←Back to structures

OQ921341.1__WIT26911.1__X__00118

Bact-Vir

OQ921341.1__WIT26911.1__X__00118

Identity

Accession:
OQ921341 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_SPbetaL1

TaxID: 3053435

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 49-125
PDB
Domain cluster: rep: OM735687.1__UNY50260.1__X__00039__D3-67
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 52.0 5.07e-01 97.4% 69.9%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 52.0 5.04e-01 98.7% 68.6%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 50.0 4.83e-01 98.7% 65.9%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.69 49.0 5.22e-01 96.1% 85.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 5.04e-01 94.8% 94.7%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 41.0 4.57e-01 93.5% 83.1%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 44.0 4.80e-01 97.4% 87.1%
2p3wB01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.64 51.0 4.76e-01 87.0% 71.9%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 49.0 5.02e-01 97.4% 85.5%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 42.0 4.51e-01 92.2% 82.5%
6iccA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.63 53.0 5.21e-01 97.4% 98.8%
5m3nA03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.61 47.0 4.42e-01 85.7% 70.1%
2l97A01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.61 47.0 4.41e-01 85.7% 85.9%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.61 44.0 4.00e-01 98.7% 56.7%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 41.0 4.41e-01 94.8% 81.8%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 40.0 3.21e-01 100.0% 34.0%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 40.0 3.33e-01 100.0% 39.3%
3wkmB01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.58 48.0 4.61e-01 96.1% 90.4%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 37.0 3.97e-01 93.5% 76.9%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 42.0 3.42e-01 76.6% 74.5%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 44.0 4.52e-01 98.7% 85.3%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.40e-01 97.4% 86.1%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 45.0 4.79e-01 93.5% 98.5%
4jj0B00 2.30.42.60 Mainly Beta › Roll › Pdz3 Domain › 0.56 46.0 3.58e-01 92.2% 43.3%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 31.0 3.67e-01 80.5% 86.7%
3f7eA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 39.0 3.33e-01 76.6% 84.4%
4jzjC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.80e-01 84.4% 92.3%
3pfnC02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.53 45.0 3.84e-01 98.7% 73.0%
2b39A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 38.0 3.35e-01 77.9% 90.4%
1x3zA04 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 26.0 3.05e-01 70.1% 64.8%
2i6vA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 40.0 3.95e-01 85.7% 81.6%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 4.29e-01 100.0% 89.5%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.56e-01 79.2% 87.6%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.52 45.0 3.92e-01 97.4% 67.5%
3zssA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.36e-01 79.2% 88.5%
2x1cB01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.51 39.0 2.73e-01 85.7% 82.3%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 36.0 3.11e-01 75.3% 77.2%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 35.0 3.71e-01 92.2% 84.1%
1o67C00 2.40.33.20 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.50 37.0 2.77e-01 80.5% 66.2%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4026408 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.78 56.0 5.12e-01 98.7% 58.0%
3598125 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 55.0 5.59e-01 98.7% 77.3%
4559371 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 52.0 5.69e-01 97.4% 87.3%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 51.0 4.93e-01 96.1% 63.5%
3328647 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.75 55.0 5.33e-01 98.7% 69.4%
4270910 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 53.0 5.52e-01 97.4% 82.9%
4335951 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 52.0 5.40e-01 97.4% 79.5%
4282868 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 52.0 5.42e-01 97.4% 82.9%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 52.0 5.38e-01 98.7% 82.4%
3625817 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.69 52.0 5.17e-01 100.0% 76.2%
4141828 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 52.0 5.34e-01 98.7% 82.4%
3945489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 42.0 4.94e-01 90.9% 94.0%
4547801 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 49.0 4.69e-01 98.7% 64.4%
490 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 50.0 5.11e-01 98.7% 81.1%
4183853 4.1.1.435 ↗ beta barrels › SH3 › SH3 › SH3 › PF29216 0.67 48.0 4.99e-01 94.8% 81.4%
