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OQ921725.1__WGV35882.1__SEA_FRANKENWEENIE_196__00192
Bact-VirOQ921725.1__WGV35882.1__SEA_FRANKENWEENIE_196__00192
Identity
- Accession:
- OQ921725 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Taxonomy
TaxID: 2969429
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-121
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.70 | 31.0 | 4.69e-01 | 82.8% | 100.0% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 37.0 | 4.71e-01 | 81.0% | 85.9% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 43.0 | 4.79e-01 | 98.3% | 86.2% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 31.0 | 4.24e-01 | 85.3% | 91.4% |
| 8alzB08 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.60 | 45.0 | 4.39e-01 | 81.0% | 94.7% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.59 | 33.0 | 3.73e-01 | 76.7% | 71.8% |
| 3vwaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 36.0 | 4.03e-01 | 95.7% | 78.9% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 44.0 | 4.45e-01 | 95.7% | 78.0% |
| 3s95A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 37.0 | 4.16e-01 | 94.8% | 84.1% |
| 3dxpA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 33.0 | 3.65e-01 | 95.7% | 69.9% |
| 4jklA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 30.0 | 3.30e-01 | 82.8% | 58.9% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 31.0 | 3.79e-01 | 79.3% | 85.1% |
| 4euuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 35.0 | 3.96e-01 | 95.7% | 83.1% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 35.0 | 4.23e-01 | 85.3% | 97.3% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 36.0 | 3.82e-01 | 91.4% | 75.8% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.55 | 34.0 | 3.24e-01 | 88.8% | 52.2% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.54 | 34.0 | 3.26e-01 | 85.3% | 53.3% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 37.0 | 4.22e-01 | 90.5% | 98.8% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.54 | 31.0 | 3.38e-01 | 87.1% | 67.4% |
| 3b34A04 | 2.60.40.1840 | Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain | 0.52 | 35.0 | 3.73e-01 | 82.8% | 77.5% |
| 1qe0A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 48.0 | 3.52e-01 | 100.0% | 89.9% |
| 4gt8A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 40.0 | 3.91e-01 | 100.0% | 72.9% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 32.0 | 3.57e-01 | 94.8% | 82.2% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3626407 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.72 | 37.0 | 4.87e-01 | 81.9% | 89.2% |
| 4182456 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.68 | 40.0 | 4.59e-01 | 87.9% | 78.8% |
| 3613914 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.67 | 37.0 | 4.51e-01 | 81.9% | 82.7% |
| 4819006 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.63 | 35.0 | 2.65e-01 | 79.3% | 23.4% |
| 4995882 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.62 | 33.0 | 3.86e-01 | 87.9% | 74.7% |
| 3701882 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.61 | 47.0 | 5.17e-01 | 87.1% | 100.0% |
| 4183868 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.60 | 39.0 | 4.50e-01 | 100.0% | 94.9% |
| 5083776 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.60 | 41.0 | 4.46e-01 | 89.7% | 85.3% |
| 3929210 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.59 | 38.0 | 4.04e-01 | 96.6% | 72.4% |
| 4945969 | 230.6.1.0 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain | 0.59 | 31.0 | 3.34e-01 | 95.7% | 58.0% |
| 3517359 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.59 | 39.0 | 3.68e-01 | 84.5% | 55.7% |
| 4460725 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.58 | 31.0 | 3.39e-01 | 95.7% | 61.1% |
| 5055367 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.57 | 41.0 | 4.41e-01 | 94.0% | 90.5% |
| 5028291 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.57 | 30.0 | 3.33e-01 | 95.7% | 61.1% |
| 5009330 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.56 | 38.0 | 3.47e-01 | 100.0% | 50.6% |
| 5070793 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.56 | 30.0 | 3.33e-01 | 95.7% | 62.1% |
| 3316780 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.56 | 27.0 | 3.52e-01 | 99.1% | 85.0% |
| 3668393 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.56 | 32.0 | 4.04e-01 | 89.7% | 100.0% |
| 5057792 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.56 | 30.0 | 3.24e-01 | 95.7% | 61.1% |
| 5036923 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.54 | 46.0 | 3.05e-01 | 94.0% | 29.3% |
| 3383958 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 41.0 | 3.03e-01 | 80.2% | 34.8% |
| 3486748 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 39.0 | 4.11e-01 | 88.8% | 82.9% |
| 5064380 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.54 | 29.0 | 3.13e-01 | 95.7% | 59.6% |
| 2553760 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.54 | 39.0 | 4.04e-01 | 90.5% | 83.0% |
| 3410548 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.53 | 40.0 | 3.70e-01 | 77.6% | 93.1% |
| 3786625 | 109.4.1.165 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dsl1_C | 0.53 | 41.0 | 2.62e-01 | 81.0% | 23.2% |
| 4018584 | 6155.1.1.15 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF846 | 0.53 | 39.0 | 3.60e-01 | 76.7% | 76.7% |
| 4966555 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.52 | 47.0 | 4.05e-01 | 100.0% | 100.0% |
| 4389663 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.52 | 44.0 | 4.02e-01 | 95.7% | 80.6% |
| 3949230 | 5069.1.1.28 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DmsC | 0.51 | 46.0 | 4.34e-01 | 97.4% | 97.9% |
| 5051036 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.51 | 46.0 | 3.89e-01 | 100.0% | 61.0% |
| 4957831 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.50 | 36.0 | 3.23e-01 | 85.3% | 52.7% |