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OQ921345.1__WIT27695.1__X__00142
Bact-VirOQ921345.1__WIT27695.1__X__00142
Identity
- Accession:
- OQ921345 ↗
- Kingdom:
- phage
Quality
74.9
mean pLDDT
Taxonomy
TaxID: 3053439
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-62
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u00A02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.78 | 57.0 | 4.84e-01 | 78.3% | 59.4% |
| 4kzsA02 | 6.10.140.1870 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 60.0 | 5.73e-01 | 88.3% | 80.0% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 51.0 | 4.51e-01 | 71.7% | 51.8% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.74 | 61.0 | 6.07e-01 | 96.7% | 98.4% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.74 | 60.0 | 5.80e-01 | 90.0% | 98.5% |
| 6xm1A02 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.73 | 63.0 | 5.20e-01 | 100.0% | 53.1% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 64.0 | 5.78e-01 | 98.3% | 93.8% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 62.0 | 6.29e-01 | 95.0% | 100.0% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 62.0 | 6.15e-01 | 95.0% | 100.0% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 58.0 | 5.73e-01 | 95.0% | 83.1% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.72 | 63.0 | 6.03e-01 | 100.0% | 93.0% |
| 3qavA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.72 | 62.0 | 4.75e-01 | 100.0% | 42.1% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 63.0 | 5.53e-01 | 100.0% | 68.9% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.71 | 48.0 | 3.13e-01 | 71.7% | 19.8% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 48.0 | 4.30e-01 | 71.7% | 100.0% |
| 3fcnA00 | 1.20.1220.20 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Uncharcterised protein PF01724 | 0.71 | 56.0 | 4.20e-01 | 91.7% | 34.2% |
| 1z23A00 | 1.20.120.830 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain | 0.70 | 62.0 | 4.54e-01 | 100.0% | 57.1% |
| 1yq1A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.70 | 61.0 | 4.99e-01 | 98.3% | 52.7% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.70 | 61.0 | 6.15e-01 | 96.7% | 100.0% |
| 2c2aA01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.70 | 61.0 | 5.38e-01 | 100.0% | 76.7% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.70 | 59.0 | 5.45e-01 | 95.0% | 94.8% |
| 2etnB01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.69 | 60.0 | 5.60e-01 | 98.3% | 77.6% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 53.0 | 5.54e-01 | 90.0% | 90.7% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.69 | 56.0 | 5.69e-01 | 96.7% | 96.6% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.68 | 58.0 | 4.89e-01 | 96.7% | 57.3% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.68 | 54.0 | 5.13e-01 | 100.0% | 73.2% |
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.68 | 57.0 | 3.86e-01 | 100.0% | 24.7% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 60.0 | 5.53e-01 | 100.0% | 80.5% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 57.0 | 4.88e-01 | 96.7% | 100.0% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 57.0 | 5.09e-01 | 98.3% | 69.2% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.67 | 57.0 | 5.23e-01 | 96.7% | 93.8% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 56.0 | 5.46e-01 | 100.0% | 95.7% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 56.0 | 5.28e-01 | 98.3% | 76.6% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.67 | 56.0 | 5.25e-01 | 96.7% | 84.4% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.67 | 50.0 | 5.33e-01 | 86.7% | 94.1% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.67 | 56.0 | 4.23e-01 | 96.7% | 37.2% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.66 | 53.0 | 5.27e-01 | 95.0% | 87.1% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.66 | 56.0 | 5.27e-01 | 100.0% | 78.7% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 49.0 | 5.37e-01 | 96.7% | 100.0% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 54.0 | 5.10e-01 | 95.0% | 76.4% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.66 | 54.0 | 4.11e-01 | 100.0% | 36.9% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.65 | 54.0 | 5.34e-01 | 100.0% | 98.4% |
