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OQ921725.1__WGV35849.1__SEA_FRANKENWEENIE_163__00159
Bact-VirOQ921725.1__WGV35849.1__SEA_FRANKENWEENIE_163__00159
Identity
- Accession:
- OQ921725 ↗
- Kingdom:
- phage
Quality
72.5
mean pLDDT
Taxonomy
TaxID: 2969429
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-83
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mjtB01 | 3.90.340.10 | Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 | 0.78 | 53.0 | 3.99e-01 | 70.9% | 31.0% |
| 1jwjA01 | 3.90.340.10 | Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 | 0.72 | 51.0 | 3.58e-01 | 74.5% | 25.4% |
| 6ui4A02 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 64.0 | 4.61e-01 | 100.0% | 41.9% |
| 7y11B01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.71 | 50.0 | 4.82e-01 | 74.5% | 65.1% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.70 | 47.0 | 3.98e-01 | 96.4% | 41.9% |
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 45.0 | 4.23e-01 | 94.5% | 54.4% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.69 | 48.0 | 4.35e-01 | 72.7% | 59.5% |
| 2oq1A02 | 1.10.930.10 | Mainly Alpha › Orthogonal Bundle › Syk Kinase; Chain A, domain 2 › Syk Kinase; Chain A, domain 2 | 0.68 | 45.0 | 4.91e-01 | 74.5% | 84.4% |
| 2of5H00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.65 | 56.0 | 4.61e-01 | 96.4% | 59.0% |
| 3urzA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 49.0 | 3.33e-01 | 81.8% | 27.7% |
| 1e94E03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 45.0 | 3.75e-01 | 78.2% | 50.9% |
| 5t3wA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 45.0 | 3.37e-01 | 74.5% | 80.3% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 53.0 | 4.76e-01 | 100.0% | 81.9% |
| 2pbiA02 | 1.10.1240.60 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.63 | 45.0 | 3.71e-01 | 76.4% | 71.3% |
| 1n69B00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.63 | 43.0 | 3.80e-01 | 72.7% | 95.0% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.62 | 51.0 | 4.59e-01 | 90.9% | 74.0% |
| 3qxzA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.62 | 47.0 | 4.57e-01 | 81.8% | 76.7% |
| 6jrpA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.61 | 47.0 | 4.63e-01 | 85.5% | 77.0% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 55.0 | 4.11e-01 | 100.0% | 70.7% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 40.0 | 4.25e-01 | 78.2% | 82.6% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 42.0 | 4.02e-01 | 90.9% | 63.5% |
| 1rajA01 | 4.10.880.10 | Few Secondary Structures › Irregular › Poliovirus 3D polymerase; domain 1 (Nucleotidyltransferase) › Poliovirus 3D polymerase Domain 1 (Nucleotidyltransferase) | 0.61 | 40.0 | 4.42e-01 | 92.7% | 86.4% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.60 | 42.0 | 3.53e-01 | 81.8% | 41.8% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 43.0 | 3.96e-01 | 90.9% | 59.4% |
| 2r7rA03 | 1.10.10.1990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Viral RNA-directed RNA polymerase, 4-helical domain | 0.60 | 45.0 | 4.10e-01 | 90.9% | 59.2% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.59 | 44.0 | 4.02e-01 | 83.6% | 59.5% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 42.0 | 4.45e-01 | 100.0% | 89.4% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 43.0 | 4.29e-01 | 80.0% | 77.6% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.59 | 36.0 | 3.43e-01 | 74.5% | 50.0% |
| 6f1eA01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 51.0 | 3.87e-01 | 100.0% | 61.2% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.58 | 50.0 | 4.38e-01 | 98.2% | 61.6% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 42.0 | 3.20e-01 | 90.9% | 33.9% |
| 3e21A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 34.0 | 3.76e-01 | 74.5% | 77.5% |
| 1oaiA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 40.0 | 3.93e-01 | 70.9% | 66.1% |
