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OQ938575.1__WIC88868.1__SEA_ONIONKNIGHT_62__00062

Bact-Vir

OQ938575.1__WIC88868.1__SEA_ONIONKNIGHT_62__00062

Identity

Accession:
OQ938575 ↗
Kingdom:
phage

Quality

79.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_OnionKnight

TaxID: 3049362

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 61-156
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.80 73.0 7.06e-01 99.0% 97.2%
5dvyA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.78 72.0 6.52e-01 100.0% 82.5%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.78 72.0 6.28e-01 100.0% 83.7%
1idpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.78 72.0 6.17e-01 100.0% 87.8%
3a76A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.78 71.0 6.27e-01 100.0% 84.2%
3ef8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.78 72.0 6.16e-01 100.0% 78.4%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.78 72.0 6.67e-01 100.0% 87.5%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.77 70.0 6.72e-01 100.0% 90.8%
3h51A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.76 69.0 6.02e-01 100.0% 81.0%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 68.0 6.29e-01 100.0% 92.6%
2owpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 67.0 6.08e-01 100.0% 84.5%
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 66.0 5.95e-01 100.0% 90.9%
3ebyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.73 67.0 5.68e-01 100.0% 83.7%
4fczA00 3.10.450.710 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC 0.72 65.0 5.23e-01 100.0% 74.9%
3dmcA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 64.0 5.72e-01 100.0% 84.3%
3dxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 63.0 5.94e-01 99.0% 94.0%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 61.0 5.88e-01 99.0% 90.8%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 61.0 5.86e-01 99.0% 91.7%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 61.0 5.85e-01 100.0% 89.3%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.62 39.0 4.40e-01 100.0% 85.9%
2lqvA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.61 44.0 4.45e-01 100.0% 74.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 37.0 4.34e-01 99.0% 93.7%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 35.0 4.10e-01 97.9% 86.4%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.55 41.0 3.05e-01 79.2% 98.0%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.54 29.0 3.58e-01 84.4% 100.0%
3f1tB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 39.0 3.50e-01 100.0% 57.4%
3rqbA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.50 38.0 2.86e-01 82.3% 97.3%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3289451 243.1.1.63 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6841 0.80 74.0 6.43e-01 100.0% 84.3%
3284315 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.80 73.0 6.64e-01 100.0% 90.4%
4472109 243.1.1.103 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF30257 0.79 73.0 6.71e-01 100.0% 85.0%
6410 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.78 72.0 6.23e-01 100.0% 81.9%
3278140 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.77 71.0 6.78e-01 100.0% 93.6%
3950922 243.1.1.80 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 0.77 70.0 6.50e-01 100.0% 87.5%
4032029 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.76 59.0 5.98e-01 90.6% 83.2%
134734 243.1.1.13 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD 0.76 69.0 6.02e-01 100.0% 81.0%
3952896 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.76 70.0 6.38e-01 100.0% 83.1%
3286225 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.75 69.0 6.19e-01 100.0% 89.2%
3351848 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.75 69.0 6.19e-01 100.0% 85.4%
3217508 243.1.1.97 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382_N 0.75 67.0 6.16e-01 100.0% 95.2%
2410469 243.1.1.16 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › AtzH-like 0.74 68.0 6.13e-01 100.0% 83.1%
170212 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.74 68.0 6.29e-01 100.0% 92.6%
3286088 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.74 68.0 6.27e-01 100.0% 91.7%
3217155 243.1.1.97 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382_N 0.74 67.0 5.75e-01 100.0% 77.3%
3953070 243.1.1.80 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 0.74 67.0 6.44e-01 100.0% 90.0%
4949068 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.74 66.0 6.36e-01 99.0% 91.8%
4878713 331.3.1.42 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Mtb12_C 0.73 66.0 6.55e-01 100.0% 97.0%
4930408 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.73 68.0 6.70e-01 100.0% 99.0%
5009713 243.1.1.1 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.73 66.0 5.56e-01 100.0% 86.9%
2834504 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.73 65.0 5.59e-01 100.0% 85.7%
3214215 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.73 65.0 6.14e-01 100.0% 83.3%
4977517 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.72 40.0 4.54e-01 97.9% 70.7%
3664186 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.72 65.0 5.52e-01 100.0% 79.2%
3731497 243.1.1.78 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26534 0.71 65.0 5.61e-01 100.0% 80.0%
4949878 243.1.1.23 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.71 63.0 6.07e-01 100.0% 91.8%
3725667 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.71 63.0 5.80e-01 100.0% 92.8%
5033517 243.1.1.23 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.71 63.0 6.21e-01 96.9% 95.0%
3338622 243.1.1.2 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.71 63.0 5.31e-01 99.0% 68.8%
3459974 243.1.1.45 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › S6PP_C 0.71 64.0 5.38e-01 100.0% 78.0%
3213693 243.1.1.75 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.70 62.0 5.62e-01 100.0% 86.7%
4104010 243.1.1.23 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.70 60.0 6.12e-01 94.8% 95.8%
3288112 243.1.1.69 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6459 0.70 63.0 6.05e-01 100.0% 91.7%
3688158 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.70 61.0 5.68e-01 100.0% 92.0%
2644388 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.69 61.0 5.59e-01 100.0% 82.3%
3282696 243.1.1.80 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 0.69 60.0 5.92e-01 100.0% 93.0%
3386770 243.1.1.8 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC 0.68 59.0 5.02e-01 97.9% 78.2%
1907494 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.68 61.0 5.88e-01 99.0% 90.8%
5044371 3414.1.1.13 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.67 43.0 3.97e-01 95.8% 50.4%
4049368 243.1.1.76 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF25976 0.67 61.0 5.70e-01 99.0% 89.6%
3506907 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 32.0 3.24e-01 83.3% 47.0%
3585214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 34.0 3.39e-01 99.0% 52.0%
5036065 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 40.0 4.38e-01 100.0% 92.0%
4337417 206.1.1.11 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.57 51.0 3.23e-01 100.0% 30.2%
4972821 523.1.1.3 ↗ a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › PF29994 0.57 43.0 3.97e-01 96.9% 63.3%
4337429 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 48.0 3.07e-01 99.0% 25.9%
3649311 9.2.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N 0.55 46.0 3.80e-01 100.0% 50.0%
3280330 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 50.0 3.28e-01 100.0% 30.5%
3711706 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 46.0 3.41e-01 99.0% 85.3%