| 1fs0G02 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.65 | 55.0 | 4.85e-01 | 95.0% | 88.8% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 56.0 | 3.75e-01 | 96.7% | 25.3% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.65 | 54.0 | 4.16e-01 | 100.0% | 40.0% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.64 | 56.0 | 4.42e-01 | 100.0% | 47.7% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.64 | 56.0 | 5.21e-01 | 98.3% | 93.4% |
| 3ibpA01 | 1.20.58.850 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 55.0 | 5.24e-01 | 100.0% | 87.5% |
| 4fxxB01 | 6.10.140.1790 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 54.0 | 5.09e-01 | 93.3% | 93.1% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 48.0 | 5.06e-01 | 90.0% | 96.1% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 53.0 | 5.36e-01 | 98.3% | 98.3% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 55.0 | 4.68e-01 | 100.0% | 79.4% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 57.0 | 4.62e-01 | 100.0% | 71.8% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 52.0 | 5.01e-01 | 100.0% | 100.0% |
| 2b5dX02 | 1.20.1430.10 | Mainly Alpha › Up-down Bundle › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase, middle domain | 0.63 | 51.0 | 4.26e-01 | 96.7% | 50.0% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 53.0 | 5.26e-01 | 100.0% | 100.0% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 48.0 | 4.89e-01 | 96.7% | 89.7% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 51.0 | 4.93e-01 | 96.7% | 95.6% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.60 | 44.0 | 4.31e-01 | 88.3% | 74.6% |
| 1jb0K00 | 1.20.860.20 | Mainly Alpha › Up-down Bundle › Alpha-t-alpha › Photosystem I PsaK, reaction centre | 0.54 | 37.0 | 4.11e-01 | 86.7% | 93.5% |
| 4bf9A02 | 1.20.225.30 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Dihydrouridine synthase, C-terminal recognition domain | 0.53 | 40.0 | 3.79e-01 | 81.7% | 100.0% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.52 | 43.0 | 3.71e-01 | 95.0% | 56.7% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4827920 | 4268.2.1.2 ↗ | alpha duplicates or obligate multimers › EspA/CesA-like › EspA chaperone CesA › EspA chaperone CesA › Rx_N | 0.82 | 71.0 | 6.72e-01 | 96.7% | 85.9% |
| 4001550 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.79 | 65.0 | 6.04e-01 | 90.0% | 73.3% |
| 3897625 | 3755.4.1.71 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › WWC1 | 0.78 | 68.0 | 5.28e-01 | 100.0% | 49.6% |
| 3264174 | 622.4.1.58 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › PF26756 | 0.75 | 65.0 | 5.95e-01 | 98.3% | 77.5% |
| 3663990 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.75 | 61.0 | 5.85e-01 | 91.7% | 82.9% |
| 3951222 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.74 | 65.0 | 6.22e-01 | 100.0% | 84.3% |
| 3470779 | 3755.3.1.420 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PTHB1_hp | 0.74 | 62.0 | 4.21e-01 | 98.3% | 26.0% |
| 3785572 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.74 | 62.0 | 5.23e-01 | 95.0% | 56.0% |
| 3473220 | 5086.1.1.209 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › LIN9_C | 0.73 | 64.0 | 5.21e-01 | 100.0% | 79.1% |
| 3864929 | 192.29.1.1 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom | 0.73 | 63.0 | 5.60e-01 | 96.7% | 69.4% |
| 3925617 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.72 | 58.0 | 5.25e-01 | 90.0% | 94.1% |
| 5071381 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.72 | 61.0 | 5.20e-01 | 100.0% | 56.2% |
| 3849547 | 4992.1.1.25 ↗ | extended segments › RelB-like › RelB-like › RelB-like › SHCBP_N | 0.72 | 61.0 | 5.32e-01 | 96.7% | 64.2% |
| 3794016 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.72 | 61.0 | 4.11e-01 | 100.0% | 28.6% |
| 3622196 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.72 | 63.0 | 5.08e-01 | 100.0% | 59.2% |
| 3516570 | 192.29.1.1 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom | 0.72 | 62.0 | 5.66e-01 | 96.7% | 73.8% |
| 3694629 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.71 | 63.0 | 5.74e-01 | 100.0% | 83.7% |
| 3198510 | 5069.1.1.4 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ferric_reduct | 0.71 | 61.0 | 3.99e-01 | 100.0% | 26.1% |
