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OQ938592.1__WIC90179.1__SEA_VROOMVROOM_29__00029
Bact-VirOQ938592.1__WIC90179.1__SEA_VROOMVROOM_29__00029
Identity
- Accession:
- OQ938592 ↗
- Kingdom:
- phage
Quality
69.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casidaviridae›
Hilgardvirus›
Arthrobacter_phage_VroomVroom
TaxID: 3049371
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 49-101
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hdwA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.68 | 57.0 | 3.65e-01 | 90.6% | 40.4% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 47.0 | 4.66e-01 | 79.2% | 68.4% |
| 1bywA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.66 | 56.0 | 4.51e-01 | 100.0% | 60.9% |
| 2ewvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.66 | 51.0 | 4.17e-01 | 86.8% | 46.1% |
| 4nehA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.64 | 53.0 | 3.23e-01 | 100.0% | 20.5% |
| 4nvrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 52.0 | 3.22e-01 | 90.6% | 25.2% |
| 3jvvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.63 | 49.0 | 4.04e-01 | 86.8% | 46.0% |
| 1avgI00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 47.0 | 3.52e-01 | 84.9% | 54.2% |
| 4i93A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 50.0 | 4.13e-01 | 88.7% | 87.4% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.62 | 47.0 | 4.21e-01 | 96.2% | 57.1% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 47.0 | 3.93e-01 | 84.9% | 97.9% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 43.0 | 4.24e-01 | 79.2% | 70.2% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.60 | 46.0 | 3.89e-01 | 90.6% | 74.5% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 52.0 | 4.28e-01 | 100.0% | 100.0% |
| 1nycA00 | 2.40.310.10 | Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors | 0.59 | 46.0 | 3.73e-01 | 88.7% | 79.3% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 44.0 | 3.15e-01 | 81.1% | 39.8% |
| 2g1lA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.59 | 50.0 | 4.14e-01 | 100.0% | 84.5% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.59 | 48.0 | 3.63e-01 | 94.3% | 99.3% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.59 | 44.0 | 3.63e-01 | 83.0% | 45.1% |
| 4gyiA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 46.0 | 3.83e-01 | 86.8% | 95.9% |
| 4lduA02 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.58 | 50.0 | 3.97e-01 | 94.3% | 74.5% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 45.0 | 2.95e-01 | 90.6% | 19.4% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 46.0 | 3.44e-01 | 94.3% | 66.2% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.58 | 45.0 | 3.62e-01 | 100.0% | 42.6% |
| 1ci0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 48.0 | 3.33e-01 | 100.0% | 75.5% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.57 | 47.0 | 3.53e-01 | 100.0% | 40.9% |
| 2m7oA00 | 3.10.450.400 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 | 0.57 | 41.0 | 3.88e-01 | 90.6% | 61.4% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 44.0 | 3.64e-01 | 94.3% | 44.4% |
| 2l3tA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 42.0 | 3.60e-01 | 88.7% | 61.0% |
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.55 | 40.0 | 3.54e-01 | 83.0% | 94.3% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 3.63e-01 | 75.5% | 59.4% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 43.0 | 3.74e-01 | 90.6% | 54.4% |
| 5xd6B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 43.0 | 3.65e-01 | 88.7% | 84.0% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 41.0 | 2.74e-01 | 86.8% | 69.4% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 43.0 | 3.65e-01 | 94.3% | 55.3% |
| 2o18A00 | 3.10.520.10 | Alpha Beta › Roll › T-fold › ApbE-like domains | 0.53 | 41.0 | 2.71e-01 | 98.1% | 97.1% |
| 3k1dA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 39.0 | 3.37e-01 | 90.6% | 100.0% |
| 1t9mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 40.0 | 2.85e-01 | 96.2% | 72.1% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.51 | 40.0 | 3.40e-01 | 92.5% | 70.1% |
| 1x99A00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.51 | 40.0 | 3.16e-01 | 100.0% | 71.0% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.50 | 38.0 | 3.50e-01 | 92.5% | 73.4% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3807111 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.83 | 57.0 | 3.50e-01 | 71.7% | 25.1% |
| 4941547 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.75 | 54.0 | 4.39e-01 | 77.4% | 85.0% |
| 3961452 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.72 | 56.0 | 4.46e-01 | 84.9% | 43.8% |
| 4028777 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.72 | 59.0 | 3.29e-01 | 90.6% | 14.3% |
| 3928054 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 55.0 | 3.47e-01 | 88.7% | 17.0% |
| 4998603 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.69 | 53.0 | 4.73e-01 | 84.9% | 58.7% |
