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OQ938585.1__WIC89703.1__SEA_BRAXOADDIE_81__00081

Bact-Vir

OQ938585.1__WIC89703.1__SEA_BRAXOADDIE_81__00081

Identity

Accession:
OQ938585 ↗
Kingdom:
phage

Quality

51.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 163-244
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.73 54.0 4.85e-01 78.0% 81.6%
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.71 60.0 5.52e-01 93.9% 82.4%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 50.0 4.47e-01 79.3% 99.2%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 53.0 4.26e-01 85.4% 98.1%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.66 54.0 5.28e-01 89.0% 83.1%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 48.0 5.31e-01 76.8% 100.0%
4huzA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.65 46.0 3.62e-01 73.2% 64.5%
1o7dD01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.65 50.0 3.49e-01 82.9% 90.8%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 47.0 5.12e-01 78.0% 98.5%
8aidA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 46.0 3.95e-01 76.8% 79.1%
4ok4A02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.63 49.0 3.24e-01 85.4% 78.7%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.62 46.0 3.55e-01 78.0% 82.8%
4gyiA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 44.0 4.12e-01 73.2% 93.9%
2yrrA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 56.0 5.03e-01 100.0% 87.4%
6zxfz01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.61 47.0 4.17e-01 84.1% 90.2%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.61 52.0 4.31e-01 95.1% 54.8%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 50.0 4.03e-01 92.7% 69.8%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 49.0 4.23e-01 91.5% 78.0%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 50.0 4.19e-01 92.7% 83.3%
5ih0A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 45.0 4.34e-01 80.5% 92.5%
6qpwA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 52.0 4.20e-01 96.3% 68.0%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 43.0 2.94e-01 79.3% 30.1%
3rheA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 41.0 3.72e-01 73.2% 79.8%
4ew6A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 50.0 3.93e-01 100.0% 44.4%
4glaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 39.0 3.85e-01 70.7% 83.1%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.57 40.0 4.30e-01 74.4% 100.0%
1a87A01 3.30.1120.60 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin 0.57 44.0 4.16e-01 82.9% 82.5%
8ainB01 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.55 41.0 3.88e-01 82.9% 93.3%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 38.0 3.23e-01 73.2% 76.6%
4pavB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 46.0 3.91e-01 92.7% 86.3%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 36.0 3.27e-01 70.7% 62.1%
3bgtA01 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.53 43.0 3.22e-01 92.7% 82.3%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 43.0 3.84e-01 96.3% 100.0%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.52 42.0 3.08e-01 90.2% 63.5%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 39.0 3.44e-01 80.5% 67.5%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.52 42.0 3.35e-01 90.2% 80.9%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.50 38.0 4.09e-01 80.5% 93.0%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4018889 2004.1.1.481 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 0.73 51.0 3.17e-01 73.2% 27.2%
3949346 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.71 47.0 4.02e-01 78.0% 43.0%
4991490 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.69 50.0 5.54e-01 79.3% 96.9%
3184801 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.69 57.0 3.64e-01 89.0% 28.1%
3481490 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.68 57.0 5.07e-01 92.7% 85.0%
3934170 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.68 57.0 5.46e-01 92.7% 97.9%
3208232 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.68 56.0 3.46e-01 89.0% 24.4%
3388541 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.68 59.0 5.67e-01 97.6% 96.8%
3403936 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.68 58.0 5.37e-01 96.3% 100.0%
3799398 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.68 59.0 4.73e-01 98.8% 58.2%
3220436 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.67 58.0 4.71e-01 98.8% 77.7%
4935086 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.67 54.0 4.37e-01 86.6% 84.5%
3201636 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.67 55.0 3.52e-01 89.0% 28.7%
