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OQ921344.1__WIT27516.1__X__00152

Bact-Vir

OQ921344.1__WIT27516.1__X__00152

Identity

Accession:
OQ921344 ↗
Kingdom:
phage

Quality

95.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_SPbetaL4

TaxID: 3053438

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-33_114-167
PDB
Domain cluster: rep: KT898134.1__ALN97593.1__ARM81mr_p12__00012__D4-32_93-137
D2 high residues 38-107
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zt5A02 3.30.40.230 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.65 54.0 5.13e-01 92.9% 97.6%
5hkxA04 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.60 36.0 4.31e-01 85.7% 95.5%
5d0iB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.59 33.0 3.79e-01 77.1% 76.5%
1fthA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.58 42.0 3.63e-01 78.6% 84.6%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.57 47.0 3.58e-01 91.4% 92.4%
2eqpA00 4.10.400.20 Few Secondary Structures › Irregular › Low-density Lipoprotein Receptor › 0.56 30.0 3.39e-01 94.3% 70.0%
2lvhA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.56 35.0 4.01e-01 90.0% 97.8%
2okmA00 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 47.0 3.76e-01 100.0% 63.7%
2bayE00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 39.0 4.24e-01 98.6% 93.2%
2xy1A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 4.15e-01 98.6% 84.5%
3lrqB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 41.0 3.91e-01 100.0% 72.5%
7xc8A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.52 33.0 3.02e-01 95.7% 47.4%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 40.0 3.10e-01 90.0% 93.2%
3vk6A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.50 38.0 4.10e-01 100.0% 94.9%
4wz0A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.50 40.0 3.40e-01 100.0% 54.1%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3556828 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.63 34.0 3.72e-01 87.1% 63.6%
4996272 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 41.0 4.40e-01 95.7% 78.3%
5041978 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 37.0 4.34e-01 88.6% 93.3%
4986348 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.61 50.0 3.62e-01 94.3% 31.2%
4331385 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 51.0 5.17e-01 94.3% 95.7%
5011230 314.1.1.2 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b 0.60 49.0 3.02e-01 94.3% 14.5%
5027835 314.1.1.2 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b 0.59 49.0 3.04e-01 94.3% 16.2%
3476530 376.1.1.8 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.59 41.0 4.28e-01 90.0% 78.5%
5054247 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 46.0 4.79e-01 94.3% 98.5%
3964444 601.1.2.89 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PqiA 0.56 45.0 3.55e-01 92.9% 72.5%
4027874 5060.1.1.1 ↗ alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 0.55 37.0 2.61e-01 71.4% 52.4%
3701832 5060.1.1.1 ↗ alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 0.54 39.0 2.76e-01 78.6% 31.7%
4876589 376.1.1.15 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse 0.54 37.0 4.32e-01 94.3% 100.0%
4094864 7582.1.1.2 ↗ a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 0.53 44.0 3.41e-01 97.1% 83.3%
3902772 376.1.1.8 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.53 41.0 4.15e-01 100.0% 82.9%
3806101 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.53 41.0 4.37e-01 100.0% 96.7%
4125793 2005.1.1.40 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g 0.52 45.0 2.76e-01 100.0% 60.8%
3347073 376.1.1.8 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.51 41.0 3.60e-01 100.0% 61.0%
4262340 375.1.1.203 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1, tRNA-synt_1g 0.50 44.0 2.72e-01 100.0% 60.0%