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OQ938578.1__WIC89112.1__SEA_KHARCHO_66__00066

Bact-Vir

OQ938578.1__WIC89112.1__SEA_KHARCHO_66__00066

Identity

Accession:
OQ938578 ↗
Kingdom:
phage

Quality

84.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Arthrobacter_phage_Kharcho

TaxID: 2927277

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-231
PDB
Domain cluster: rep: Glutamine-fructose-6-phosphate_amidotransferase__NP_048448__Paramecium_bursaria_Chlorella_virus_1__10506__D3-231
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13522.12 best GATase_6 53.7 3.00e-14 57.6% 93.1%
PF13537.12 GATase_7 32.8 8.60e-08 52.4% 87.0%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ct9A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.89 72.0 7.86e-01 100.0% 97.9%
1xffA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.88 83.0 8.16e-01 100.0% 93.3%
6czfA01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.85 83.0 7.21e-01 100.0% 75.4%
1ao0A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.84 79.0 7.08e-01 100.0% 74.0%
1ea0A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.83 80.0 6.35e-01 100.0% 96.2%
4zfjD00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.81 77.0 7.75e-01 100.0% 98.7%
7ylzA01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.78 72.0 7.43e-01 100.0% 100.0%
1te5A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.76 73.0 7.05e-01 99.1% 99.6%
1jgtB01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.76 62.0 6.59e-01 100.0% 94.6%
1q15A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.68 57.0 5.98e-01 100.0% 97.1%
2iruA02 3.30.70.3300 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 28.0 3.61e-01 95.2% 75.4%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.58 29.0 3.63e-01 95.6% 78.2%
1dgsA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.57 25.0 3.85e-01 95.2% 100.0%
1ollA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 22.0 3.26e-01 86.0% 90.5%
2vsdA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 23.0 3.24e-01 96.9% 95.7%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5024221 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.90 72.0 7.92e-01 100.0% 98.4%
4990809 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.89 61.0 7.39e-01 99.1% 99.4%
5010284 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.89 79.0 8.17e-01 100.0% 96.3%
4991572 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.89 86.0 8.51e-01 100.0% 99.2%
5010282 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.89 71.0 7.81e-01 100.0% 98.4%
5074315 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.88 85.0 6.87e-01 100.0% 98.3%
4321843 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.88 82.0 8.29e-01 95.6% 99.1%
3596220 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.88 85.0 7.67e-01 100.0% 94.6%
5009366 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.88 85.0 8.01e-01 100.0% 97.0%
None — 0.88 83.0 8.20e-01 100.0% 94.5%
None — 0.87 83.0 8.18e-01 100.0% 93.3%
3196133 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 85.0 7.38e-01 100.0% 94.7%
3993653 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 85.0 7.57e-01 100.0% 94.7%
4259223 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 83.0 8.20e-01 100.0% 94.9%
3963821 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 83.0 8.05e-01 100.0% 90.0%
4000151 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.87 72.0 7.73e-01 100.0% 96.5%
3712071 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 85.0 7.62e-01 100.0% 88.1%
None — 0.87 85.0 7.61e-01 100.0% 92.5%
3356117 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 84.0 7.45e-01 100.0% 90.3%
4680317 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.87 82.0 8.18e-01 100.0% 94.9%
4422215 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 81.0 8.18e-01 96.5% 99.1%
4947903 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 83.0 8.08e-01 100.0% 91.8%
4149445 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.87 82.0 8.01e-01 100.0% 91.0%
5027017 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 76.0 7.92e-01 91.3% 97.1%
4991740 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.87 84.0 7.97e-01 100.0% 98.5%
None — 0.87 84.0 7.96e-01 100.0% 98.1%
4951704 210.1.3.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_2 0.86 80.0 8.06e-01 95.6% 100.0%
3532427 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.86 83.0 7.94e-01 100.0% 98.5%
4994995 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.86 84.0 8.34e-01 100.0% 98.3%
5066749 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.86 84.0 8.17e-01 100.0% 96.7%
3741900 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.86 84.0 7.94e-01 100.0% 98.1%
4940798 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.86 82.0 8.02e-01 100.0% 91.8%
4588679 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.86 84.0 8.16e-01 100.0% 95.1%
5052100 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.86 83.0 8.07e-01 100.0% 96.0%
