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OQ921345.1__WIT27559.1__X__00006

Bact-Vir

OQ921345.1__WIT27559.1__X__00006

Identity

Accession:
OQ921345 ↗
Kingdom:
phage

Quality

97.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_SPbetaL5

TaxID: 3053439

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-98
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2iayA00 3.30.1820.10 Alpha Beta › 2-Layer Sandwich › Lp2179-like fold › Lp2179-like 0.80 74.0 6.95e-01 100.0% 83.3%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.61 46.0 4.82e-01 100.0% 86.7%
2r1iA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 42.0 3.81e-01 86.6% 53.1%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.59 38.0 4.16e-01 86.6% 80.8%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 43.0 2.84e-01 80.4% 42.6%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.56 47.0 3.03e-01 90.7% 41.1%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 48.0 4.07e-01 97.9% 87.9%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 44.0 3.05e-01 89.7% 41.5%
2p18A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 47.0 3.38e-01 99.0% 64.7%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 47.0 4.32e-01 100.0% 83.6%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 43.0 2.90e-01 92.8% 51.8%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
6354 4097.1.1.1 ↗ a+b two layers › Lp2179-like › Lp2179-like › Lp2179-like › DUF1831 0.80 74.0 6.97e-01 100.0% 84.1%
2755883 331.19.1.1 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin 0.62 47.0 4.90e-01 100.0% 84.8%
4662378 1032.1.1.0 ↗ alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain 0.61 49.0 2.85e-01 99.0% 9.2%
3937930 206.1.1.10 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.59 51.0 3.44e-01 96.9% 51.7%
3176357 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.58 48.0 3.10e-01 90.7% 42.8%
3441510 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 45.0 3.23e-01 81.4% 40.7%
3444588 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 44.0 2.93e-01 82.5% 34.2%
1153941 243.4.1.2 ↗ a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbG_N 0.56 42.0 4.29e-01 81.4% 87.5%
3397645 5.1.4.85 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N 0.54 46.0 3.20e-01 91.8% 89.4%
4986263 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 38.0 3.31e-01 96.9% 47.1%
3915194 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 46.0 3.09e-01 93.8% 31.9%
1169103 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.53 40.0 2.63e-01 80.4% 37.8%
None — 0.53 39.0 2.69e-01 79.4% 58.7%
3933561 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 30.0 2.96e-01 94.8% 49.5%
5081985 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 42.0 2.99e-01 86.6% 57.7%
3325704 5.1.4.222 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 0.52 44.0 3.02e-01 92.8% 47.0%
3419526 5.1.5.146 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_AT5G49610-like 0.52 41.0 2.81e-01 82.5% 47.1%
3586270 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 46.0 3.01e-01 97.9% 41.6%
3628265 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 46.0 3.03e-01 97.9% 42.6%
4939670 5.1.3.20 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 0.52 43.0 3.02e-01 88.7% 78.0%
4429728 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 40.0 2.82e-01 84.5% 45.4%
3615631 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.51 44.0 3.11e-01 97.9% 87.0%
2387834 5.4.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like 0.50 43.0 3.68e-01 92.8% 69.3%
4108772 243.3.1.10 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 0.50 34.0 3.80e-01 76.3% 90.7%