←Back to structures

OQ921725.1__WGV36008.1__SEA_FRANKENWEENIE_337__00322

Bact-Vir

OQ921725.1__WGV36008.1__SEA_FRANKENWEENIE_337__00322

Identity

Accession:
OQ921725 ↗
Kingdom:
phage

Quality

71.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_Frankenweenie

TaxID: 2969429

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-63
PDB
Domain cluster: rep: NC_070763.1__YP_010648960.1__PP303_gp080__00080__D503-543
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 67.0 5.90e-01 93.9% 80.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 69.0 6.49e-01 100.0% 98.3%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 6.55e-01 95.9% 100.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 67.0 6.33e-01 98.0% 100.0%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 67.0 6.46e-01 98.0% 100.0%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 66.0 5.49e-01 100.0% 60.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 68.0 6.16e-01 100.0% 95.3%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.75 68.0 5.16e-01 100.0% 54.1%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 67.0 6.11e-01 100.0% 86.2%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 67.0 6.23e-01 100.0% 98.4%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 65.0 6.18e-01 98.0% 98.3%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 67.0 6.16e-01 100.0% 93.5%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 66.0 6.33e-01 100.0% 98.2%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 67.0 6.52e-01 100.0% 98.1%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 65.0 5.13e-01 100.0% 52.0%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 65.0 5.87e-01 100.0% 82.4%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 65.0 5.15e-01 100.0% 57.1%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 65.0 5.62e-01 100.0% 78.7%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 63.0 5.69e-01 98.0% 92.5%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 63.0 5.93e-01 100.0% 98.4%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.72 64.0 5.53e-01 100.0% 64.9%
2budA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 62.0 5.05e-01 98.0% 62.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 64.0 5.97e-01 100.0% 93.3%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 5.82e-01 100.0% 95.0%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 62.0 5.65e-01 100.0% 79.7%
3dnsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 40.0 2.95e-01 91.8% 21.4%
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.66 54.0 4.75e-01 100.0% 61.6%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 5.17e-01 100.0% 100.0%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 50.0 3.92e-01 100.0% 40.8%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.81e-01 100.0% 91.8%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.60 47.0 3.89e-01 100.0% 47.8%
3jcuB02 3.10.680.10 Alpha Beta › Roll › Photosystem II CP47 reaction center protein › Photosystem II CP47 reaction center protein 0.57 48.0 3.35e-01 100.0% 33.5%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.51 41.0 3.27e-01 100.0% 94.1%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3840052 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 60.0 6.51e-01 91.8% 95.0%
3236896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 70.0 6.15e-01 93.9% 81.4%
4665407 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.81 65.0 6.53e-01 100.0% 86.0%
3931417 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 71.0 6.62e-01 98.0% 98.3%
3706998 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.56e-01 100.0% 80.0%
4024913 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 64.0 5.84e-01 100.0% 67.7%
3673944 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.79 70.0 4.93e-01 100.0% 37.6%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.78 65.0 6.46e-01 93.9% 88.0%
3533318 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.78 67.0 6.68e-01 98.0% 92.0%
3475756 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 69.0 6.01e-01 100.0% 80.0%
3491137 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 71.0 6.61e-01 100.0% 95.0%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 71.0 5.03e-01 100.0% 41.5%
3592540 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 69.0 6.46e-01 100.0% 81.7%
3789233 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 70.0 6.33e-01 100.0% 90.8%
3464886 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.77 69.0 6.49e-01 100.0% 88.3%
3494765 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.77 70.0 4.45e-01 100.0% 25.9%
3555931 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.77 69.0 5.17e-01 100.0% 42.6%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 69.0 6.47e-01 100.0% 95.0%
3496355 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 67.0 6.49e-01 95.9% 100.0%
3993250 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.77 68.0 6.54e-01 100.0% 87.3%
3393436 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.77 68.0 5.15e-01 100.0% 43.6%
3924338 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 69.0 6.11e-01 100.0% 81.4%
3296864 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.76 65.0 6.10e-01 100.0% 78.3%
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.76 63.0 5.27e-01 93.9% 55.0%
3936225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 68.0 6.03e-01 100.0% 84.3%
3200493 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.76 62.0 5.99e-01 93.9% 80.0%
3304602 4.1.1.427 ↗ beta barrels › SH3 › SH3 › SH3 › F-box 0.76 64.0 5.10e-01 100.0% 48.4%
4038705 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.76 68.0 6.17e-01 100.0% 98.5%
3621642 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 68.0 5.73e-01 100.0% 71.2%
3514453 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 66.0 5.73e-01 98.0% 74.7%
3600486 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 68.0 5.30e-01 100.0% 57.0%
3483363 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 6.09e-01 100.0% 81.5%
3275623 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 68.0 5.58e-01 100.0% 68.2%
3463181 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 5.84e-01 100.0% 68.6%
3246255 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 67.0 5.89e-01 98.0% 80.0%
3907870 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 68.0 5.74e-01 100.0% 72.2%
3397846 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.37e-01 100.0% 87.3%
3177469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 5.86e-01 100.0% 85.7%
3222195 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 67.0 6.07e-01 100.0% 89.2%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 5.35e-01 100.0% 51.6%
3737805 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 67.0 5.78e-01 100.0% 97.3%
3554994 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 67.0 5.41e-01 100.0% 65.2%
3747208 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 65.0 5.49e-01 98.0% 68.8%
3415045 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 65.0 5.75e-01 100.0% 87.1%
4014906 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 58.0 4.94e-01 91.8% 53.8%
3607307 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 65.0 5.75e-01 100.0% 90.0%
3784140 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 63.0 6.07e-01 95.9% 92.7%
3514345 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 65.0 5.94e-01 100.0% 98.5%
3267416 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 65.0 5.49e-01 100.0% 70.0%
3503780 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 64.0 5.85e-01 100.0% 86.2%
3659579 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 64.0 5.55e-01 100.0% 74.7%
3261986 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 64.0 6.06e-01 100.0% 94.9%
3723465 4.1.1.5 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.72 64.0 4.55e-01 100.0% 37.2%
3624441 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.72 64.0 4.55e-01 100.0% 35.7%
3778257 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.71 63.0 4.52e-01 100.0% 35.0%
3374228 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.66e-01 95.9% 91.7%
2803945 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.70 62.0 4.43e-01 100.0% 35.5%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 4.99e-01 100.0% 77.6%
3978624 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.68 59.0 4.37e-01 100.0% 37.7%
676 4999.1.1.1 ↗ beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX 0.66 54.0 5.07e-01 100.0% 75.0%
3213868 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 3.66e-01 100.0% 69.6%
D2 high residues 71-183
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3249186 221.7.1.3 ↗ a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 › UAE_UbL 0.51 36.0 3.60e-01 73.5% 99.1%
1505699 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.50 25.0 2.81e-01 89.4% 57.5%