←Back to structures
OQ970155.1__WKW88887.1__LSL4_gp36__00036
Bact-VirOQ970155.1__WKW88887.1__LSL4_gp36__00036
Identity
- Accession:
- OQ970155 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vandenendeviridae›
Nankokuvirus›
Pseudomonas_phage_LSL4
TaxID: 3061297
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-116
Domain cluster:
rep: OP882271.1__WAX22429.1__X__00084__D6-144
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21822.4 best | Phage_TAC_15 | 80.1 | 3.10e-22 | 94.6% | 92.9% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.56 | 24.0 | 3.09e-01 | 100.0% | 68.9% |
| 2hvrA03 | 1.10.10.1810 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA ligase | 0.54 | 36.0 | 4.09e-01 | 95.5% | 88.5% |
| 3hgtA00 | 3.40.50.12360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 46.0 | 3.47e-01 | 96.4% | 99.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947952 | 3103.1.1.3 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_15 | 0.80 | 65.0 | 6.91e-01 | 99.1% | 94.9% |
| 3946464 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.75 | 61.0 | 6.66e-01 | 98.2% | 100.0% |
| 4537543 | 3103.1.1.4 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_9 | 0.71 | 67.0 | 6.41e-01 | 100.0% | 92.0% |
| 4983350 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.60 | 51.0 | 3.42e-01 | 94.6% | 42.8% |
| 3975686 | 6050.1.1.2 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_2 | 0.55 | 48.0 | 5.00e-01 | 99.1% | 100.0% |
| 4065967 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.55 | 43.0 | 3.43e-01 | 85.7% | 80.0% |
| 5019353 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.53 | 41.0 | 3.30e-01 | 82.1% | 73.2% |