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OQ921344.1__WIT27416.1__X__00052
Bact-VirOQ921344.1__WIT27416.1__X__00052
Identity
- Accession:
- OQ921344 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Taxonomy
TaxID: 3053438
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-82
Domain cluster:
rep: MN270258.1__QGJ85228.1__X__00001__D22-74
D2
medium
residues 1-17_97-141
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gqcC01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.73 | 58.0 | 4.48e-01 | 87.1% | 57.7% |
| 3gv5B01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.72 | 57.0 | 4.39e-01 | 85.5% | 79.5% |
| 5yuyA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.71 | 58.0 | 4.59e-01 | 88.7% | 64.8% |
| 5kfnA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.68 | 59.0 | 4.24e-01 | 96.8% | 76.3% |
| 1x31C01 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.67 | 53.0 | 4.50e-01 | 87.1% | 74.3% |
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 47.0 | 3.98e-01 | 85.5% | 53.5% |
| 2i8eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 48.0 | 4.59e-01 | 85.5% | 73.0% |
| 4mgrA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.62 | 49.0 | 3.07e-01 | 90.3% | 46.6% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 47.0 | 4.61e-01 | 85.5% | 76.5% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.62 | 47.0 | 3.73e-01 | 85.5% | 78.8% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 48.0 | 4.27e-01 | 87.1% | 67.7% |
| 1zpwX00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 47.0 | 4.34e-01 | 85.5% | 64.6% |
| 5lf5A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 45.0 | 4.01e-01 | 82.3% | 86.0% |
| 4rxlA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 41.0 | 3.33e-01 | 71.0% | 56.4% |
| 2g0iA00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.60 | 45.0 | 3.80e-01 | 83.9% | 74.8% |
| 4r5zA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 47.0 | 3.91e-01 | 93.5% | 69.8% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.59 | 49.0 | 3.73e-01 | 95.2% | 95.5% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.59 | 48.0 | 3.53e-01 | 95.2% | 54.0% |
| 4w8iA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 45.0 | 3.73e-01 | 87.1% | 80.2% |
| 2kx2A00 | 3.30.780.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.59 | 46.0 | 4.01e-01 | 87.1% | 85.4% |
| 1a7jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 3.20e-01 | 96.8% | 24.4% |
| 2yqrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 44.0 | 3.80e-01 | 85.5% | 85.4% |
| 3ui3A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 45.0 | 3.96e-01 | 88.7% | 75.5% |
| 5o5iA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 45.0 | 3.96e-01 | 85.5% | 73.9% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 44.0 | 4.06e-01 | 87.1% | 76.8% |
| 2eyqA07 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.56 | 43.0 | 3.39e-01 | 87.1% | 44.9% |
| 2x5fA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 43.0 | 3.76e-01 | 87.1% | 58.7% |
| 4y4mC00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 42.0 | 2.89e-01 | 85.5% | 68.2% |
| 3devA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.56 | 46.0 | 3.85e-01 | 96.8% | 72.4% |
| 4u7mA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 3.82e-01 | 87.1% | 75.8% |
| 4e6nB00 | 3.30.1610.20 | Alpha Beta › 2-Layer Sandwich › c-terminal autoproteolytic domain of nucleoporin nup98 › Hen1, N-terminal domain | 0.55 | 44.0 | 3.22e-01 | 96.8% | 81.7% |
| 1mkfA01 | 2.60.40.1330 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 44.0 | 3.22e-01 | 100.0% | 88.9% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 40.0 | 3.92e-01 | 88.7% | 97.1% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 3.29e-01 | 71.0% | 72.6% |
| 1ewqB01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.51 | 37.0 | 3.16e-01 | 82.3% | 46.6% |
| 2zxqA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 38.0 | 2.50e-01 | 82.3% | 18.6% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.50 | 34.0 | 2.87e-01 | 72.6% | 77.1% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588004 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.76 | 65.0 | 4.93e-01 | 93.5% | 66.4% |
| 4162762 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.75 | 60.0 | 4.80e-01 | 87.1% | 69.2% |
| 4141589 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.74 | 60.0 | 4.69e-01 | 88.7% | 63.8% |
| 4153524 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.73 | 60.0 | 4.65e-01 | 88.7% | 72.3% |
