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OQ921348.1__WIT28175.1__X__00067

Bact-Vir

OQ921348.1__WIT28175.1__X__00067

Identity

Accession:
OQ921348 ↗
Kingdom:
phage

Quality

87.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_SPbetaL8

TaxID: 3053442

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-107
PDB
Domain cluster: rep: JBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00015__D6-97
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27067.1 best YomF_N 103.8 5.20e-30 100.0% 94.1%
D2 medium residues 114-176
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27068.1 best YomF_M 158.3 5.40e-47 98.4% 100.0%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.86 56.0 4.01e-01 74.6% 25.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3520437 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.64 49.0 3.47e-01 81.0% 36.3%
D3 medium residues 177-223
PDB
Domain cluster: rep: ON107264.1__UOX38297.1__X__00159__D5-50
D4 medium residues 231-273
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27069.1 best YomF_C 110.7 3.10e-32 100.0% 95.6%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uzmB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 41.0 2.68e-01 93.0% 42.2%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4367125 2003.1.8.4 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N 0.54 44.0 3.52e-01 93.0% 65.9%
5079875 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.53 43.0 2.61e-01 93.0% 27.5%