| 3766572 | 4177.1.1.112 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › bMERB_dom | 0.70 | 59.0 | 4.26e-01 | 93.3% | 74.0% |
| 3401938 | 3602.1.1.14 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › DUF733 | 0.70 | 61.0 | 5.68e-01 | 100.0% | 82.7% |
| 3215306 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.69 | 61.0 | 5.43e-01 | 98.3% | 69.4% |
| 4684 | 192.15.1.2 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r | 0.69 | 56.0 | 5.48e-01 | 100.0% | 80.0% |
| 3315495 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.69 | 60.0 | 5.39e-01 | 100.0% | 74.1% |
| 3692897 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.69 | 61.0 | 5.69e-01 | 100.0% | 88.0% |
| 2661271 | 192.29.1.1 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom | 0.69 | 59.0 | 5.83e-01 | 100.0% | 92.3% |
| 3884649 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.68 | 60.0 | 5.12e-01 | 96.7% | 70.5% |
| 5054469 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.68 | 60.0 | 5.02e-01 | 98.3% | 74.3% |
| 3915380 | 192.5.1.25 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › PTHB1_hp | 0.68 | 61.0 | 5.29e-01 | 100.0% | 65.6% |
| 3564741 | 3860.1.1.322 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › KELK | 0.68 | 60.0 | 3.70e-01 | 100.0% | 17.0% |
| 3231243 | 4177.1.1.10 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH | 0.68 | 60.0 | 3.86e-01 | 100.0% | 21.4% |
| 3861615 | 150.1.1.190 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › SAP130_C | 0.68 | 61.0 | 5.13e-01 | 100.0% | 62.0% |
| 4247116 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.68 | 59.0 | 4.89e-01 | 98.3% | 54.5% |
| 3839497 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.68 | 57.0 | 5.14e-01 | 96.7% | 68.2% |
| 3928718 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 61.0 | 4.60e-01 | 100.0% | 44.3% |
| 3514283 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 58.0 | 4.38e-01 | 100.0% | 40.6% |
| 3272451 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 58.0 | 4.60e-01 | 98.3% | 81.6% |
| 3609224 | 3602.1.1.3 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Enkurin | 0.67 | 56.0 | 5.19e-01 | 100.0% | 72.5% |
| 3258925 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.66 | 59.0 | 5.62e-01 | 100.0% | 88.6% |
| 3231462 | 632.8.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C | 0.66 | 59.0 | 5.11e-01 | 100.0% | 65.6% |
| 3784740 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.65 | 59.0 | 5.45e-01 | 100.0% | 84.0% |
| 3768858 | 192.29.1.1 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom | 0.65 | 55.0 | 4.83e-01 | 100.0% | 63.2% |
| 3594486 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 57.0 | 4.59e-01 | 100.0% | 51.7% |
| 222991 | 192.10.1.1 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › DksA_N | 0.64 | 56.0 | 4.91e-01 | 100.0% | 67.4% |
| 3440543 | 207.1.1.96 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 | 0.64 | 53.0 | 3.23e-01 | 100.0% | 12.8% |
| 3110288 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.64 | 56.0 | 5.21e-01 | 100.0% | 97.4% |
| 3200559 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.63 | 47.0 | 3.00e-01 | 83.3% | 95.2% |
| 4025776 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.62 | 55.0 | 4.76e-01 | 100.0% | 63.2% |
| 3491651 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.62 | 54.0 | 3.77e-01 | 95.0% | 31.9% |
| 3926706 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.61 | 49.0 | 4.31e-01 | 100.0% | 59.0% |
| 3277923 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.60 | 50.0 | 4.55e-01 | 95.0% | 85.5% |
| 3569033 | 3538.1.1.8 ↗ | extended segments › MerF › MerF › MerF › PF28754 | 0.59 | 47.0 | 4.89e-01 | 93.3% | 94.5% |
| 3314055 | 5042.1.1.0 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region | 0.53 | 46.0 | 4.29e-01 | 96.7% | 100.0% |
D2
medium
residues 67-108
Domain cluster:
representative
CATH (82)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.79 | 66.0 | 6.30e-01 | 97.6% | 90.0% |
| 2cuwA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.77 | 65.0 | 5.31e-01 | 100.0% | 97.6% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.72 | 57.0 | 4.98e-01 | 100.0% | 68.4% |
