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OQ921341.1__WIT26904.1__X__00111
Bact-VirOQ921341.1__WIT26904.1__X__00111
Identity
- Accession:
- OQ921341 ↗
- Kingdom:
- phage
Quality
84.9
mean pLDDT
Taxonomy
TaxID: 3053435
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-95
Domain cluster:
rep: MW460247.1__QRE00508.1__X__00034__D8-134
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01541.31 best | GIY-YIG | 42.1 | 1.20e-10 | 92.5% | 87.2% |
D2
high
residues 129-222
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27199.1 best | YonV_C | 42.0 | 1.40e-10 | 98.9% | 45.4% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bapA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.77 | 56.0 | 4.58e-01 | 75.5% | 61.7% |
| 3eoeD01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.70 | 48.0 | 4.22e-01 | 71.3% | 69.3% |
| 5d84A02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 47.0 | 4.48e-01 | 70.2% | 97.3% |
| 1gcaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 47.0 | 3.94e-01 | 72.3% | 64.6% |
| 3vs8H00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.66 | 58.0 | 3.86e-01 | 97.9% | 32.8% |
| 4ijaA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 48.0 | 4.14e-01 | 76.6% | 76.7% |
| 4n03A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 46.0 | 3.79e-01 | 72.3% | 50.0% |
| 3ua3A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 53.0 | 4.34e-01 | 87.2% | 85.5% |
| 3u4qB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 61.0 | 4.53e-01 | 100.0% | 45.4% |
| 1epuA01 | 3.40.50.2060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 | 0.65 | 46.0 | 4.20e-01 | 74.5% | 58.6% |
| 4m37A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 49.0 | 4.32e-01 | 81.9% | 80.0% |
| 2xvyA02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 47.0 | 4.34e-01 | 76.6% | 76.6% |
| 1pjrA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 60.0 | 4.59e-01 | 100.0% | 48.5% |
| 2wyoA04 | 3.40.50.1760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic | 0.64 | 45.0 | 4.00e-01 | 73.4% | 81.3% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 46.0 | 3.82e-01 | 74.5% | 55.8% |
| 4xr9B02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 55.0 | 4.27e-01 | 96.8% | 90.0% |
| 4d9kA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 55.0 | 4.06e-01 | 96.8% | 78.2% |
| 4b3fX03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 57.0 | 4.42e-01 | 100.0% | 49.0% |
| 1bgvA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 43.0 | 3.64e-01 | 73.4% | 70.1% |
| 1m6eX02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 46.0 | 3.59e-01 | 80.9% | 59.8% |
| 4ix1A00 | 3.40.50.12500 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 50.0 | 3.80e-01 | 95.7% | 76.5% |
| 3f3kA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.58 | 48.0 | 3.60e-01 | 93.6% | 63.5% |
| 1w36F03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 51.0 | 3.70e-01 | 100.0% | 35.9% |
| 4dgsA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 42.0 | 3.63e-01 | 77.7% | 75.5% |
| 1qhhA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 44.0 | 3.74e-01 | 85.1% | 53.7% |
| 2f9wA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 42.0 | 3.92e-01 | 78.7% | 79.7% |
| 7fbhB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 47.0 | 3.59e-01 | 95.7% | 68.5% |
| 2f7lA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.55 | 41.0 | 4.08e-01 | 89.4% | 76.5% |
| 6ecpB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.54 | 40.0 | 3.45e-01 | 76.6% | 54.5% |
| 3i4jB02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 48.0 | 3.54e-01 | 98.9% | 38.6% |
| 4a8tA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.54 | 41.0 | 3.54e-01 | 84.0% | 85.4% |
| 1nd6A00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.54 | 47.0 | 3.27e-01 | 100.0% | 74.0% |
| 7l9pE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 42.0 | 3.31e-01 | 86.2% | 97.6% |
| 4af1A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.52 | 44.0 | 4.01e-01 | 92.6% | 74.6% |
| 2gp6A01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 44.0 | 3.34e-01 | 98.9% | 68.6% |
| 2fnuA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 46.0 | 3.45e-01 | 100.0% | 46.9% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3700367 | 2003.1.5.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 | 0.73 | 56.0 | 3.60e-01 | 80.9% | 27.8% |
| 3998537 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.69 | 60.0 | 4.68e-01 | 94.7% | 73.0% |
