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OQ921341.1__WIT26852.1__X__00059

Bact-Vir

OQ921341.1__WIT26852.1__X__00059

Identity

Accession:
OQ921341 ↗
Kingdom:
phage

Quality

92.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-179
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p02B02 3.30.379.20 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › 0.51 35.0 3.96e-01 98.2% 93.4%
D2 high residues 190-289
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 42.0 5.38e-01 70.0% 88.1%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.77 51.0 5.79e-01 87.0% 90.7%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.73 52.0 5.60e-01 74.0% 100.0%
3oxfA05 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 45.0 5.13e-01 75.0% 84.0%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.71 57.0 5.87e-01 87.0% 90.3%
3cf6E05 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.70 50.0 3.70e-01 77.0% 30.3%
2d2sA01 1.20.58.1210 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain 0.70 48.0 4.56e-01 70.0% 68.1%
2rpaA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.69 48.0 5.35e-01 75.0% 92.2%
5o5jT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.69 47.0 5.05e-01 91.0% 82.4%
1ah7A00 1.10.575.10 Mainly Alpha › Orthogonal Bundle › P1 Nuclease › P1 Nuclease 0.69 54.0 3.99e-01 82.0% 78.8%
1xd4A04 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.69 47.0 3.65e-01 76.0% 32.6%
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.69 50.0 5.47e-01 76.0% 94.0%
3zc0D00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 57.0 4.59e-01 91.0% 58.8%
2jbwA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.67 52.0 5.20e-01 84.0% 96.1%
3dzaA01 1.20.120.1940 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YfdX protein domain 0.65 57.0 5.41e-01 94.0% 88.0%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 57.0 4.58e-01 95.0% 60.2%
6axfA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.64 48.0 4.59e-01 79.0% 79.5%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 47.0 4.64e-01 78.0% 71.7%
1e2aA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.64 54.0 5.45e-01 92.0% 93.1%
1wkbA03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.63 49.0 4.60e-01 95.0% 67.8%
3a0oA02 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.63 54.0 3.68e-01 95.0% 77.3%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 54.0 5.41e-01 94.0% 95.1%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 52.0 5.24e-01 91.0% 92.2%
4dlqA02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 46.0 4.72e-01 79.0% 83.2%
2ondA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 49.0 3.45e-01 86.0% 36.0%
3iqcA00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.61 53.0 5.05e-01 99.0% 81.5%
3n71A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 49.0 3.88e-01 91.0% 71.4%
2v0cA04 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.58 50.0 4.35e-01 100.0% 60.4%
2pbeA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.57 48.0 4.43e-01 90.0% 100.0%
2jx0A00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.56 49.0 4.49e-01 97.0% 81.7%
6lpfA01 1.10.730.20 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › 0.56 50.0 4.28e-01 100.0% 61.3%
3craB01 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.56 38.0 4.10e-01 71.0% 81.4%
2qgmA03 1.20.1440.30 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain 0.56 45.0 4.37e-01 95.0% 76.7%
1st6A04 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.56 47.0 4.51e-01 94.0% 88.9%
2xq9A02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.55 47.0 4.45e-01 94.0% 84.3%
1a7eA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.55 45.0 4.32e-01 100.0% 76.3%
3vprA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 43.0 3.89e-01 94.0% 60.0%
2w0gA00 1.20.58.610 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain 0.54 49.0 4.53e-01 100.0% 97.7%
4ebjA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.53 44.0 4.01e-01 87.0% 100.0%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.51 39.0 4.15e-01 90.0% 95.4%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3687202 109.4.1.95 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.78 59.0 4.73e-01 78.0% 61.4%
3629701 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.77 54.0 5.82e-01 72.0% 84.7%
4997415 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.77 54.0 4.77e-01 72.0% 63.6%
165995 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.77 51.0 5.79e-01 87.0% 90.7%
5056992 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 55.0 4.78e-01 93.0% 51.0%
3629501 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.76 51.0 3.30e-01 92.0% 16.3%
3253634 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.75 54.0 5.39e-01 93.0% 72.4%
4056285 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.74 50.0 5.20e-01 91.0% 73.7%