| 4ybnB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.71 | 62.0 | 3.96e-01 | 100.0% | 24.9% |
| 4xhyA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 60.0 | 4.04e-01 | 100.0% | 34.2% |
| 6b9tF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 53.0 | 3.95e-01 | 100.0% | 33.0% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 53.0 | 3.51e-01 | 100.0% | 20.2% |
| 3ec6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 59.0 | 4.23e-01 | 100.0% | 39.8% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.68 | 56.0 | 3.86e-01 | 100.0% | 29.3% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 59.0 | 4.04e-01 | 100.0% | 34.4% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 59.0 | 4.22e-01 | 100.0% | 39.7% |
| 1flmA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 58.0 | 4.20e-01 | 100.0% | 45.1% |
| 1cauA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 52.0 | 3.43e-01 | 100.0% | 19.9% |
| 6l4cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 52.0 | 3.41e-01 | 100.0% | 19.6% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.67 | 54.0 | 4.41e-01 | 100.0% | 53.3% |
| 2htiA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.67 | 57.0 | 4.11e-01 | 100.0% | 40.5% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 58.0 | 4.36e-01 | 100.0% | 65.7% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.67 | 57.0 | 3.69e-01 | 100.0% | 25.6% |
| 2ig6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 57.0 | 3.98e-01 | 100.0% | 36.4% |
| 5u55A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 52.0 | 3.77e-01 | 100.0% | 30.3% |
| 6l9iA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 52.0 | 3.40e-01 | 100.0% | 20.6% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.65 | 53.0 | 4.00e-01 | 100.0% | 52.9% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.65 | 56.0 | 4.15e-01 | 100.0% | 41.4% |
| 2r0xA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 56.0 | 3.83e-01 | 100.0% | 35.3% |
| 5cadA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 50.0 | 3.25e-01 | 100.0% | 18.7% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 55.0 | 3.90e-01 | 100.0% | 36.5% |
| 5of3A00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.65 | 51.0 | 3.16e-01 | 100.0% | 13.5% |
| 4yo1A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 55.0 | 4.40e-01 | 100.0% | 50.6% |
| 3ddcB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.65 | 52.0 | 3.74e-01 | 95.2% | 72.9% |
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.64 | 51.0 | 3.30e-01 | 100.0% | 18.5% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 53.0 | 4.48e-01 | 100.0% | 93.4% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.64 | 53.0 | 4.71e-01 | 100.0% | 63.6% |
| 2avxA00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.64 | 45.0 | 3.14e-01 | 83.3% | 76.0% |
| 5tr9A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 52.0 | 4.14e-01 | 100.0% | 62.5% |
| 4o9gA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 49.0 | 3.51e-01 | 100.0% | 27.5% |
| 3cb0D00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 54.0 | 3.68e-01 | 100.0% | 34.2% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.63 | 50.0 | 4.08e-01 | 100.0% | 52.1% |
| 1d0nA06 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.63 | 46.0 | 3.39e-01 | 100.0% | 27.6% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.62 | 51.0 | 3.95e-01 | 100.0% | 55.0% |
| 3cp7A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 50.0 | 3.88e-01 | 100.0% | 46.8% |
| 2qsdB02 | 3.50.100.10 | Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain | 0.62 | 50.0 | 4.11e-01 | 100.0% | 48.7% |
| 1nh8A03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 49.0 | 4.46e-01 | 100.0% | 95.5% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.62 | 50.0 | 4.29e-01 | 100.0% | 68.8% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 52.0 | 3.65e-01 | 97.6% | 40.9% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.61 | 52.0 | 3.72e-01 | 100.0% | 63.9% |
| 1b1zA02 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 48.0 | 3.56e-01 | 97.6% | 74.3% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.61 | 47.0 | 3.78e-01 | 100.0% | 48.6% |
