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OQ921342.1__WIT27048.1__X__00061

Bact-Vir

OQ921342.1__WIT27048.1__X__00061

Identity

Accession:
OQ921342 ↗
Kingdom:
phage

Quality

91.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_SPbetaL2

TaxID: 3053436

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-104
PDB
Domain cluster: rep: IMGVR_UViG_3300029595_000275-3300029595-Ga0245140_10195616__D180-260
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23491.2 best bPH_8 86.7 1.00e-24 97.4% 89.0%
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.79 65.0 5.74e-01 100.0% 62.4%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.76 62.0 5.93e-01 100.0% 77.0%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.74 62.0 5.68e-01 100.0% 70.0%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 66.0 5.11e-01 100.0% 56.9%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 56.0 5.44e-01 100.0% 75.6%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 60.0 5.18e-01 100.0% 61.7%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 63.0 5.69e-01 100.0% 79.6%
3tfmA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 60.0 5.52e-01 100.0% 74.7%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 60.0 5.32e-01 100.0% 72.2%
2vszB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 58.0 5.09e-01 100.0% 80.3%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 59.0 5.26e-01 100.0% 75.9%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.65 59.0 4.88e-01 100.0% 77.6%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 55.0 4.71e-01 100.0% 58.9%
4ifsA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.64 57.0 4.79e-01 100.0% 78.8%
2kumA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 40.0 4.53e-01 96.1% 87.7%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 37.0 4.03e-01 96.1% 75.4%
1vwxk00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.60 43.0 4.53e-01 93.5% 84.1%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.60 54.0 4.39e-01 100.0% 62.4%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.59 50.0 4.37e-01 100.0% 61.0%
4a18P00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.57 40.0 4.28e-01 93.5% 86.4%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.56 45.0 4.57e-01 92.2% 89.2%
1ypoA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.56 38.0 3.29e-01 72.7% 49.2%
2o5aA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 38.0 3.59e-01 77.9% 74.5%
3j7yD01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 37.0 3.42e-01 89.6% 53.8%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.52 42.0 4.24e-01 92.2% 90.8%
4mchA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.52 41.0 3.05e-01 92.2% 79.4%
6lbrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 43.0 3.30e-01 97.4% 77.7%
5mx4A00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.51 41.0 3.02e-01 92.2% 82.0%
3eeiA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.51 36.0 2.68e-01 76.6% 81.8%
1aqtA01 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.50 41.0 4.00e-01 97.4% 79.5%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4214812 4.8.1.26 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › bPH_8 0.90 84.0 7.99e-01 100.0% 88.6%
4034423 4.8.1.26 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › bPH_8 0.87 78.0 7.50e-01 96.1% 91.8%
4648433 4.8.1.26 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › bPH_8 0.86 79.0 7.64e-01 98.7% 90.6%
5059406 220.1.1.291 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_4 0.86 70.0 7.10e-01 100.0% 88.0%
4982077 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.84 77.0 7.17e-01 100.0% 89.5%
5076406 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.84 76.0 7.36e-01 97.4% 90.6%
5071830 220.1.1.291 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_4 0.84 74.0 7.00e-01 97.4% 81.1%
4261008 220.1.1.290 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_5 0.82 75.0 6.71e-01 100.0% 92.4%
5061503 220.1.1.290 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_5 0.80 73.0 6.53e-01 100.0% 89.5%
4276957 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.79 55.0 6.34e-01 100.0% 100.0%
5077089 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.79 63.0 6.62e-01 97.4% 91.4%
5071416 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.79 73.0 6.62e-01 100.0% 87.0%
4977715 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.79 72.0 6.22e-01 100.0% 78.3%
4380028 220.1.1.291 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_4 0.78 68.0 6.78e-01 100.0% 90.0%
3989362 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.78 53.0 6.12e-01 98.7% 100.0%
3949336 220.1.1.216 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N 0.77 61.0 5.41e-01 100.0% 60.0%
