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OQ921345.1__WIT27567.1__X__00014

Bact-Vir

OQ921345.1__WIT27567.1__X__00014

Identity

Accession:
OQ921345 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-64
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sfnA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.72 51.0 3.36e-01 75.9% 74.7%
1xv2C01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.69 43.0 3.46e-01 100.0% 32.4%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.68 42.0 4.40e-01 91.4% 68.6%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 54.0 5.41e-01 100.0% 86.4%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 51.0 4.95e-01 94.8% 74.2%
6nwmA01 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.65 55.0 4.02e-01 94.8% 91.0%
2d93A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 42.0 3.29e-01 70.7% 79.1%
1ng2A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 45.0 5.00e-01 75.9% 100.0%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 49.0 4.77e-01 96.6% 77.3%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 43.0 3.67e-01 75.9% 57.6%
1v9xA00 3.30.1740.10 Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type 0.61 51.0 4.15e-01 96.6% 69.3%
3myxA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 46.0 3.79e-01 86.2% 75.7%
3rnsA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 43.0 3.52e-01 75.9% 52.8%
2rhqB03 3.50.40.10 Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 0.60 51.0 3.62e-01 100.0% 94.1%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 46.0 4.35e-01 94.8% 68.5%
4p72A03 3.50.40.10 Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 0.59 50.0 3.58e-01 100.0% 95.0%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.59 33.0 3.13e-01 84.5% 42.0%
2c5qA00 3.50.30.40 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Ribonuclease E inhibitor RraA/RraA-like 0.59 48.0 3.32e-01 96.6% 83.2%
1x8mA01 2.60.120.520 Mainly Beta › Sandwich › Jelly Rolls › pectin degrading enzyme 5-keto 4- deoxyuronate isomerase, domain 1 0.58 44.0 3.51e-01 82.8% 81.1%
2k5qA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.58 47.0 3.92e-01 89.7% 82.9%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.58 37.0 3.07e-01 86.2% 34.6%
1tq5A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 44.0 3.57e-01 86.2% 77.6%
2ogjA01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.57 41.0 3.35e-01 87.9% 38.3%
5by5A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 45.0 3.61e-01 87.9% 46.1%
1sefA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 43.0 3.49e-01 86.2% 80.7%
2vecA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 43.0 3.44e-01 86.2% 79.0%
3b6hA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.55 48.0 2.81e-01 96.6% 90.6%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 39.0 3.53e-01 84.5% 53.6%
1o5uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 43.0 3.82e-01 87.9% 60.2%
1wueB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 45.0 3.35e-01 91.4% 98.0%
2oktA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 45.0 3.50e-01 91.4% 55.5%
3toyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 43.0 3.34e-01 86.2% 44.1%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 38.0 3.49e-01 91.4% 55.1%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.54 45.0 3.54e-01 98.3% 65.2%
3kfvA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 47.0 3.97e-01 98.3% 90.0%
1g2bA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 42.0 4.11e-01 93.1% 79.0%
2f4pA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 44.0 3.46e-01 94.8% 85.1%
5f7uA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 36.0 3.40e-01 75.9% 55.3%
1tkkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 43.0 3.50e-01 91.4% 60.0%
2g3mA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 35.0 3.30e-01 77.6% 52.0%
4m0hA01 2.60.120.1440 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 3.42e-01 98.3% 89.9%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 46.0 3.81e-01 98.3% 69.2%
2qddA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 43.0 3.36e-01 91.4% 96.2%
3dg6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 43.0 3.47e-01 91.4% 61.4%
3myxB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 46.0 3.64e-01 100.0% 59.0%
2oztA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 42.0 3.40e-01 91.4% 58.5%
3px5A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 42.0 3.38e-01 89.7% 59.5%
3jvaA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 42.0 3.42e-01 91.4% 60.5%
5i0fB04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 35.0 3.20e-01 75.9% 48.8%
2f2hA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 34.0 3.60e-01 75.9% 85.4%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.51 41.0 3.51e-01 89.7% 89.7%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 44.0 3.89e-01 100.0% 86.4%
3cewA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 45.0 3.66e-01 100.0% 73.6%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.51 30.0 2.88e-01 84.5% 44.4%
3ik4B01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 41.0 3.33e-01 91.4% 57.6%
3es1A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 45.0 3.51e-01 100.0% 59.5%
2pgwA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 41.0 3.07e-01 91.4% 42.7%
