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OQ970155.1__WKW89012.1__LSL4_gp161__00161

Bact-Vir

OQ970155.1__WKW89012.1__LSL4_gp161__00161

Identity

Accession:
OQ970155 ↗
Kingdom:
phage

Quality

88.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Nankokuvirus› Pseudomonas_phage_LSL4

TaxID: 3061297

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-67
PDB
Domain cluster: rep: NC_028887.1__YP_009206384.1__AVV02_gp029__00029__D73-135
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 56.0 5.80e-01 77.8% 75.0%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 55.0 6.08e-01 77.8% 90.0%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 53.0 5.28e-01 77.8% 68.2%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 54.0 5.35e-01 79.4% 69.7%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 55.0 5.69e-01 76.2% 79.7%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 52.0 5.65e-01 76.2% 89.8%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 55.0 5.03e-01 77.8% 67.9%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.75 53.0 5.74e-01 79.4% 88.5%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.89e-01 76.2% 96.1%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 52.0 5.89e-01 73.0% 100.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 47.0 5.38e-01 71.4% 89.1%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.50e-01 77.8% 80.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 53.0 5.32e-01 81.0% 75.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.74 54.0 5.30e-01 77.8% 79.1%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 55.0 5.08e-01 81.0% 75.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 54.0 5.54e-01 77.8% 94.9%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.73 49.0 4.05e-01 77.8% 38.9%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.73 53.0 5.45e-01 77.8% 81.7%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 52.0 5.19e-01 79.4% 73.8%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.72 51.0 5.42e-01 77.8% 88.9%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 51.0 5.27e-01 76.2% 96.7%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 52.0 5.22e-01 77.8% 89.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 53.0 4.96e-01 81.0% 77.2%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 53.0 5.05e-01 81.0% 80.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 49.0 5.14e-01 77.8% 82.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 51.0 5.35e-01 77.8% 89.5%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 51.0 5.42e-01 77.8% 96.2%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 5.08e-01 76.2% 77.8%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.70 50.0 5.43e-01 76.2% 98.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 51.0 5.26e-01 77.8% 100.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 4.72e-01 79.4% 64.4%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.69 49.0 4.88e-01 76.2% 75.8%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 52.0 5.15e-01 82.5% 89.6%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 52.0 4.86e-01 82.5% 84.6%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 47.0 5.04e-01 77.8% 90.4%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.67 48.0 4.24e-01 77.8% 61.1%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 48.0 3.89e-01 77.8% 39.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 5.17e-01 95.2% 84.1%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.66 52.0 4.37e-01 87.3% 80.6%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 4.76e-01 77.8% 81.5%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 5.01e-01 84.1% 86.4%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 47.0 4.18e-01 77.8% 55.4%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 44.0 4.44e-01 71.4% 100.0%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 35.0 3.46e-01 100.0% 48.5%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 5.11e-01 87.3% 87.7%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 47.0 3.72e-01 77.8% 38.2%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 4.02e-01 92.1% 43.3%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.63 44.0 4.63e-01 77.8% 84.2%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.38e-01 90.5% 59.4%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 43.0 3.57e-01 79.4% 43.2%
2bh8B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 44.0 4.65e-01 77.8% 100.0%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 42.0 3.96e-01 76.2% 100.0%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.58 41.0 3.01e-01 77.8% 84.6%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 44.0 3.91e-01 85.7% 63.7%
4b9dB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 42.0 3.70e-01 81.0% 80.6%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.55 38.0 3.53e-01 73.0% 97.6%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 38.0 3.42e-01 79.4% 76.7%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.52 39.0 3.71e-01 85.7% 77.9%
2k3dA00 3.10.450.130 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › folded 79 residue fragment of lin0334 like domains 0.52 43.0 3.97e-01 98.4% 89.7%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.50 38.0 3.05e-01 88.9% 85.1%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943751 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 75.0 7.50e-01 93.7% 90.8%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 62.0 6.18e-01 77.8% 80.0%
1482194 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.82 56.0 5.80e-01 77.8% 75.0%
3907619 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 56.0 5.03e-01 79.4% 54.1%
4024914 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.79 52.0 5.38e-01 74.6% 71.7%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 55.0 5.53e-01 77.8% 70.8%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.79 57.0 5.68e-01 79.4% 73.8%
4564484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 54.0 6.09e-01 73.0% 100.0%
3261395 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 55.0 5.71e-01 81.0% 79.3%
3854862 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 54.0 4.64e-01 79.4% 47.4%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 53.0 4.79e-01 76.2% 52.9%
