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OQ921340.1__WIT26702.1__X__00110

Bact-Vir

OQ921340.1__WIT26702.1__X__00110

Identity

Accession:
OQ921340 ↗
Kingdom:
phage

Quality

72.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Okubovirus› Bacillus_phage_SPO1L5

TaxID: 3053434

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-80
PDB
Domain cluster: rep: MW419087.1__QQO41447.1__015DV004_232__00232__D3-68
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7by6B04 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.55 39.0 2.81e-01 73.8% 94.8%
4iq0C02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 39.0 3.11e-01 83.7% 72.4%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 37.0 3.55e-01 76.2% 71.3%
2iayA00 3.30.1820.10 Alpha Beta › 2-Layer Sandwich › Lp2179-like fold › Lp2179-like 0.51 35.0 3.15e-01 71.2% 73.7%
1u2kA02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.51 35.0 3.06e-01 83.7% 44.5%
3loyA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 36.0 3.27e-01 76.2% 71.1%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 42.0 3.30e-01 96.2% 69.0%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3253357 708.1.2.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.62 44.0 3.70e-01 73.8% 79.2%
4930963 2003.1.10.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.57 34.0 3.57e-01 72.5% 62.7%
3722133 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.57 44.0 3.78e-01 82.5% 83.2%
5040976 314.1.1.11 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.55 38.0 2.85e-01 72.5% 87.5%
3966121 5.1.5.9 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Cytochrom_D1 0.55 41.0 2.67e-01 81.2% 54.3%
3480210 708.1.2.8 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Eapp_C 0.55 38.0 3.51e-01 72.5% 70.2%
4964453 304.8.1.119 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF5778 0.54 42.0 3.60e-01 82.5% 84.8%
3669262 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.54 38.0 2.46e-01 75.0% 22.0%
3733331 708.1.2.10 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 0.54 42.0 3.67e-01 82.5% 73.0%
3438481 292.1.1.1 ↗ a+b two layers › RIP/Polo-box domain › Ribosome inactivating proteins (RIP) › Ribosome inactivating proteins (RIP) › RIP 0.53 39.0 2.89e-01 77.5% 47.5%
4680459 375.1.1.67 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N 0.52 30.0 3.64e-01 71.2% 100.0%
3445009 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.51 38.0 3.03e-01 81.2% 50.8%
4664970 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 29.0 3.64e-01 70.0% 100.0%
3705941 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 34.0 3.47e-01 71.2% 71.2%