| 4231610 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.69 | 54.0 | 3.88e-01 | 84.9% | 55.5% |
| 4992199 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.68 | 50.0 | 4.21e-01 | 84.9% | 46.7% |
| 5056920 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.68 | 52.0 | 3.22e-01 | 81.1% | 27.2% |
| 5047354 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.67 | 52.0 | 4.06e-01 | 86.8% | 43.3% |
| 5056110 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.66 | 52.0 | 3.96e-01 | 90.6% | 77.0% |
| 3181119 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.64 | 51.0 | 2.99e-01 | 86.8% | 17.2% |
| 5071831 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.64 | 50.0 | 4.20e-01 | 84.9% | 50.0% |
| 3701911 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.64 | 51.0 | 3.47e-01 | 92.5% | 27.3% |
| 5018492 | 223.1.1.24 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 | 0.63 | 55.0 | 4.23e-01 | 100.0% | 48.0% |
| 3892575 | 827.1.1.1 ↗ | a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain › Integrin_B_tail | 0.63 | 50.0 | 4.36e-01 | 86.8% | 98.8% |
| 4949933 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.62 | 55.0 | 3.48e-01 | 100.0% | 21.5% |
| 4975949 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.62 | 50.0 | 3.27e-01 | 92.5% | 75.3% |
| 3575356 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 52.0 | 3.27e-01 | 100.0% | 40.6% |
| 4957167 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.61 | 54.0 | 3.48e-01 | 100.0% | 24.1% |
| 3715939 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.61 | 48.0 | 3.30e-01 | 88.7% | 23.4% |
| 3591940 | 223.2.1.19 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 | 0.61 | 50.0 | 3.46e-01 | 94.3% | 44.7% |
| 3933904 | 5.1.4.333 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF31099 | 0.60 | 50.0 | 3.01e-01 | 100.0% | 21.3% |
| 5065641 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 43.0 | 3.22e-01 | 83.0% | 28.0% |
| 3697960 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.59 | 48.0 | 3.62e-01 | 98.1% | 49.3% |
| 3830390 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.59 | 48.0 | 2.99e-01 | 92.5% | 61.3% |
| 3286732 | 243.1.1.72 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3071 | 0.58 | 46.0 | 3.77e-01 | 86.8% | 80.0% |
| 3604446 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.58 | 48.0 | 2.73e-01 | 96.2% | 9.7% |
| 4026643 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 39.0 | 3.47e-01 | 71.7% | 44.7% |
| 3739225 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.57 | 45.0 | 2.80e-01 | 92.5% | 13.1% |
| 3851797 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.57 | 42.0 | 3.07e-01 | 83.0% | 32.7% |
| 3213553 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.56 | 44.0 | 2.88e-01 | 90.6% | 25.3% |
| 3415592 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.56 | 45.0 | 3.43e-01 | 98.1% | 68.0% |
| 3662843 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.56 | 39.0 | 2.45e-01 | 77.4% | 21.4% |
| 3624850 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.55 | 42.0 | 3.51e-01 | 88.7% | 82.9% |
| 4974435 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.55 | 42.0 | 3.63e-01 | 90.6% | 60.0% |
| 5004807 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.55 | 46.0 | 2.81e-01 | 100.0% | 14.2% |
| 4878467 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.55 | 41.0 | 3.51e-01 | 86.8% | 61.5% |
| 3542090 | 331.9.1.7 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP5B1_C | 0.54 | 43.0 | 3.55e-01 | 94.3% | 86.4% |
| 5022726 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 36.0 | 3.74e-01 | 71.7% | 74.0% |
| 4859328 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.54 | 41.0 | 3.14e-01 | 86.8% | 42.1% |
| 3962202 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.54 | 42.0 | 3.44e-01 | 94.3% | 96.5% |
| 4176400 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.53 | 41.0 | 3.71e-01 | 84.9% | 60.0% |
| 4951266 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.53 | 42.0 | 2.54e-01 | 88.7% | 18.5% |
| 3292852 | 4086.1.1.1 ↗ | a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI | 0.53 | 38.0 | 3.28e-01 | 81.1% | 68.4% |
| 3823102 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.52 | 42.0 | 3.20e-01 | 92.5% | 52.9% |
| 3175033 | 4086.1.1.1 ↗ | a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI | 0.52 | 38.0 | 3.33e-01 | 83.0% | 81.1% |
| 2537367 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.52 | 38.0 | 2.74e-01 | 84.9% | 39.1% |
| 222972 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.51 | 38.0 | 3.44e-01 | 92.5% | 67.4% |
| 4027047 | 241.6.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits | 0.51 | 41.0 | 3.22e-01 | 100.0% | 65.7% |
| 4875038 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.50 | 39.0 | 3.03e-01 | 96.2% | 45.3% |
| 4054729 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.50 | 36.0 | 3.39e-01 | 84.9% | 66.7% |