3508415 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 53.0 4.16e-01 79.4% 35.4%
3562168 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 53.0 4.69e-01 79.4% 51.1%
3934628 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 54.0 4.77e-01 79.4% 52.2%
4015071 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 55.0 5.32e-01 77.8% 68.6%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.76 55.0 5.31e-01 81.0% 68.6%
3535278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 56.0 5.73e-01 85.7% 81.7%
3622846 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.75 53.0 5.81e-01 79.4% 92.0%
3795121 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.75 54.0 5.35e-01 79.4% 72.3%
1140051 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 54.0 6.03e-01 76.2% 100.0%
3620094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 52.0 5.53e-01 79.4% 83.6%
3217770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 60.0 5.11e-01 87.3% 58.0%
4574546 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 55.0 5.49e-01 79.4% 80.0%
3765126 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 53.0 5.59e-01 74.6% 100.0%
3941391 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 50.0 5.11e-01 71.4% 73.3%
3510526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 53.0 5.62e-01 77.8% 87.3%
4026957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 53.0 5.46e-01 81.0% 80.0%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 51.0 5.42e-01 77.8% 83.6%
3218198 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 49.0 5.23e-01 76.2% 80.0%
3469800 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 54.0 4.96e-01 77.8% 75.0%
3241890 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.01e-01 87.3% 64.0%
3406803 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 59.0 5.72e-01 87.3% 90.0%
3913334 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 53.0 5.11e-01 81.0% 68.6%
5079023 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 49.0 5.56e-01 76.2% 100.0%
4061621 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 54.0 3.80e-01 79.4% 27.2%
3841414 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 55.0 5.34e-01 81.0% 78.6%
3930366 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 53.0 5.46e-01 77.8% 91.7%
4890270 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 49.0 5.28e-01 77.8% 83.3%
3408327 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 51.0 4.48e-01 79.4% 51.1%
4420340 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.54e-01 79.4% 88.3%
3578855 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 52.0 4.81e-01 76.2% 68.8%
4002896 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 52.0 4.60e-01 79.4% 53.3%
3216746 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 52.0 5.50e-01 76.2% 100.0%
5042892 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.72 52.0 5.40e-01 77.8% 83.3%
3909317 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 49.0 5.45e-01 71.4% 100.0%
3541241 4.1.1.8 ↗ beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.72 52.0 5.39e-01 81.0% 81.7%
3230400 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.19e-01 77.8% 96.9%
3484822 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.71 53.0 4.88e-01 79.4% 63.7%
4932609 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.19e-01 77.8% 78.5%
5074039 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 4.91e-01 77.8% 76.0%
2893010 4.1.1.8 ↗ beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.71 53.0 5.62e-01 79.4% 92.6%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 48.0 5.14e-01 77.8% 81.8%
4177200 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.71 52.0 5.45e-01 81.0% 89.1%
3938908 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.23e-01 82.5% 80.0%
4956443 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 51.0 5.27e-01 77.8% 83.3%
3617111 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 48.0 4.28e-01 79.4% 51.1%
5051313 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.06e-01 77.8% 80.0%
3927795 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 5.18e-01 77.8% 91.7%
5017214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 48.0 5.03e-01 77.8% 83.6%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.22e-01 81.0% 83.3%
3244430 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 51.0 4.29e-01 79.4% 48.6%
4047726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 50.0 4.62e-01 77.8% 77.5%
4284598 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.68 50.0 4.45e-01 77.8% 63.3%
3576438 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 51.0 4.50e-01 82.5% 55.6%
4816818 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 47.0 5.16e-01 76.2% 95.7%
3261235 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 50.0 4.54e-01 79.4% 60.0%
3492982 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.67 55.0 4.26e-01 88.9% 71.1%
4994957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 48.0 5.07e-01 79.4% 89.1%
3456496 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.67 52.0 4.29e-01 85.7% 57.4%
3223929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 54.0 4.11e-01 92.1% 43.9%
None — 0.66 59.0 3.28e-01 100.0% 85.6%
None — 0.66 58.0 3.25e-01 100.0% 78.5%
3914746 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.66 53.0 5.15e-01 100.0% 80.0%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 58.0 4.08e-01 100.0% 91.5%
5040416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 44.0 4.69e-01 77.8% 88.0%
3275404 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.83e-01 85.7% 81.7%
3875218 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.64 53.0 5.25e-01 100.0% 89.2%
3459218 5.1.3.159 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7595 0.63 45.0 2.77e-01 74.6% 94.8%
4062751 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.60 41.0 4.27e-01 73.0% 96.7%
5032509 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.57 36.0 3.60e-01 88.9% 63.1%
3648232 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 44.0 2.84e-01 93.7% 64.1%
3604264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 46.0 4.05e-01 100.0% 77.0%