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OQ938576.1__WIC88894.1__SEA_SHAGRAT_25__00025
Bact-VirOQ938576.1__WIC88894.1__SEA_SHAGRAT_25__00025
Identity
- Accession:
- OQ938576 ↗
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-84
Domain cluster:
rep: OQ859055.1__WNO48310.1__8C_0019__00019__D15-80
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.83 | 65.0 | 6.89e-01 | 92.6% | 93.4% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.82 | 72.0 | 7.35e-01 | 94.1% | 96.9% |
| 2wg5F02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.82 | 64.0 | 6.88e-01 | 89.7% | 96.6% |
| 3fvqA03 | 2.40.50.470 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 55.0 | 5.88e-01 | 83.8% | 84.5% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 57.0 | 5.91e-01 | 82.4% | 81.2% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 49.0 | 5.80e-01 | 72.1% | 100.0% |
| 2awnC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 55.0 | 5.90e-01 | 79.4% | 89.7% |
| 7k98B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 62.0 | 5.21e-01 | 89.7% | 81.6% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.75 | 56.0 | 5.59e-01 | 80.9% | 76.1% |
| 2vqeL00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 65.0 | 5.25e-01 | 94.1% | 62.9% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.74 | 62.0 | 6.06e-01 | 91.2% | 93.3% |
| 3u4zA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 63.0 | 5.39e-01 | 95.6% | 74.3% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.73 | 57.0 | 5.83e-01 | 85.3% | 89.6% |
| 1gd7A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 65.0 | 5.54e-01 | 100.0% | 89.0% |
| 1ckmA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 57.0 | 5.37e-01 | 98.5% | 69.9% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.72 | 56.0 | 5.55e-01 | 83.8% | 80.3% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 61.0 | 5.55e-01 | 94.1% | 82.4% |
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 63.0 | 5.81e-01 | 100.0% | 95.5% |
| 2xvsA00 | 2.40.50.550 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 64.0 | 4.76e-01 | 100.0% | 63.9% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 60.0 | 5.47e-01 | 95.6% | 82.6% |
| 2g7zA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.69 | 43.0 | 3.58e-01 | 94.1% | 35.8% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 46.0 | 4.57e-01 | 95.6% | 65.3% |
| 2asbA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 56.0 | 5.50e-01 | 89.7% | 97.3% |
| 5jpnC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 60.0 | 4.60e-01 | 98.5% | 59.2% |
| 1iyjB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 57.0 | 4.88e-01 | 95.6% | 77.2% |
| 3tdqA00 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.67 | 58.0 | 5.40e-01 | 97.1% | 81.4% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 56.0 | 4.88e-01 | 94.1% | 68.9% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 44.0 | 4.71e-01 | 72.1% | 85.7% |
| 1dynA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 37.0 | 3.12e-01 | 100.0% | 33.6% |
| 3zyyX03 | 3.10.20.880 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 50.0 | 4.69e-01 | 92.6% | 86.2% |
| 3j7yD01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 40.0 | 3.56e-01 | 80.9% | 44.3% |
| 3qwnD01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.59 | 49.0 | 4.88e-01 | 94.1% | 100.0% |
| 5yrzA01 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 42.0 | 3.67e-01 | 83.8% | 100.0% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 41.0 | 3.42e-01 | 83.8% | 95.4% |
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 35.0 | 3.27e-01 | 70.6% | 78.9% |
| 4i9xA00 | 2.60.40.3790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 2.99e-01 | 88.2% | 42.2% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 35.0 | 3.31e-01 | 72.1% | 85.9% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937684 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.88 | 73.0 | 7.69e-01 | 100.0% | 100.0% |
| 4453931 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.81 | 64.0 | 6.76e-01 | 91.2% | 95.0% |
| 4945673 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 70.0 | 7.19e-01 | 95.6% | 98.4% |
| 4968971 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 59.0 | 6.51e-01 | 91.2% | 98.2% |
| 3711866 | 2.1.1.106 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB | 0.79 | 66.0 | 5.70e-01 | 91.2% | 60.0% |
| 5017215 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 60.0 | 6.53e-01 | 91.2% | 100.0% |
| 4236717 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.78 | 67.0 | 5.41e-01 | 91.2% | 100.0% |
| 4331761 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.78 | 63.0 | 5.24e-01 | 86.8% | 78.3% |
| 5023741 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 55.0 | 6.25e-01 | 86.8% | 100.0% |
