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-99
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fb5A02 | 3.40.1700.10 | Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain | 0.73 | 48.0 | 3.79e-01 | 100.0% | 33.3% |
| 3sb1A01 | 3.30.1370.140 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › HupH hydrogenase expression protein, C-terminal domain | 0.71 | 52.0 | 4.47e-01 | 75.8% | 98.0% |
| 1mo9A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 44.0 | 3.49e-01 | 72.7% | 97.0% |
| 3fc7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 54.0 | 4.66e-01 | 100.0% | 85.0% |
| 2hdwA02 | 1.10.10.800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 49.0 | 4.42e-01 | 90.9% | 91.2% |
| 1lbvA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.59 | 41.0 | 3.34e-01 | 74.2% | 71.0% |
| 1h54A03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.59 | 40.0 | 3.87e-01 | 95.5% | 63.5% |
| 2o1uB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.58 | 42.0 | 3.20e-01 | 93.9% | 31.5% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.58 | 39.0 | 3.85e-01 | 75.8% | 66.7% |
| 4kh7B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 47.0 | 3.88e-01 | 90.9% | 77.1% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 39.0 | 2.54e-01 | 72.7% | 39.9% |
| 2ea9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 45.0 | 4.10e-01 | 90.9% | 90.4% |
| 3op7A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 44.0 | 3.37e-01 | 84.8% | 81.0% |
| 4bs9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 48.0 | 3.43e-01 | 95.5% | 84.4% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.56 | 42.0 | 3.54e-01 | 78.8% | 63.8% |
| 5i92F01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 44.0 | 3.28e-01 | 86.4% | 52.3% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 38.0 | 3.36e-01 | 74.2% | 75.0% |
| 5vbfA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 48.0 | 3.19e-01 | 100.0% | 52.8% |
| 3if2A00 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 45.0 | 2.77e-01 | 92.4% | 43.0% |
| 2qv6B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 44.0 | 3.72e-01 | 93.9% | 89.3% |
| 7w5lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 47.0 | 3.21e-01 | 100.0% | 53.1% |
| 5ekcF01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 46.0 | 3.10e-01 | 100.0% | 46.1% |
| 3dydA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 43.0 | 3.44e-01 | 87.9% | 83.2% |
| 3h5nD02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 46.0 | 3.16e-01 | 97.0% | 47.2% |
| 2o0yB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 45.0 | 3.43e-01 | 100.0% | 60.5% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.53 | 35.0 | 3.22e-01 | 75.8% | 49.5% |
| 1w7lA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 42.0 | 3.19e-01 | 86.4% | 80.6% |
| 2i8dA01 | 3.90.1150.200 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.53 | 40.0 | 3.80e-01 | 95.5% | 66.7% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.69e-01 | 95.5% | 33.4% |
| 6w0pA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.52 | 42.0 | 2.65e-01 | 95.5% | 97.2% |
| 1xi9B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 41.0 | 3.28e-01 | 89.4% | 76.4% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.52 | 41.0 | 2.42e-01 | 89.4% | 20.0% |
| 4lw2A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 39.0 | 3.11e-01 | 81.8% | 97.0% |
| 6t8qA00 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 43.0 | 2.66e-01 | 92.4% | 47.0% |
| 1xjhA00 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.52 | 34.0 | 3.47e-01 | 86.4% | 69.4% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 36.0 | 2.94e-01 | 77.3% | 82.4% |
| 4cvqA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 36.0 | 2.76e-01 | 75.8% | 80.9% |
| 4zfjD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 41.0 | 2.94e-01 | 92.4% | 92.5% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 31.0 | 3.13e-01 | 100.0% | 58.0% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 42.0 | 3.47e-01 | 100.0% | 65.4% |
| 7sf2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.46e-01 | 84.8% | 97.8% |
| 2bzyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 29.0 | 2.96e-01 | 95.5% | 58.1% |