| 2n59A00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 49.0 | 3.88e-01 | 100.0% | 48.5% |
| 2rftA02 | 3.90.209.20 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain | 0.61 | 49.0 | 3.14e-01 | 100.0% | 36.4% |
| 2pjyC00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.60 | 49.0 | 4.18e-01 | 100.0% | 65.8% |
| 6x3aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 50.0 | 3.85e-01 | 100.0% | 51.9% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 48.0 | 3.51e-01 | 100.0% | 49.3% |
| 1xreA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.60 | 43.0 | 3.37e-01 | 100.0% | 32.1% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.60 | 45.0 | 3.24e-01 | 100.0% | 33.7% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.60 | 45.0 | 3.79e-01 | 100.0% | 57.3% |
| 1dyqA02 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.60 | 46.0 | 3.43e-01 | 100.0% | 73.2% |
| 7bjkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.59 | 43.0 | 3.36e-01 | 100.0% | 32.7% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 47.0 | 3.32e-01 | 100.0% | 48.4% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 44.0 | 4.06e-01 | 100.0% | 100.0% |
| 3q8pB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 49.0 | 3.73e-01 | 100.0% | 63.0% |
| 6heiA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 51.0 | 2.98e-01 | 100.0% | 14.4% |
| 3d0jA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 41.0 | 3.07e-01 | 100.0% | 26.8% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 39.0 | 2.65e-01 | 73.8% | 54.2% |
| 4n0rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 3.82e-01 | 100.0% | 51.8% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 3.32e-01 | 100.0% | 36.2% |
| 4issA03 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.56 | 44.0 | 3.27e-01 | 100.0% | 62.0% |
| 1l3lA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 41.0 | 2.78e-01 | 81.0% | 92.9% |
| 4r70B03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.56 | 40.0 | 2.91e-01 | 83.3% | 94.6% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.55 | 40.0 | 2.92e-01 | 83.3% | 77.3% |
| 7pupA01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 42.0 | 2.82e-01 | 100.0% | 19.1% |
| 6cc0A01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.55 | 39.0 | 2.84e-01 | 88.1% | 39.0% |
| 1xdnA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.54 | 48.0 | 3.22e-01 | 100.0% | 42.6% |
| 1te5A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 43.0 | 2.77e-01 | 100.0% | 17.8% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.54 | 42.0 | 3.23e-01 | 100.0% | 46.7% |
| 5jpnB04 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 3.25e-01 | 100.0% | 52.9% |
| 2vqaC01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 2.96e-01 | 100.0% | 30.5% |
| 4harA00 | 3.10.50.50 | Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein | 0.53 | 44.0 | 3.46e-01 | 100.0% | 91.8% |
| 6l4lA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 44.0 | 3.31e-01 | 100.0% | 98.3% |
| 4q0jA03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.52 | 40.0 | 2.86e-01 | 88.1% | 38.0% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 39.0 | 3.60e-01 | 97.6% | 97.1% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.51 | 36.0 | 2.67e-01 | 85.7% | 34.0% |
| 2czrA02 | 3.90.79.30 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › TBP-interacting protein, C-terminal domain | 0.51 | 36.0 | 2.79e-01 | 100.0% | 29.2% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.77 | 66.0 | 6.30e-01 | 100.0% | 92.0% |
| 5012895 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.77 | 63.0 | 5.95e-01 | 100.0% | 90.9% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.76 | 66.0 | 6.49e-01 | 100.0% | 95.6% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.76 | 63.0 | 5.79e-01 | 100.0% | 88.1% |
| 146929 | 3115.3.1.1 ↗ | a+b two layers › GP2-like › P56 › P56 › UDG-inhib_P56 | 0.76 | 63.0 | 5.89e-01 | 100.0% | 76.8% |
| 4160542 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.75 | 62.0 | 5.73e-01 | 100.0% | 89.7% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.74 | 63.0 | 6.19e-01 | 100.0% | 95.6% |
| 3975705 | 3115.6.1.0 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon | 0.74 | 63.0 | 6.06e-01 | 100.0% | 86.0% |