| 3511510 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.78 | 63.0 | 5.15e-01 | 94.1% | 49.2% |
| 3164388 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.78 | 59.0 | 6.02e-01 | 85.3% | 83.1% |
| 3969377 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 68.0 | 6.67e-01 | 98.5% | 97.3% |
| 4984320 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.76 | 63.0 | 5.05e-01 | 89.7% | 82.3% |
| 1000222 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.76 | 64.0 | 5.75e-01 | 91.2% | 82.6% |
| 3594041 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 64.0 | 6.54e-01 | 91.2% | 95.4% |
| 4646663 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.76 | 61.0 | 4.82e-01 | 86.8% | 77.0% |
| 4180660 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.76 | 61.0 | 5.11e-01 | 86.8% | 71.7% |
| 4281449 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.76 | 61.0 | 4.90e-01 | 86.8% | 69.5% |
| 4237578 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.76 | 64.0 | 5.20e-01 | 91.2% | 99.2% |
| 4600473 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.75 | 60.0 | 4.79e-01 | 86.8% | 83.7% |
| 3517758 | 2.1.1.106 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB | 0.75 | 67.0 | 6.35e-01 | 98.5% | 82.5% |
| 3967128 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.75 | 58.0 | 5.80e-01 | 82.4% | 80.0% |
| 4261411 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 66.0 | 5.72e-01 | 95.6% | 64.0% |
| 3606816 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 65.0 | 5.50e-01 | 94.1% | 69.1% |
| 4977723 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.75 | 62.0 | 4.86e-01 | 88.2% | 75.6% |
| 3830803 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 64.0 | 5.53e-01 | 94.1% | 89.5% |
| 4167472 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.75 | 65.0 | 4.16e-01 | 95.6% | 23.2% |
| 1549576 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.75 | 65.0 | 5.07e-01 | 94.1% | 57.7% |
| 4012257 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 65.0 | 5.45e-01 | 95.6% | 71.1% |
| 4451633 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.74 | 64.0 | 5.11e-01 | 94.1% | 98.5% |
| 5071787 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.74 | 61.0 | 4.91e-01 | 89.7% | 79.2% |
| 3988584 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.74 | 59.0 | 5.21e-01 | 86.8% | 81.0% |
| 5042671 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.74 | 64.0 | 5.19e-01 | 94.1% | 100.0% |
| 4311691 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.74 | 62.0 | 4.88e-01 | 91.2% | 90.4% |
| 4380962 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.74 | 60.0 | 5.17e-01 | 88.2% | 77.1% |
| 4338421 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.74 | 61.0 | 6.29e-01 | 91.2% | 100.0% |
| 4250478 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.73 | 59.0 | 4.78e-01 | 88.2% | 86.2% |
| 5065013 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.73 | 61.0 | 4.55e-01 | 89.7% | 81.2% |
| 4502644 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.73 | 60.0 | 4.90e-01 | 88.2% | 69.2% |
| 4497266 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.73 | 59.0 | 4.90e-01 | 86.8% | 75.4% |
| 3970344 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.73 | 61.0 | 5.00e-01 | 91.2% | 100.0% |
| 4083610 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.72 | 61.0 | 6.23e-01 | 92.6% | 100.0% |
| 5020056 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.72 | 60.0 | 4.95e-01 | 89.7% | 87.3% |
| 3226147 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.72 | 64.0 | 5.98e-01 | 98.5% | 91.8% |
| 3164941 | 129.1.1.99 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF4131 | 0.72 | 62.0 | 5.47e-01 | 95.6% | 93.0% |
| 4103327 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.72 | 62.0 | 5.07e-01 | 94.1% | 100.0% |
| 4955709 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.72 | 60.0 | 4.91e-01 | 89.7% | 85.8% |
| 2502534 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.72 | 58.0 | 5.35e-01 | 86.8% | 71.3% |
| 4461636 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.72 | 62.0 | 6.20e-01 | 94.1% | 98.6% |
| 4156536 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.72 | 58.0 | 4.89e-01 | 86.8% | 85.5% |
| 4250218 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.72 | 60.0 | 6.23e-01 | 91.2% | 100.0% |
| 4047622 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.72 | 59.0 | 4.96e-01 | 88.2% | 84.5% |
| 3251601 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 63.0 | 6.14e-01 | 100.0% | 94.7% |
| 4235194 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.71 | 58.0 | 4.70e-01 | 88.2% | 70.4% |
| 5077487 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.71 | 59.0 | 4.66e-01 | 91.2% | 80.0% |
| 4492826 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.71 | 57.0 | 4.74e-01 | 86.8% | 82.6% |
