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OQ938579.1__WIC89183.1__SEA_BOGOTA_33__00033

Bact-Vir

OQ938579.1__WIC89183.1__SEA_BOGOTA_33__00033

Identity

Accession:
OQ938579 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_Bogota

TaxID: 3049365

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-154
PDB
Domain cluster: rep: BML_08182015_1_5m_scaffold_9_prodigal-single.1__X__X__00022__D715-825
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18896.6 best SLT_3 44.2 2.90e-11 65.1% 96.5%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1iizA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.79 61.0 6.70e-01 90.4% 96.7%
1hfxA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.73 57.0 6.20e-01 91.1% 96.7%
4yf2A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.72 59.0 6.29e-01 91.1% 96.2%
6ukcA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.70 58.0 6.05e-01 89.7% 95.5%
2dqaA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.65 51.0 5.56e-01 82.2% 99.2%
1dj8A00 1.10.890.10 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A 0.65 27.0 3.60e-01 96.6% 70.9%
4yibA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.64 54.0 5.26e-01 89.0% 92.4%
1am7A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.62 49.0 4.87e-01 82.9% 98.1%
3w6bB00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.61 50.0 4.97e-01 87.0% 92.2%
1svmA01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.60 34.0 4.16e-01 95.9% 88.9%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.53 29.0 3.50e-01 82.2% 80.0%
6v3zA00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.53 39.0 3.68e-01 84.2% 62.9%
7lb8B02 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.52 43.0 3.48e-01 92.5% 82.3%
3ibhA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 25.0 2.80e-01 100.0% 56.8%
2mpcA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.51 31.0 3.68e-01 73.3% 95.6%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.50 37.0 3.80e-01 77.4% 93.0%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4218605 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.79 58.0 6.53e-01 83.6% 95.7%
3396023 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.77 60.0 6.66e-01 91.1% 98.3%
3527879 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.76 61.0 6.44e-01 91.8% 93.8%
3398878 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.75 58.0 6.40e-01 89.7% 97.5%
3397092 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.74 61.0 6.43e-01 91.8% 94.7%
4010532 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.70 55.0 5.86e-01 81.5% 98.5%
3960956 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.70 50.0 5.49e-01 73.3% 98.3%
82935 235.1.1.1 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.70 61.0 6.28e-01 91.1% 97.1%
3947473 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.69 58.0 5.78e-01 88.4% 89.3%
3317412 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.68 59.0 5.29e-01 91.8% 74.5%
4431057 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.68 59.0 6.00e-01 91.8% 98.6%
2647598 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.68 57.0 5.30e-01 89.0% 94.5%
3985073 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.68 59.0 6.13e-01 92.5% 99.3%
3945340 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.68 53.0 5.32e-01 81.5% 100.0%
4205221 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.67 58.0 5.59e-01 89.7% 100.0%
3838879 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.67 57.0 5.74e-01 89.7% 92.6%
3222819 235.1.1.12 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase 0.66 49.0 5.17e-01 76.0% 96.9%
3245104 235.1.1.12 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase 0.60 48.0 5.22e-01 86.3% 99.2%
4989791 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.54 46.0 3.65e-01 91.8% 91.5%
4034551 5065.1.1.2 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD 0.52 44.0 3.52e-01 94.5% 89.2%