| 1v2dA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 41.0 | 3.26e-01 | 89.4% | 80.6% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3979269 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.67 | 46.0 | 3.02e-01 | 71.2% | 32.0% |
| 4315725 | 295.1.1.12 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0231 | 0.67 | 60.0 | 4.90e-01 | 100.0% | 66.7% |
| 4930498 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.67 | 60.0 | 5.13e-01 | 100.0% | 64.0% |
| 4933731 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.65 | 52.0 | 3.14e-01 | 87.9% | 27.4% |
| 3480664 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 45.0 | 3.74e-01 | 75.8% | 50.4% |
| 5044629 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 50.0 | 4.18e-01 | 100.0% | 51.3% |
| 5017794 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 56.0 | 5.03e-01 | 100.0% | 82.2% |
| 2968694 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.61 | 42.0 | 3.05e-01 | 72.7% | 38.3% |
| 4512379 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 55.0 | 4.42e-01 | 100.0% | 53.6% |
| 3743864 | 109.4.1.1787 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup188_N-subdom_III | 0.60 | 46.0 | 2.53e-01 | 83.3% | 8.8% |
| 4406935 | 4099.1.1.19 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM8 | 0.60 | 41.0 | 3.15e-01 | 74.2% | 56.6% |
| 169734 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.60 | 54.0 | 4.66e-01 | 100.0% | 85.0% |
| 3607176 | 101.17.1.4 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › HU-CCDC81_euk_2 | 0.59 | 50.0 | 4.71e-01 | 97.0% | 79.3% |
| 3382274 | 5.1.4.369 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N | 0.58 | 41.0 | 2.28e-01 | 72.7% | 9.8% |
| 4537675 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.58 | 38.0 | 4.10e-01 | 87.9% | 81.8% |
| 4881091 | 286.1.1.5 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › CntK_N | 0.58 | 40.0 | 3.37e-01 | 72.7% | 44.4% |
| 3186255 | 223.1.1.21 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like | 0.57 | 48.0 | 3.05e-01 | 92.4% | 35.0% |
| 5042295 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.56 | 37.0 | 3.38e-01 | 77.3% | 48.9% |
| 4632068 | 4126.1.1.6 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA | 0.56 | 46.0 | 3.19e-01 | 92.4% | 91.3% |
| 5051713 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.56 | 38.0 | 3.05e-01 | 71.2% | 84.6% |
| 3176989 | 601.19.1.40 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › PF28954 | 0.55 | 44.0 | 3.27e-01 | 84.8% | 59.4% |
| 3455670 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.55 | 46.0 | 4.05e-01 | 93.9% | 96.0% |
| 4140424 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 42.0 | 3.57e-01 | 81.8% | 76.4% |
| 3398349 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 37.0 | 3.00e-01 | 74.2% | 36.0% |
| 4507562 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.54 | 37.0 | 3.94e-01 | 83.3% | 85.5% |
| 3641304 | 5.1.5.75 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 | 0.54 | 37.0 | 2.79e-01 | 74.2% | 47.2% |
| 3620624 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.54 | 42.0 | 2.96e-01 | 84.8% | 90.5% |
| 3808035 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.54 | 46.0 | 2.86e-01 | 95.5% | 42.9% |
| None | — | 0.53 | 38.0 | 2.47e-01 | 77.3% | 16.7% | |
| 3409803 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.53 | 42.0 | 2.68e-01 | 87.9% | 54.4% |
| 3169646 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 37.0 | 3.32e-01 | 74.2% | 65.6% |
| 4948894 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.52 | 45.0 | 2.86e-01 | 95.5% | 50.0% |
| 4970999 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.52 | 42.0 | 3.20e-01 | 90.9% | 86.7% |
| 3723542 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 38.0 | 3.21e-01 | 89.4% | 43.9% |
| 2780223 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 45.0 | 3.53e-01 | 97.0% | 79.4% |
| 3516331 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.51 | 42.0 | 2.90e-01 | 100.0% | 38.9% |
| 3477778 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.51 | 41.0 | 2.61e-01 | 100.0% | 34.2% |
| 4025792 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.50 | 43.0 | 3.34e-01 | 100.0% | 72.2% |
| 5004521 | 4317.1.1.0 ↗ | a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like | 0.50 | 36.0 | 3.73e-01 | 75.8% | 90.0% |
| 3843500 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 41.0 | 2.58e-01 | 100.0% | 20.9% |