4928832 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.86 80.0 8.13e-01 100.0% 97.3%
4999227 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.86 83.0 8.00e-01 100.0% 94.9%
4976025 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.86 82.0 8.02e-01 100.0% 92.2%
3774325 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.86 73.0 7.53e-01 100.0% 91.4%
3963395 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.86 83.0 7.97e-01 100.0% 96.9%
4947599 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.86 83.0 8.09e-01 100.0% 95.1%
4986617 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.85 77.0 7.87e-01 100.0% 96.4%
3973007 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.85 83.0 8.00e-01 100.0% 96.0%
4994017 210.1.3.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_2 0.85 82.0 7.27e-01 100.0% 98.7%
5081628 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.85 83.0 7.99e-01 100.0% 92.4%
5027645 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.85 82.0 7.82e-01 100.0% 96.2%
3280543 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.85 82.0 8.04e-01 100.0% 97.6%
5071630 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.85 82.0 8.08e-01 100.0% 96.2%
None — 0.85 82.0 8.09e-01 100.0% 95.8%
4976794 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.85 80.0 8.04e-01 100.0% 97.0%
None — 0.85 82.0 8.02e-01 100.0% 96.7%
None — 0.85 81.0 8.09e-01 100.0% 96.6%
4952406 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.85 72.0 7.63e-01 100.0% 97.1%
None — 0.85 82.0 8.08e-01 100.0% 96.7%
4147605 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.85 82.0 7.94e-01 100.0% 92.8%
4484517 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.85 81.0 7.85e-01 100.0% 90.8%
4954583 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.85 82.0 8.07e-01 100.0% 96.7%
5013417 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.85 81.0 8.07e-01 100.0% 96.2%
4981026 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.84 81.0 7.98e-01 100.0% 94.6%
4971386 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.84 81.0 7.29e-01 100.0% 98.7%
4945633 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.84 80.0 7.98e-01 100.0% 97.0%
4541620 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.84 81.0 7.78e-01 100.0% 91.4%
5032499 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.84 81.0 7.90e-01 100.0% 97.1%
5001463 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.83 80.0 7.25e-01 100.0% 99.3%
4100017 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.83 80.0 7.47e-01 100.0% 98.5%
3685838 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.83 80.0 6.89e-01 100.0% 91.5%
5073588 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.83 80.0 7.61e-01 100.0% 99.2%
5038401 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.83 80.0 7.29e-01 100.0% 98.6%
5049285 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.82 77.0 7.77e-01 100.0% 96.5%
4012892 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.82 79.0 6.78e-01 100.0% 92.1%
3782814 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.82 79.0 7.16e-01 100.0% 98.6%
5041223 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.82 79.0 7.05e-01 100.0% 98.7%
3965213 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.82 80.0 7.39e-01 100.0% 92.7%
5054721 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.82 80.0 7.83e-01 100.0% 97.5%
3273426 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.82 79.0 7.43e-01 100.0% 98.9%
3942872 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.82 78.0 7.50e-01 98.7% 99.2%
4960069 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.82 79.0 7.94e-01 100.0% 99.1%
4928834 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.82 74.0 7.62e-01 100.0% 98.2%
5027271 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.82 77.0 7.50e-01 98.7% 100.0%
3961853 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.81 77.0 7.75e-01 100.0% 98.7%
3283168 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.80 77.0 7.25e-01 100.0% 98.1%
5075402 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.80 76.0 7.02e-01 100.0% 97.5%
4944470 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.79 76.0 7.44e-01 99.6% 99.2%
5055717 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.79 73.0 7.31e-01 100.0% 93.2%
3951046 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.79 76.0 7.17e-01 99.6% 92.1%
3287103 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.78 72.0 7.21e-01 99.6% 93.9%
4974457 210.1.3.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.78 71.0 7.28e-01 100.0% 98.2%
4646896 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.77 73.0 6.92e-01 100.0% 84.5%
4224238 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.77 73.0 7.35e-01 100.0% 97.4%
3604150 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.76 73.0 6.98e-01 100.0% 90.4%
3263898 210.1.3.4 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.75 73.0 7.15e-01 100.0% 93.9%