| 3945552 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.71 | 58.0 | 4.80e-01 | 88.2% | 73.9% |
| 4582532 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 61.0 | 5.75e-01 | 94.1% | 87.5% |
| 5058672 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 54.0 | 5.72e-01 | 88.2% | 96.6% |
| 4990915 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 58.0 | 5.79e-01 | 91.2% | 94.3% |
| 4998346 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.70 | 60.0 | 4.79e-01 | 94.1% | 92.3% |
| 4391061 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.70 | 57.0 | 4.72e-01 | 89.7% | 85.0% |
| 3944153 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.70 | 57.0 | 4.86e-01 | 89.7% | 77.3% |
| 4594372 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 58.0 | 5.25e-01 | 91.2% | 74.4% |
| 3424196 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.69 | 60.0 | 5.58e-01 | 95.6% | 89.4% |
| 4982943 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 61.0 | 4.85e-01 | 100.0% | 77.9% |
| 3689299 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 57.0 | 4.96e-01 | 97.1% | 80.0% |
| 3403112 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 56.0 | 5.10e-01 | 94.1% | 73.7% |
| 143318 | 2.1.1.114 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › AceES-2 | 0.67 | 56.0 | 4.88e-01 | 94.1% | 68.9% |
| 3947044 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 52.0 | 5.10e-01 | 91.2% | 90.7% |
| 4149372 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 46.0 | 4.70e-01 | 89.7% | 80.0% |
| 4940372 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.62 | 47.0 | 4.68e-01 | 92.6% | 80.0% |
| 4928706 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.62 | 47.0 | 4.75e-01 | 94.1% | 81.4% |
| 4053455 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.61 | 45.0 | 4.52e-01 | 92.6% | 77.1% |
| 3384073 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 46.0 | 3.94e-01 | 85.3% | 100.0% |
| 998700 | 2.18.1.1 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › NigD_N | 0.60 | 49.0 | 4.82e-01 | 94.1% | 93.3% |
| 3684504 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.53 | 45.0 | 3.99e-01 | 98.5% | 69.5% |
D2
high
residues 105-190_261-272
Domain cluster:
rep: MZ333134.1__QXG07748.1__X__00016__D390-489
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.76 | 65.0 | 6.36e-01 | 100.0% | 85.6% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.70 | 60.0 | 5.88e-01 | 100.0% | 85.0% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 45.0 | 4.38e-01 | 100.0% | 77.5% |
| 3j26N01 | 2.60.120.1100 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 45.0 | 3.83e-01 | 87.8% | 95.9% |
| 1yelA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.57 | 44.0 | 4.44e-01 | 85.7% | 88.2% |
| 3mi6B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 43.0 | 4.30e-01 | 100.0% | 83.7% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 36.0 | 3.14e-01 | 70.4% | 94.9% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.52 | 42.0 | 3.71e-01 | 88.8% | 76.2% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.51 | 41.0 | 3.67e-01 | 89.8% | 75.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1156585 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.71 | 60.0 | 5.78e-01 | 100.0% | 80.5% |
| 4945363 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.65 | 53.0 | 5.41e-01 | 100.0% | 93.7% |
| 3783233 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.63 | 55.0 | 4.47e-01 | 100.0% | 49.2% |
| 4991105 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.61 | 53.0 | 4.39e-01 | 100.0% | 71.6% |
| 3367405 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.61 | 40.0 | 3.86e-01 | 96.9% | 59.1% |
| 5047325 | 12.1.1.35 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C | 0.58 | 45.0 | 4.60e-01 | 100.0% | 87.4% |
| 4490072 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.58 | 49.0 | 4.77e-01 | 100.0% | 84.5% |
| 5072187 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.58 | 46.0 | 3.08e-01 | 88.8% | 55.3% |
| 5065537 | 12.1.1.35 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C | 0.58 | 45.0 | 4.65e-01 | 100.0% | 92.2% |
| 3511991 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.57 | 39.0 | 3.81e-01 | 100.0% | 63.6% |
| 4960415 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 4.10e-01 | 100.0% | 82.4% |
| 4993821 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 3.86e-01 | 100.0% | 69.9% |
| 4062537 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.54 | 35.0 | 3.02e-01 | 92.9% | 40.6% |
| 4932771 | 11.1.1.1128 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27408 | 0.53 | 46.0 | 4.07e-01 | 100.0% | 74.0% |
| 3255935 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 35.0 | 3.53e-01 | 100.0% | 67.0% |
| 3615124 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.52 | 41.0 | 2.76e-01 | 84.7% | 25.6% |