2zadA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 41.0 3.34e-01 91.4% 60.5%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3979600 10.12.1.116 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30441 0.71 55.0 4.10e-01 84.5% 89.0%
3977881 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.67 50.0 3.71e-01 82.8% 84.4%
2502895 2.27.1.0 beta barrels › OB-fold 0.66 57.0 5.24e-01 98.3% 98.7%
3729687 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.65 56.0 3.60e-01 100.0% 76.9%
3980387 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.65 49.0 3.61e-01 82.8% 80.6%
3637320 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.64 46.0 3.31e-01 75.9% 36.3%
4933556 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.64 45.0 3.68e-01 75.9% 52.7%
3721815 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.64 51.0 3.68e-01 87.9% 64.2%
1108143 3772.1.1.1 beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › FecR 0.63 45.0 3.50e-01 75.9% 50.8%
1837476 331.1.1.6 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.63 35.0 3.35e-01 84.5% 44.8%
3880486 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 44.0 4.42e-01 79.3% 74.6%
4649321 865.1.1.1 beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 0.62 54.0 3.78e-01 100.0% 91.5%
4202116 865.1.1.1 beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 0.61 53.0 3.67e-01 100.0% 83.7%
3691749 2487.1.1.8 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like 0.61 51.0 3.45e-01 96.6% 82.1%
4432988 865.1.1.1 beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 0.61 53.0 3.67e-01 100.0% 85.7%
3972386 10.12.1.85 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_6 0.61 49.0 3.59e-01 94.8% 92.8%
3494269 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.60 41.0 2.60e-01 72.4% 33.9%
4010516 10.12.1.8 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding 0.60 49.0 3.77e-01 94.8% 99.3%
3916871 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.60 41.0 3.17e-01 72.4% 79.3%
5058072 865.1.1.1 beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 0.60 51.0 3.51e-01 100.0% 98.6%
4401263 865.1.1.1 beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 0.59 49.0 3.48e-01 100.0% 90.0%
5037411 304.22.1.0 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain 0.58 46.0 3.84e-01 86.2% 56.0%
3265780 3529.1.1.1 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault 0.58 47.0 4.69e-01 91.4% 86.7%
3289062 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 42.0 3.66e-01 96.6% 51.1%
3587975 2.12.1.1 beta barrels › OB-fold › BC4932-like › BC4932-like › DUF1093 0.57 41.0 3.31e-01 77.6% 68.3%
5066346 865.1.1.1 beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 0.56 47.0 3.34e-01 100.0% 97.5%
3186321 136.1.1.0 alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases 0.55 50.0 2.73e-01 100.0% 27.9%
3918340 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 49.0 4.59e-01 100.0% 81.4%
3716892 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 46.0 3.65e-01 96.6% 74.8%
3592269 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.54e-01 98.3% 73.3%
3779679 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.54 42.0 2.68e-01 87.9% 20.3%
3532264 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.54 42.0 3.14e-01 87.9% 41.3%
5840 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.54 44.0 3.44e-01 91.4% 56.0%
3557677 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 43.0 4.06e-01 89.7% 97.1%
135609 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.53 44.0 3.41e-01 91.4% 56.2%
331943 10.12.1.27 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.53 46.0 3.66e-01 98.3% 60.5%
3593970 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 2.98e-01 89.7% 30.3%
185601 7505.1.1.1 a/b three-layered sandwiches › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › MKLP1_Arf_bdg 0.53 38.0 3.19e-01 77.6% 86.8%
4494448 2008.1.1.183 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27227 0.53 44.0 3.43e-01 96.6% 74.8%
3646843 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.52 41.0 2.60e-01 89.7% 29.7%
3514819 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 41.0 2.63e-01 87.9% 21.0%
140145 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.52 42.0 3.34e-01 91.4% 55.6%
3919483 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 40.0 2.58e-01 87.9% 20.0%
3482049 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 43.0 3.16e-01 94.8% 81.6%
3812547 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.52 40.0 4.28e-01 94.8% 96.0%
5027407 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.52 42.0 3.42e-01 91.4% 61.1%
3970041 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.52 42.0 3.40e-01 91.4% 62.6%
5000178 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.52 42.0 3.26e-01 91.4% 52.3%
3195147 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.51 45.0 3.18e-01 100.0% 41.6%
164729 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 44.0 3.67e-01 100.0% 71.7%
5019455 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.51 39.0 2.69e-01 82.8% 36.9%
3974170 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 43.0 3.71e-01 100.0% 65.0%
3732427 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 45.0 3.20e-01 100.0% 43.7%
3708879 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.51 32.0 2.57e-01 93.1% 30.9%
3492162 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.50 39.0 2.98e-01 87.9% 43.3%