| 3968122 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.74 | 63.0 | 6.19e-01 | 100.0% | 95.6% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.74 | 61.0 | 4.69e-01 | 100.0% | 49.5% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.73 | 60.0 | 5.27e-01 | 100.0% | 72.9% |
| 5081134 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.73 | 62.0 | 5.59e-01 | 100.0% | 80.0% |
| 4007508 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.73 | 62.0 | 5.97e-01 | 100.0% | 86.0% |
| 5011497 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.73 | 62.0 | 4.00e-01 | 100.0% | 21.0% |
| 3679515 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.73 | 55.0 | 5.41e-01 | 85.7% | 95.6% |
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.71 | 60.0 | 5.03e-01 | 100.0% | 61.3% |
| 3911204 | 382.1.1.16 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › CD59 | 0.70 | 57.0 | 4.87e-01 | 100.0% | 54.7% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.69 | 54.0 | 5.28e-01 | 100.0% | 96.0% |
| 4995671 | 3115.1.1.12 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 | 0.68 | 56.0 | 5.38e-01 | 100.0% | 88.0% |
| 3390562 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.68 | 57.0 | 4.95e-01 | 100.0% | 64.3% |
| 3213931 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.68 | 56.0 | 4.13e-01 | 100.0% | 49.2% |
| 3963821 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.68 | 55.0 | 3.49e-01 | 100.0% | 16.4% |
| 4959407 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.67 | 57.0 | 5.45e-01 | 100.0% | 86.0% |
| 5026373 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.66 | 52.0 | 4.03e-01 | 97.6% | 98.2% |
| 3917143 | 304.100.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like | 0.66 | 55.0 | 5.03e-01 | 100.0% | 96.7% |
| 3488019 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.66 | 55.0 | 3.89e-01 | 100.0% | 50.0% |
| 5075402 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.66 | 51.0 | 3.24e-01 | 100.0% | 16.1% |
| 3744271 | 3662.1.1.3 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC4 | 0.66 | 48.0 | 3.53e-01 | 81.0% | 39.2% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.65 | 50.0 | 4.43e-01 | 97.6% | 96.0% |
| 5081419 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.65 | 53.0 | 3.29e-01 | 100.0% | 17.0% |
| 3739303 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.65 | 53.0 | 3.99e-01 | 100.0% | 48.3% |
| 4155354 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.65 | 52.0 | 3.93e-01 | 100.0% | 40.0% |
| 3958897 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.65 | 53.0 | 3.97e-01 | 100.0% | 35.0% |
| 3258393 | 1.1.2.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF30270 | 0.64 | 55.0 | 3.91e-01 | 100.0% | 48.9% |
| 5010744 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 50.0 | 4.50e-01 | 95.2% | 100.0% |
| 3672250 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.64 | 53.0 | 3.53e-01 | 100.0% | 23.2% |
| 4944470 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.64 | 52.0 | 3.30e-01 | 100.0% | 18.0% |
| 3957780 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.63 | 46.0 | 3.09e-01 | 81.0% | 88.6% |
| 5046039 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.63 | 53.0 | 3.95e-01 | 100.0% | 46.1% |
| 3218957 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.62 | 52.0 | 3.80e-01 | 100.0% | 34.8% |
| 3236430 | 1.13.1.0 ↗ | beta barrels › cradle loop barrel › Arginine N-succinyltransferase alpha chain C-terminal domain › Arginine N-succinyltransferase alpha chain C-terminal domain | 0.62 | 53.0 | 4.94e-01 | 100.0% | 92.7% |
| 3446121 | 109.4.1.3478 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, Eplus_motif, E_motif, TPR_24 | 0.62 | 53.0 | 2.94e-01 | 100.0% | 13.5% |
| 4371334 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.61 | 51.0 | 3.99e-01 | 100.0% | 43.2% |
| 4331814 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.61 | 47.0 | 3.71e-01 | 100.0% | 45.2% |
| 3704468 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 47.0 | 3.67e-01 | 95.2% | 93.6% |
| 3510118 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.61 | 50.0 | 4.67e-01 | 100.0% | 74.5% |
| 4490981 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.61 | 47.0 | 3.72e-01 | 100.0% | 47.3% |
