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OQ921341.1__WIT26801.1__X__00008

Bact-Vir

OQ921341.1__WIT26801.1__X__00008

Identity

Accession:
OQ921341 ↗
Kingdom:
phage

Quality

74.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_SPbetaL1

TaxID: 3053435

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-100
PDB
Domain cluster: rep: hypothetical_protein_1__YP_009329993__Hubei_sobemo-like_virus_6__1923239__D113-207
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.70 31.0 3.31e-01 100.0% 45.1%
2p9rA00 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.69 42.0 4.22e-01 80.8% 59.8%
1zldA00 2.60.40.1920 Mainly Beta › Sandwich › Immunoglobulin-like › Proteinaceous host-selective toxin ToxA 0.68 40.0 3.96e-01 73.7% 55.9%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.68 57.0 5.43e-01 100.0% 78.1%
2z9iC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 49.0 5.12e-01 100.0% 83.7%
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.66 59.0 5.07e-01 100.0% 87.8%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.65 40.0 4.22e-01 100.0% 67.8%
1ulvA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 36.0 3.90e-01 80.8% 62.8%
4aq1A02 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 38.0 3.98e-01 81.8% 63.7%
1k32A04 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.64 35.0 3.63e-01 97.0% 54.7%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 26.0 3.65e-01 83.8% 77.6%
2hczX02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.64 43.0 4.24e-01 100.0% 65.4%
4ic6C01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 50.0 4.84e-01 100.0% 76.4%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 33.0 2.85e-01 100.0% 31.2%
1y8tA03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.63 35.0 3.68e-01 83.8% 59.1%
1f6fB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 38.0 3.88e-01 81.8% 61.9%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.62 27.0 3.49e-01 79.8% 71.4%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.61 40.0 4.17e-01 100.0% 70.2%
5irbA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 38.0 3.79e-01 81.8% 61.5%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 30.0 2.99e-01 100.0% 45.4%
3eb7A03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.56 34.0 2.77e-01 72.7% 30.5%
4qycB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 41.0 4.17e-01 80.8% 78.8%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 40.0 3.93e-01 76.8% 72.4%
1r8nA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 37.0 3.04e-01 71.7% 88.6%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.52 40.0 3.75e-01 81.8% 81.8%
1js8B02 2.60.310.10 Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain 0.51 40.0 4.01e-01 89.9% 80.0%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1560729 1.1.5.35 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF 0.73 64.0 5.60e-01 100.0% 65.3%
4379249 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.72 62.0 5.72e-01 100.0% 73.6%
4929587 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 59.0 6.13e-01 96.0% 98.9%
5082881 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 62.0 5.72e-01 98.0% 95.2%
4995815 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 59.0 5.47e-01 100.0% 77.6%
4015385 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.66 59.0 4.75e-01 100.0% 58.5%
184718 1.1.13.16 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_12 0.66 59.0 5.07e-01 100.0% 87.8%
3434538 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.64 50.0 3.93e-01 100.0% 38.6%
3290771 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.64 57.0 4.75e-01 100.0% 60.0%
3636918 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 56.0 4.37e-01 100.0% 53.3%
5047765 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 57.0 5.28e-01 100.0% 85.6%
4938770 7.1.1.10 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 0.62 40.0 4.03e-01 98.0% 64.0%
3967435 1.1.13.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.60 50.0 5.14e-01 99.0% 95.8%
3966280 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 50.0 5.12e-01 99.0% 95.8%
3939010 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 36.0 3.70e-01 80.8% 63.2%
3694265 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.57 43.0 3.91e-01 80.8% 62.2%
3978573 1.1.13.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.57 50.0 4.95e-01 100.0% 96.2%
5055297 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 4.18e-01 100.0% 85.9%
3993711 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 40.0 4.01e-01 80.8% 74.3%
3735669 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 39.0 3.96e-01 74.7% 86.6%
4931002 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.54 39.0 4.20e-01 74.7% 95.2%
185448 3341.1.1.0 ↗ 0.53 40.0 4.14e-01 98.0% 85.9%
3503000 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 34.0 3.68e-01 100.0% 77.6%
4026019 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.52 44.0 2.81e-01 93.9% 92.3%
3484354 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 45.0 3.96e-01 99.0% 74.7%
4965944 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.51 35.0 2.51e-01 71.7% 34.2%
3344075 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.50 35.0 2.86e-01 72.7% 63.5%