| 3470146 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.73 | 60.0 | 4.20e-01 | 88.7% | 81.1% |
| 3550678 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.71 | 60.0 | 4.21e-01 | 90.3% | 63.9% |
| 4292191 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.70 | 55.0 | 4.29e-01 | 85.5% | 59.4% |
| 5025092 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.69 | 54.0 | 5.15e-01 | 93.5% | 72.0% |
| 3926710 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.68 | 55.0 | 3.87e-01 | 88.7% | 81.0% |
| 5007943 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 50.0 | 4.80e-01 | 85.5% | 72.9% |
| 5045691 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.64 | 51.0 | 4.90e-01 | 87.1% | 87.1% |
| 4889364 | 304.56.1.3 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › Cas3_I-F_Cas2 | 0.63 | 48.0 | 3.89e-01 | 85.5% | 43.7% |
| 3185863 | 304.4.1.11 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › EthD | 0.62 | 51.0 | 4.17e-01 | 100.0% | 79.3% |
| 3831906 | 2003.1.5.185 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF28720 | 0.62 | 44.0 | 3.37e-01 | 75.8% | 32.7% |
| 3614187 | 241.6.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › P34-Arc | 0.62 | 52.0 | 3.80e-01 | 95.2% | 74.3% |
| 2800426 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.61 | 49.0 | 4.83e-01 | 87.1% | 92.3% |
| 3465161 | 2003.1.5.185 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF28720 | 0.61 | 43.0 | 3.23e-01 | 75.8% | 31.8% |
| 4421321 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.61 | 48.0 | 3.62e-01 | 85.5% | 40.6% |
| 4958723 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.61 | 49.0 | 4.73e-01 | 88.7% | 85.7% |
| 4429890 | 3016.1.1.11 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA | 0.60 | 49.0 | 4.12e-01 | 95.2% | 89.6% |
| 4957085 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 47.0 | 4.70e-01 | 91.9% | 86.2% |
| 3569385 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.59 | 44.0 | 4.04e-01 | 83.9% | 60.0% |
| 4139805 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 43.0 | 4.15e-01 | 82.3% | 76.0% |
| 4949564 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.59 | 45.0 | 4.60e-01 | 90.3% | 90.0% |
| 4131749 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.58 | 45.0 | 3.86e-01 | 88.7% | 55.5% |
| 3641017 | 11.1.1.591 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig7 | 0.58 | 44.0 | 3.46e-01 | 82.3% | 63.0% |
| 3774150 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 36.0 | 2.99e-01 | 87.1% | 33.9% |
| 4031720 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.58 | 44.0 | 3.98e-01 | 85.5% | 64.4% |
| 3707542 | 7604.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N | 0.57 | 38.0 | 2.89e-01 | 71.0% | 49.7% |
| 4941230 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.57 | 42.0 | 3.52e-01 | 82.3% | 52.2% |
| 3491884 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 43.0 | 3.82e-01 | 85.5% | 73.7% |
| 3709395 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.56 | 43.0 | 4.09e-01 | 82.3% | 93.3% |
| 5545 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.56 | 43.0 | 3.32e-01 | 87.1% | 41.8% |
| None | — | 0.56 | 42.0 | 2.88e-01 | 85.5% | 66.8% | |
| 4539039 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.55 | 46.0 | 3.63e-01 | 93.5% | 57.8% |
| 4335944 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.55 | 42.0 | 3.79e-01 | 88.7% | 71.6% |
| 3263593 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 3.74e-01 | 88.7% | 72.0% |
| 3704965 | 7604.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N | 0.55 | 37.0 | 3.25e-01 | 71.0% | 46.3% |
| 3810606 | 376.1.2.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT | 0.54 | 37.0 | 3.63e-01 | 72.6% | 85.7% |
| 3696335 | 327.11.2.50 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26118 | 0.54 | 41.0 | 4.30e-01 | 87.1% | 98.2% |
| 3798434 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.54 | 38.0 | 3.29e-01 | 79.0% | 68.1% |
| 3629193 | 101.1.9.23 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TdIF1_2nd | 0.53 | 38.0 | 3.25e-01 | 79.0% | 67.0% |
| 677 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.53 | 43.0 | 3.14e-01 | 95.2% | 51.8% |
| 3963633 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.53 | 41.0 | 3.09e-01 | 85.5% | 38.7% |
| 3493388 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.66e-01 | 83.9% | 96.0% |
| 5012625 | 7535.1.1.1 ↗ | a/b three-layered sandwiches › Dipeptide transport protein › Dipeptide transport protein › Dipeptide transport protein › Peptidase_M55 | 0.50 | 39.0 | 2.68e-01 | 93.5% | 21.5% |