| 4941284 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.69 | 61.0 | 4.67e-01 | 97.9% | 58.6% |
| 3996625 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.69 | 49.0 | 4.26e-01 | 73.4% | 75.7% |
| 5042886 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.69 | 60.0 | 4.79e-01 | 96.8% | 78.4% |
| 3229848 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.68 | 61.0 | 4.51e-01 | 100.0% | 60.4% |
| 4294361 | 2003.1.1.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › AlaDh_PNT_C | 0.67 | 49.0 | 4.17e-01 | 76.6% | 53.5% |
| 3939493 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.66 | 54.0 | 4.03e-01 | 89.4% | 48.1% |
| 3874017 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.66 | 59.0 | 4.77e-01 | 100.0% | 85.0% |
| 4997088 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.65 | 51.0 | 3.90e-01 | 85.1% | 55.8% |
| 3777175 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.65 | 59.0 | 4.82e-01 | 100.0% | 84.1% |
| 3671259 | 7579.1.1.20 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › LCAT | 0.64 | 44.0 | 3.50e-01 | 70.2% | 63.7% |
| 4002382 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.64 | 47.0 | 3.33e-01 | 77.7% | 80.3% |
| 3491772 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.64 | 44.0 | 3.67e-01 | 71.3% | 84.2% |
| 3682367 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.63 | 50.0 | 4.44e-01 | 100.0% | 59.3% |
| 3922790 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.63 | 56.0 | 3.75e-01 | 98.9% | 60.0% |
| 3852542 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 53.0 | 4.16e-01 | 95.7% | 68.8% |
| 3692706 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.61 | 47.0 | 3.33e-01 | 81.9% | 37.1% |
| 3780349 | 2004.1.1.239 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SLFN-g3_helicase | 0.60 | 52.0 | 3.98e-01 | 96.8% | 59.6% |
| 3999361 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.60 | 49.0 | 3.63e-01 | 89.4% | 51.4% |
| 3876993 | 2004.1.1.239 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SLFN-g3_helicase | 0.60 | 52.0 | 4.17e-01 | 96.8% | 70.5% |
| 4954425 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.60 | 49.0 | 3.82e-01 | 92.6% | 80.0% |
| 4947149 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.60 | 41.0 | 4.12e-01 | 71.3% | 100.0% |
| 4491186 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.60 | 45.0 | 4.12e-01 | 80.9% | 84.0% |
| 3785149 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 54.0 | 4.33e-01 | 100.0% | 62.8% |
| 3673212 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.58 | 46.0 | 3.44e-01 | 86.2% | 43.2% |
| 5053982 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.58 | 40.0 | 2.98e-01 | 72.3% | 77.0% |
| 4497605 | 2003.1.5.54 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 | 0.58 | 51.0 | 3.63e-01 | 100.0% | 72.0% |
| 4944731 | 7577.1.1.4 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC | 0.58 | 48.0 | 3.39e-01 | 91.5% | 38.3% |
| 3519517 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.58 | 51.0 | 4.05e-01 | 100.0% | 63.6% |
| 4157104 | 3924.1.1.1 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2 | 0.57 | 41.0 | 3.19e-01 | 76.6% | 84.9% |
| 5049735 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.57 | 49.0 | 3.37e-01 | 96.8% | 58.4% |
| 3494475 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.56 | 48.0 | 3.79e-01 | 97.9% | 78.1% |
| 4569125 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 39.0 | 2.90e-01 | 73.4% | 63.1% |
| 3610284 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.55 | 47.0 | 3.55e-01 | 97.9% | 55.3% |
| 2600291 | 7585.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 | 0.55 | 46.0 | 4.66e-01 | 100.0% | 92.4% |
| 3952658 | 2484.1.1.113 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › baeRF_family2 | 0.55 | 47.0 | 4.30e-01 | 100.0% | 71.2% |
| 3544201 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.53 | 46.0 | 3.65e-01 | 100.0% | 71.4% |
| 3996552 | 2484.3.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N_2 | 0.53 | 39.0 | 3.34e-01 | 77.7% | 98.1% |
| 4982916 | 247.1.1.53 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Beta-Casp | 0.53 | 46.0 | 3.70e-01 | 97.9% | 61.6% |
| 3698565 | 2004.1.1.508 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 | 0.52 | 45.0 | 3.01e-01 | 100.0% | 81.0% |
| 4996575 | 2003.1.7.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › LUD_dom | 0.51 | 46.0 | 3.58e-01 | 100.0% | 46.8% |