| 3356833 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.60 | 51.0 | 2.82e-01 | 100.0% | 14.3% |
| 3404615 | 382.1.1.14 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › DUF753 | 0.60 | 45.0 | 3.74e-01 | 100.0% | 43.5% |
| 3478979 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.59 | 42.0 | 3.11e-01 | 81.0% | 48.5% |
| 3679857 | 109.4.1.2337 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 | 0.59 | 50.0 | 2.95e-01 | 100.0% | 23.5% |
| 5034119 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 43.0 | 2.81e-01 | 78.6% | 60.5% |
| 3802249 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.59 | 49.0 | 2.79e-01 | 100.0% | 16.0% |
| 5049285 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.58 | 45.0 | 3.02e-01 | 100.0% | 19.6% |
| 3705856 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.58 | 47.0 | 2.95e-01 | 100.0% | 14.0% |
| 3831946 | 109.4.1.1476 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif | 0.58 | 49.0 | 2.75e-01 | 100.0% | 13.8% |
| 3311892 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.58 | 49.0 | 2.90e-01 | 100.0% | 23.0% |
| 4946228 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 44.0 | 3.19e-01 | 85.7% | 72.3% |
| 3581044 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.58 | 47.0 | 3.95e-01 | 100.0% | 49.4% |
| 3829568 | 109.4.1.1383 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif | 0.58 | 48.0 | 2.71e-01 | 100.0% | 15.4% |
| 3378740 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.58 | 49.0 | 2.63e-01 | 100.0% | 9.3% |
| 3302171 | 11.10.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › Sina_TRAF | 0.58 | 41.0 | 3.03e-01 | 81.0% | 47.4% |
| 3315113 | 109.4.1.1285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif | 0.58 | 48.0 | 2.94e-01 | 100.0% | 30.8% |
| 3320430 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 47.0 | 3.46e-01 | 100.0% | 71.5% |
| 3911249 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.58 | 45.0 | 3.70e-01 | 100.0% | 65.3% |
| 3700429 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.58 | 41.0 | 3.01e-01 | 83.3% | 25.0% |
| 4030283 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.57 | 45.0 | 2.64e-01 | 95.2% | 56.5% |
| 4146398 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.57 | 41.0 | 2.81e-01 | 81.0% | 78.8% |
| 3825377 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.57 | 47.0 | 2.64e-01 | 100.0% | 12.8% |
| 3434515 | 109.4.1.2925 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, PPR_long, E_motif | 0.57 | 47.0 | 2.63e-01 | 100.0% | 12.6% |
| 3802543 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.57 | 45.0 | 2.55e-01 | 97.6% | 15.9% |
| 3677917 | 109.3.1.320 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DYW_deaminase | 0.56 | 46.0 | 3.40e-01 | 100.0% | 68.9% |
| None | — | 0.56 | 42.0 | 2.81e-01 | 88.1% | 97.1% | |
| 3929515 | 382.1.1.21 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › PF28966 | 0.56 | 48.0 | 3.63e-01 | 100.0% | 58.1% |
| 3820762 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.56 | 45.0 | 2.57e-01 | 97.6% | 16.8% |
| 3499188 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.56 | 43.0 | 3.56e-01 | 100.0% | 67.0% |
| 3802293 | 109.4.1.2064 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif, TPR_24 | 0.56 | 45.0 | 2.66e-01 | 100.0% | 23.2% |
| 3224071 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.55 | 46.0 | 3.46e-01 | 100.0% | 57.4% |
| 4472409 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.55 | 42.0 | 2.81e-01 | 85.7% | 93.5% |
| 4086554 | 11.10.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › Sina_TRAF | 0.53 | 45.0 | 3.24e-01 | 100.0% | 43.7% |
| 4410522 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.52 | 36.0 | 2.65e-01 | 85.7% | 24.8% |
| 3399432 | 382.1.1.14 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › DUF753 | 0.52 | 43.0 | 3.60e-01 | 100.0% | 52.5% |
| 3268634 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.52 | 42.0 | 3.00e-01 | 100.0% | 40.0% |
| 3684103 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.50 | 39.0 | 2.19e-01 | 88.1% | 21.2% |
| 4944314 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 35.0 | 2.69e-01 | 83.3% | 25.6% |