←Back to structures
OQ921348.1__WIT28180.1__X__00072
Bact-VirOQ921348.1__WIT28180.1__X__00072
Identity
- Accession:
- OQ921348 ↗
- Kingdom:
- phage
Quality
80.9
mean pLDDT
Taxonomy
TaxID: 3053442
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 137-149_162-276
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.66 | 47.0 | 4.24e-01 | 72.7% | 66.1% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.62 | 48.0 | 4.54e-01 | 82.0% | 78.1% |
| 3anzC00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.59 | 48.0 | 3.71e-01 | 88.3% | 94.2% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.58 | 45.0 | 4.35e-01 | 99.2% | 72.4% |
| 3w1eA02 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.57 | 41.0 | 3.77e-01 | 75.0% | 95.5% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.57 | 45.0 | 4.29e-01 | 82.8% | 78.2% |
| 3sybA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.57 | 51.0 | 3.61e-01 | 100.0% | 46.6% |
| 6a5gA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 38.0 | 3.77e-01 | 100.0% | 66.2% |
| 3dm8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 34.0 | 3.42e-01 | 100.0% | 58.5% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.54 | 47.0 | 3.75e-01 | 100.0% | 81.0% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 27.0 | 3.60e-01 | 85.2% | 96.8% |
| 2gexA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 35.0 | 3.42e-01 | 85.9% | 59.6% |
| 4c00A04 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.53 | 41.0 | 3.15e-01 | 83.6% | 68.8% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.52 | 45.0 | 3.21e-01 | 96.9% | 29.8% |
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.52 | 41.0 | 3.63e-01 | 85.2% | 79.4% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 35.0 | 3.42e-01 | 100.0% | 62.6% |
| 2oojA00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.51 | 43.0 | 4.33e-01 | 98.4% | 90.8% |
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.51 | 44.0 | 3.11e-01 | 100.0% | 29.9% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.51 | 43.0 | 3.79e-01 | 95.3% | 61.7% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.50 | 41.0 | 4.11e-01 | 89.8% | 85.3% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 33.0 | 3.33e-01 | 100.0% | 64.8% |
| 3fsdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 36.0 | 3.74e-01 | 97.7% | 78.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3787225 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.68 | 49.0 | 4.25e-01 | 74.2% | 69.7% |
| 3484227 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.60 | 43.0 | 3.95e-01 | 73.4% | 65.9% |
| None | — | 0.59 | 48.0 | 3.71e-01 | 87.5% | 94.2% | |
| 1943 | 11.13.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › Leukocidin | 0.59 | 48.0 | 3.69e-01 | 87.5% | 94.2% |
| 3980178 | 7503.1.1.13 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › Lipoprotein_16 | 0.56 | 40.0 | 3.74e-01 | 75.8% | 87.6% |
| 3493155 | 5087.3.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd | 0.55 | 49.0 | 3.71e-01 | 100.0% | 71.1% |
| 4980058 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.54 | 35.0 | 3.49e-01 | 100.0% | 62.2% |
| 3484305 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.54 | 28.0 | 3.66e-01 | 75.8% | 96.9% |
| 3664957 | 5084.5.1.57 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF28611 | 0.54 | 34.0 | 2.56e-01 | 84.4% | 23.9% |
| 4962810 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.54 | 35.0 | 3.53e-01 | 99.2% | 63.0% |
| 3718960 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.51 | 42.0 | 3.69e-01 | 93.0% | 78.6% |
| 3581448 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.50 | 34.0 | 3.54e-01 | 85.9% | 75.7% |
D2
medium
residues 39-98
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 47.0 | 4.83e-01 | 71.7% | 75.0% |
| 1vw4L01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.56 | 38.0 | 3.01e-01 | 71.7% | 44.4% |
| 1kf6C00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.56 | 44.0 | 3.60e-01 | 93.3% | 69.2% |
| 4c08A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.51 | 41.0 | 2.98e-01 | 93.3% | 73.8% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 38.0 | 3.20e-01 | 85.0% | 76.6% |
| 3p42A02 | 6.10.250.2280 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.50 | 34.0 | 3.25e-01 | 70.0% | 60.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3614667 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 47.0 | 2.98e-01 | 100.0% | 44.3% |
| 4129499 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.51 | 41.0 | 3.45e-01 | 90.0% | 53.3% |
| 3784538 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 41.0 | 2.75e-01 | 98.3% | 56.4% |