3581896 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.67 42.0 4.54e-01 93.5% 75.4%
3281945 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 53.0 5.00e-01 98.7% 71.1%
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.67 42.0 4.80e-01 93.5% 90.7%
3456496 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.66 45.0 3.93e-01 97.4% 47.0%
959119 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.66 44.0 5.02e-01 92.2% 96.3%
5042892 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.65 44.0 4.84e-01 96.1% 88.3%
3440094 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.65 44.0 4.80e-01 96.1% 88.3%
4956443 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 43.0 4.82e-01 94.8% 88.3%
4087011 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.01e-01 98.7% 71.6%
4007430 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.65 52.0 4.99e-01 88.3% 83.3%
5027944 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.64 56.0 5.03e-01 100.0% 82.7%
4932609 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 44.0 4.68e-01 97.4% 83.1%
4177200 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.64 41.0 4.61e-01 94.8% 90.9%
4059465 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.64 42.0 4.41e-01 94.8% 76.5%
3910727 4.1.1.353 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 0.63 42.0 4.55e-01 94.8% 83.1%
3451175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 42.0 4.81e-01 98.7% 98.2%
4936051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 43.0 4.82e-01 93.5% 100.0%
5035742 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 42.0 4.62e-01 97.4% 91.7%
3457163 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 43.0 4.27e-01 96.1% 70.0%
4272593 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 54.0 5.29e-01 98.7% 86.9%
4514021 7.1.1.10 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 0.62 53.0 5.00e-01 98.7% 95.8%
4096240 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.61 52.0 4.89e-01 100.0% 97.0%
331590 7.1.1.10 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 0.61 48.0 4.40e-01 87.0% 65.7%
3918032 7.1.1.5 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.61 49.0 4.47e-01 89.6% 65.7%
3744438 7.1.1.4 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › GRASP55_65 0.61 49.0 4.76e-01 92.2% 88.9%
4938919 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.43e-01 98.7% 86.2%
4231372 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.60 49.0 5.05e-01 97.4% 100.0%
3930366 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 41.0 4.57e-01 96.1% 93.3%
5011500 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.59 44.0 4.10e-01 97.4% 62.0%
4024240 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 43.0 4.32e-01 96.1% 75.0%
4530301 7.1.1.10 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 0.59 48.0 4.78e-01 93.5% 98.8%
3935101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 41.0 4.42e-01 97.4% 89.2%
4055478 7.1.1.10 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 0.58 44.0 4.17e-01 83.1% 71.6%
4118011 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.58 46.0 4.50e-01 98.7% 77.6%
3214234 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.58e-01 100.0% 100.0%
3410370 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 43.0 4.48e-01 94.8% 87.1%
3526953 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 44.0 4.80e-01 94.8% 100.0%
4242799 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 39.0 3.78e-01 90.9% 63.5%
3611538 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.57 39.0 4.26e-01 75.3% 100.0%
3844612 376.1.1.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ 0.57 36.0 3.89e-01 84.4% 81.7%
3512419 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 44.0 4.32e-01 100.0% 78.8%
3467678 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 43.0 3.83e-01 97.4% 58.2%
3604442 205.1.1.87 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › HcyBio 0.56 45.0 3.69e-01 89.6% 55.7%
4932696 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.55 43.0 4.01e-01 98.7% 66.0%
3898370 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 39.0 4.34e-01 96.1% 100.0%
3684646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 43.0 4.28e-01 98.7% 82.5%
5006740 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.55 47.0 4.20e-01 100.0% 92.2%
3923043 4326.1.1.1 ↗ a+b two layers › ERH-like › ERH-like › ERH-like › ER 0.55 38.0 3.54e-01 72.7% 96.0%
3176702 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.53 47.0 3.78e-01 100.0% 94.2%
3693741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 43.0 4.53e-01 94.8% 100.0%
3768742 4.1.1.355 ↗ beta barrels › SH3 › SH3 › SH3 › WAC_Acf1_DNA_bd 0.52 45.0 3.14e-01 97.4% 37.3%
3593768 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 44.0 4.18e-01 98.7% 97.9%
3960558 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.50 38.0 3.30e-01 83.1% 72.0%