4978331 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.66 48.0 5.10e-01 87.8% 90.0%
4964966 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.66 53.0 4.26e-01 86.6% 87.7%
3187947 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.65 52.0 3.34e-01 89.0% 28.0%
4386896 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.63 47.0 3.17e-01 78.0% 36.0%
3956067 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.63 44.0 3.95e-01 75.6% 50.8%
5023556 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.62 48.0 3.39e-01 85.4% 42.2%
3782254 12.3.1.9 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_81 0.62 49.0 3.29e-01 86.6% 60.6%
5035308 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.61 48.0 3.61e-01 85.4% 51.2%
4583633 206.1.1.35 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH_6_hur 0.61 50.0 3.50e-01 92.7% 32.9%
4986443 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.61 48.0 3.40e-01 86.6% 42.6%
5000331 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.61 42.0 3.14e-01 70.7% 45.9%
None 0.61 49.0 3.64e-01 90.2% 49.8%
4497740 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.61 38.0 4.43e-01 85.4% 88.3%
3591361 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.60 48.0 3.34e-01 89.0% 38.6%
3242469 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 50.0 3.12e-01 92.7% 41.6%
5017633 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.60 45.0 3.32e-01 80.5% 45.5%
4937428 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.60 48.0 4.00e-01 86.6% 84.8%
4024858 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.60 47.0 3.21e-01 86.6% 34.9%
3662506 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.60 48.0 3.48e-01 90.2% 36.0%
4967263 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.59 39.0 3.58e-01 74.4% 50.9%
5049007 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.59 47.0 3.54e-01 89.0% 51.2%
4991847 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.59 48.0 3.40e-01 91.5% 44.1%
3193556 2004.1.1.481 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 0.59 51.0 2.95e-01 96.3% 14.7%
3900182 206.1.1.51 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PIP49_C 0.59 42.0 2.81e-01 75.6% 27.1%
3737237 2004.1.1.615 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23, AAA_29 0.59 51.0 3.15e-01 96.3% 25.6%
4963567 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.58 44.0 2.90e-01 81.7% 28.9%
3734392 2004.1.1.480 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 0.58 51.0 3.13e-01 96.3% 22.6%
3505929 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.58 45.0 3.56e-01 85.4% 61.1%
3928054 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 42.0 2.98e-01 78.0% 38.1%
4943980 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.57 46.0 3.47e-01 91.5% 52.0%
3969569 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.57 35.0 4.06e-01 80.5% 85.0%
2589440 4036.1.1.1 a+b two layers › Insertion domain in adenylylcyclase toxin (the edema factor) › Insertion domain in adenylylcyclase toxin (the edema factor) › Insertion domain in adenylylcyclase toxin (the edema factor) › Anthrax_toxA 0.57 40.0 3.53e-01 82.9% 48.0%
3967545 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.56 39.0 3.13e-01 72.0% 87.5%
4556832 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.56 49.0 3.27e-01 97.6% 40.0%
4305615 2004.1.1.414 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 0.55 48.0 3.17e-01 98.8% 74.9%
3985171 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.55 39.0 3.29e-01 74.4% 94.3%
3967128 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 40.0 4.27e-01 75.6% 90.0%
3406342 7525.1.1.2 a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 0.55 46.0 2.94e-01 92.7% 91.5%
4373021 2.4.1.6 beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.54 38.0 3.61e-01 80.5% 61.6%
3512112 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 40.0 2.63e-01 81.7% 30.0%
4391061 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 39.0 3.48e-01 78.0% 54.2%
4451633 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.53 39.0 3.36e-01 78.0% 51.5%
5051694 218.4.1.1 a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.53 42.0 3.80e-01 84.1% 94.5%
3943796 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 39.0 4.03e-01 78.0% 86.3%
4165211 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.53 39.0 3.23e-01 78.0% 47.6%
3818723 5.1.8.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › FBA_3 0.53 38.0 3.04e-01 76.8% 39.4%
5065013 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.52 38.0 3.06e-01 78.0% 44.4%
4235194 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.51 37.0 3.24e-01 75.6% 52.0%
D2 medium residues 337-466
PDB