4270503 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.73 50.0 5.34e-01 91.0% 82.4%
4088690 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.72 49.0 5.43e-01 91.0% 87.5%
3931593 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.72 51.0 5.63e-01 88.0% 92.5%
4474310 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.71 49.0 5.34e-01 91.0% 87.5%
5056430 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.71 46.0 5.33e-01 90.0% 94.3%
4095914 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.71 48.0 5.32e-01 91.0% 87.5%
4321884 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.71 48.0 5.00e-01 91.0% 75.3%
4063100 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.70 49.0 5.37e-01 94.0% 90.0%
4193935 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.70 48.0 5.11e-01 91.0% 82.4%
3706056 604.22.1.0 alpha bundles › Spectrin repeat-like › tubulin binding cofactor C N-terminal domain › tubulin binding cofactor C N-terminal domain 0.70 48.0 5.09e-01 88.0% 82.4%
4985507 604.10.1.0 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.70 53.0 5.58e-01 80.0% 95.6%
4290271 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.69 48.0 5.05e-01 91.0% 80.0%
1719259 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 55.0 4.33e-01 86.0% 58.9%
4668964 604.9.1.0 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.68 46.0 4.96e-01 91.0% 82.4%
3402741 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.68 54.0 4.85e-01 92.0% 62.2%
3790386 109.6.1.1 alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF 0.68 51.0 3.38e-01 78.0% 22.7%
3924801 109.4.1.1643 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6 0.67 48.0 4.92e-01 90.0% 77.9%
4927814 109.10.1.1 alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin 0.67 56.0 4.42e-01 91.0% 53.8%
4518250 109.4.1.1660 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27570 0.66 57.0 3.75e-01 92.0% 80.8%
3935017 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.66 46.0 5.02e-01 90.0% 90.0%
5082191 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.66 54.0 5.45e-01 97.0% 87.0%
4483437 601.13.1.2 alpha bundles › Four-helical up-and-down bundle › Flagellar export chaperone FliS › Flagellar export chaperone FliS › FliS 0.66 53.0 4.85e-01 92.0% 66.2%
3628101 6155.1.1.1 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.66 51.0 4.76e-01 83.0% 80.8%
4058399 109.4.1.37 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BRO1 0.66 56.0 3.82e-01 94.0% 83.8%
3973959 177.1.1.0 alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease 0.65 51.0 3.83e-01 83.0% 86.2%
3860669 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 55.0 4.32e-01 92.0% 62.0%
4000800 109.10.1.1 alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin 0.64 54.0 4.53e-01 90.0% 77.6%
4950702 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.64 57.0 5.32e-01 98.0% 82.4%
3576710 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.64 48.0 5.15e-01 90.0% 94.1%
3978919 604.10.1.1 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA 0.63 54.0 5.24e-01 92.0% 85.5%
3877229 109.4.1.1394 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_12 0.63 53.0 3.99e-01 90.0% 45.1%
4605127 3883.1.1.0 alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain 0.63 53.0 4.06e-01 92.0% 47.0%
3614952 109.4.1.1287 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_8, TPR_16 0.63 53.0 3.19e-01 91.0% 16.1%
3751733 604.12.1.109 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › BRO1 0.63 54.0 4.52e-01 93.0% 78.2%
3394451 6155.1.1.1 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.63 48.0 4.46e-01 83.0% 72.3%
3221738 192.29.1.172 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF29678 0.62 53.0 4.79e-01 95.0% 75.0%
5018283 633.10.1.0 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.61 42.0 4.20e-01 94.0% 69.0%
3414610 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 50.0 3.17e-01 91.0% 25.3%
4975376 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 53.0 4.45e-01 95.0% 69.1%
3420616 3684.1.1.2 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 0.59 54.0 4.10e-01 100.0% 74.1%
4948369 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.58 51.0 4.51e-01 94.0% 93.5%
4016217 109.4.1.30 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT 0.57 49.0 3.13e-01 93.0% 62.7%
3611676 109.4.1.30 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT 0.57 52.0 3.52e-01 99.0% 71.3%
3446444 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.56 44.0 3.12e-01 83.0% 40.7%
3598767 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 50.0 3.57e-01 98.0% 77.7%
4241927 140.1.1.15 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g 0.56 50.0 4.09e-01 99.0% 53.5%
3203000 109.4.1.30 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT 0.52 47.0 3.50e-01 98.0% 80.8%
4478658 109.4.1.1421 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_19 0.51 43.0 3.04e-01 95.0% 76.1%