| 6z01B03 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.57 | 46.0 | 3.49e-01 | 98.2% | 87.0% |
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.57 | 43.0 | 4.44e-01 | 87.3% | 90.6% |
| 1l8nA03 | 3.90.1330.10 | Alpha Beta › Alpha-Beta Complex › Alpha-d-glucuronidase, C-terminal Domain › Alpha-glucuronidase, C-terminal domain | 0.57 | 47.0 | 3.30e-01 | 96.4% | 75.1% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 40.0 | 3.86e-01 | 96.4% | 66.1% |
| 5vjhB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 46.0 | 3.21e-01 | 100.0% | 59.2% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.54 | 45.0 | 3.73e-01 | 94.5% | 49.5% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3617842 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.84 | 61.0 | 5.29e-01 | 76.4% | 52.5% |
| 3218921 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.82 | 59.0 | 4.63e-01 | 76.4% | 41.3% |
| 3617495 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.76 | 53.0 | 4.76e-01 | 78.2% | 51.9% |
| 4030224 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.76 | 54.0 | 4.06e-01 | 76.4% | 32.6% |
| 5040824 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.75 | 53.0 | 3.81e-01 | 74.5% | 55.2% |
| 3570117 | 375.6.1.2 ↗ | few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › PF31275 | 0.72 | 49.0 | 4.83e-01 | 83.6% | 66.7% |
| 4965039 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.71 | 51.0 | 3.30e-01 | 76.4% | 16.7% |
| 3981280 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.70 | 51.0 | 3.79e-01 | 80.0% | 55.2% |
| 3822 | 604.4.1.1 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP › AHSP | 0.68 | 50.0 | 4.33e-01 | 80.0% | 63.3% |
| 5060846 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.68 | 47.0 | 4.18e-01 | 70.9% | 72.0% |
| 3959510 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 57.0 | 3.34e-01 | 100.0% | 11.3% |
| 4574523 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.67 | 57.0 | 4.02e-01 | 100.0% | 52.4% |
| 5049973 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 47.0 | 3.46e-01 | 74.5% | 51.4% |
| 5061328 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.65 | 46.0 | 4.21e-01 | 72.7% | 72.9% |
| 4982092 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.65 | 48.0 | 3.47e-01 | 81.8% | 75.8% |
| 3617260 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.64 | 52.0 | 3.22e-01 | 98.2% | 14.9% |
| 4026684 | 192.20.1.7 ↗ | alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD › PF26729 | 0.62 | 43.0 | 3.49e-01 | 92.7% | 38.1% |
| 3180974 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 43.0 | 4.32e-01 | 72.7% | 74.5% |
| 3788827 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.61 | 43.0 | 4.19e-01 | 78.2% | 72.3% |
| 4544970 | 2002.1.1.17 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEPcase | 0.60 | 52.0 | 2.89e-01 | 100.0% | 32.8% |
| 4262321 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.60 | 46.0 | 3.96e-01 | 85.5% | 68.9% |
| 3227458 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.59 | 40.0 | 3.92e-01 | 100.0% | 65.0% |
| 4561057 | 5041.1.1.41 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › prePAAR_I | 0.58 | 49.0 | 4.64e-01 | 98.2% | 90.0% |
| 3181588 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.57 | 46.0 | 3.05e-01 | 96.4% | 31.9% |
| 3354836 | 109.4.1.1374 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, TPR_24 | 0.57 | 47.0 | 3.45e-01 | 100.0% | 31.8% |
| 4826095 | 5067.1.1.5 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Sterol-sensing | 0.56 | 43.0 | 3.64e-01 | 96.4% | 49.5% |
| 3364093 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 43.0 | 4.20e-01 | 100.0% | 81.5% |
| 4086475 | 3755.3.1.466 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CC_BshC | 0.55 | 41.0 | 3.06e-01 | 85.5% | 61.3% |
| 3440159 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.53 | 44.0 | 3.94e-01 | 98.2% | 83.5% |