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OQ955832.1__WKV24535.1__X__00032

Bact-Vir

OQ955832.1__WKV24535.1__X__00032

Identity

Accession:
OQ955832 ↗
Kingdom:
phage

Quality

74.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nonanavirus› Escherichia_phage_vB_EcoS_PJ16

TaxID: 3061300

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-63
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 60.0 5.85e-01 89.5% 88.7%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 56.0 4.96e-01 87.7% 62.4%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 50.0 5.34e-01 75.4% 100.0%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 4.74e-01 89.5% 86.5%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 54.0 5.28e-01 86.0% 84.1%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 56.0 4.91e-01 89.5% 64.7%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.25e-01 84.2% 85.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 54.0 5.58e-01 86.0% 96.2%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 54.0 5.61e-01 87.7% 98.0%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 4.57e-01 86.0% 67.4%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 53.0 5.17e-01 86.0% 95.2%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 51.0 5.10e-01 84.2% 95.0%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.42e-01 98.2% 91.2%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 5.31e-01 89.5% 92.9%
3e19B01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.64 49.0 4.82e-01 86.0% 100.0%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.64 50.0 4.64e-01 89.5% 85.5%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 53.0 4.52e-01 93.0% 85.9%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 46.0 4.88e-01 87.7% 100.0%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.86e-01 86.0% 92.7%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 53.0 5.23e-01 100.0% 100.0%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 49.0 3.94e-01 91.2% 78.2%
2djhA00 3.30.2310.30 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › Colicin E5 C-terminal ribonuclease domain (CRD) 0.61 51.0 4.36e-01 96.5% 100.0%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 47.0 4.21e-01 91.2% 80.7%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.59 42.0 3.51e-01 75.4% 88.0%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 44.0 3.31e-01 87.7% 59.8%
5hkeA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.57 46.0 3.01e-01 98.2% 95.4%
5ejrA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 4.01e-01 89.5% 87.5%
3g4eA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 43.0 2.81e-01 87.7% 73.1%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 47.0 2.92e-01 93.0% 32.0%
1yzbA01 3.90.70.40 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 47.0 3.77e-01 100.0% 83.9%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 37.0 3.74e-01 70.2% 75.9%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.70e-01 91.2% 37.5%
1st8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 40.0 2.93e-01 87.7% 84.7%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.52 40.0 3.27e-01 94.7% 67.9%
4eqvA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.51 40.0 2.93e-01 91.2% 97.7%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4938404 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 58.0 5.91e-01 87.7% 81.8%
3819340 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.77 62.0 4.81e-01 87.7% 90.0%
3820066 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 60.0 5.93e-01 84.2% 91.7%
4982334 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 58.0 5.98e-01 87.7% 85.5%
3348456 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.76 61.0 6.00e-01 86.0% 93.3%
5002449 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 58.0 5.91e-01 87.7% 85.5%
3264806 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 56.0 5.96e-01 80.7% 90.0%
4659299 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 59.0 5.85e-01 87.7% 83.3%
2831843 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 60.0 4.87e-01 89.5% 50.0%
4935681 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.86e-01 87.7% 89.1%
3704395 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.49e-01 86.0% 90.6%
3517377 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 57.0 4.97e-01 87.7% 57.6%
3598271 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 57.0 4.05e-01 87.7% 31.8%
3778257 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.71 57.0 4.27e-01 87.7% 37.9%
4966534 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 53.0 5.61e-01 86.0% 92.0%
3258767 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.70 56.0 4.11e-01 87.7% 35.3%
4942172 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 4.78e-01 87.7% 56.7%
4995677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.62e-01 87.7% 94.5%
1032191 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.69 55.0 4.99e-01 87.7% 66.2%
3523979 604.12.1.118 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF4537 0.69 54.0 5.35e-01 86.0% 83.3%
4023868 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.69 55.0 4.06e-01 89.5% 34.8%
4473115 4.1.1.5 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.68 56.0 4.62e-01 89.5% 52.0%
3855972 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.68 54.0 5.23e-01 87.7% 78.5%
4000403 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.68 52.0 5.56e-01 82.5% 94.0%
5029770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 54.0 4.42e-01 87.7% 47.6%
3429682 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 54.0 4.99e-01 89.5% 81.3%
4218142 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.67 54.0 4.45e-01 87.7% 54.0%
3821920 4.1.1.283 ↗ beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2 0.67 50.0 5.15e-01 84.2% 92.7%
3518475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.86e-01 86.0% 70.0%
3593635 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 52.0 4.26e-01 91.2% 80.0%
3507338 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 51.0 5.08e-01 87.7% 85.0%
3535499 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 50.0 4.17e-01 91.2% 78.2%
3252821 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 50.0 4.15e-01 91.2% 70.9%
3709315 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 49.0 3.96e-01 89.5% 71.7%
3772065 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.62 49.0 4.06e-01 93.0% 76.5%
3200493 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.62 50.0 5.14e-01 91.2% 92.7%
3268292 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.61 49.0 4.09e-01 91.2% 74.3%
3743890 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 50.0 3.78e-01 93.0% 66.2%
3277005 220.1.1.49 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.61 51.0 3.92e-01 96.5% 65.7%
3561513 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.60 49.0 3.00e-01 91.2% 32.2%
3509523 220.1.1.167 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29707 0.60 48.0 3.75e-01 93.0% 55.7%
3773287 5.1.3.202 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CNH 0.60 49.0 3.02e-01 91.2% 36.0%
3213121 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.59 46.0 4.32e-01 89.5% 73.3%
4259069 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 3.47e-01 98.2% 36.5%
4034521 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.58 45.0 3.84e-01 89.5% 71.0%
3630251 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.58 46.0 4.20e-01 91.2% 66.3%
3769451 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 49.0 3.12e-01 100.0% 57.8%
4119222 375.1.1.135 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Lar_restr_allev 0.58 40.0 4.31e-01 73.7% 100.0%
3260465 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.56 46.0 3.00e-01 100.0% 41.3%
3929729 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.55 44.0 3.16e-01 94.7% 75.4%
4203984 101.8.1.1 ↗ alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f,Anticodon_2 0.55 43.0 2.55e-01 91.2% 10.0%
5014374 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.55 43.0 2.55e-01 91.2% 10.0%
5038362 375.1.1.83 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB 0.53 40.0 3.95e-01 80.7% 81.7%
5047657 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 36.0 3.69e-01 73.7% 81.8%
D2 high residues 129-216
PDB
Domain cluster: rep: OY757066.1__CAK1257060.1__K70PH128C1_LOCUS49__00049__D138-228
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19905.5 best DUF6378 34.6 2.60e-08 95.5% 96.3%