3251857 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.76 62.0 5.14e-01 100.0% 51.1%
4936961 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.75 63.0 6.07e-01 100.0% 80.0%
3481680 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 68.0 5.85e-01 100.0% 66.1%
3629491 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 50.0 5.70e-01 83.1% 96.4%
3881195 220.1.1.145 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RASGAP 0.74 58.0 5.87e-01 97.4% 85.3%
4998413 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 58.0 6.04e-01 100.0% 92.9%
3743110 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.73 59.0 5.27e-01 100.0% 62.9%
3877687 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.73 67.0 5.56e-01 100.0% 67.7%
4949986 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.73 63.0 5.53e-01 100.0% 65.5%
5007104 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.73 62.0 5.54e-01 100.0% 67.6%
3841924 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.72 63.0 5.51e-01 100.0% 65.5%
4936963 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 59.0 5.76e-01 100.0% 81.2%
3744023 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.72 60.0 5.03e-01 100.0% 55.2%
3716892 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.72 66.0 5.55e-01 100.0% 73.2%
3607882 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 66.0 5.79e-01 100.0% 71.8%
5054847 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.71 65.0 5.55e-01 100.0% 70.8%
4964695 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.71 62.0 5.23e-01 100.0% 59.2%
5017964 220.1.1.322 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF6141 0.71 64.0 6.14e-01 100.0% 91.0%
5081087 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 60.0 5.29e-01 100.0% 64.5%
3516025 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.70 64.0 5.75e-01 100.0% 80.0%
4192693 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.69 61.0 5.88e-01 100.0% 85.9%
3607724 220.1.1.92 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.69 63.0 5.26e-01 100.0% 66.9%
3509362 220.1.1.160 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.69 59.0 5.48e-01 100.0% 75.5%
3477183 220.1.1.9 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs 0.69 63.0 5.23e-01 100.0% 70.8%
5049640 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 55.0 5.53e-01 100.0% 86.1%
3706686 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.68 45.0 4.89e-01 93.5% 81.5%
3540088 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.68 62.0 5.16e-01 100.0% 69.2%
4927397 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 62.0 4.77e-01 100.0% 57.6%
3829886 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.67 48.0 4.87e-01 88.3% 74.4%
4003604 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 60.0 5.37e-01 100.0% 79.0%
3289995 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 59.0 5.25e-01 100.0% 70.0%
5048073 896.1.1.1 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.66 45.0 4.81e-01 89.6% 83.1%
5047349 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.65 60.0 5.55e-01 100.0% 88.4%
5081495 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 59.0 5.07e-01 100.0% 72.5%
4334411 896.1.1.1 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.65 45.0 4.83e-01 93.5% 86.2%
5074128 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.65 45.0 4.83e-01 88.3% 86.2%
3784559 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 58.0 4.83e-01 100.0% 66.2%
3774381 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 53.0 5.58e-01 92.2% 100.0%
3178227 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.63 56.0 3.67e-01 100.0% 25.6%
4360067 896.1.1.1 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.58 45.0 4.50e-01 93.5% 82.3%
4975115 7541.1.1.0 ↗ a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins 0.57 40.0 3.27e-01 74.0% 50.3%
3828657 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 43.0 3.99e-01 83.1% 67.0%
5049868 7541.1.1.1 ↗ a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.55 45.0 3.60e-01 92.2% 92.9%
5044653 309.1.2.1 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD 0.54 47.0 3.71e-01 100.0% 67.1%
5011089 7541.1.1.1 ↗ a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.54 44.0 3.53e-01 94.8% 94.1%
4950135 7541.1.1.1 ↗ a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.53 42.0 3.42e-01 92.2% 98.2%
4989801 7541.1.1.1 ↗ a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.52 43.0 3.44e-01 94.8% 91.2%
5012345 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.51 36.0 2.51e-01 74.0% 43.5%
3501716 7541.1.1.1 ↗ a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.50 36.0 2.83e-01 76.6% 69.4%