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OQ974181.1__WKV22093.1__Phage2-1_00093__00092

Bact-Vir

OQ974181.1__WKV22093.1__Phage2-1_00093__00092

Identity

Accession:
OQ974181 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-54
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r31A01 3.30.2180.10 Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like 0.75 58.0 5.22e-01 85.4% 71.2%
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.69 48.0 5.19e-01 81.2% 92.3%
2dsyD00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.68 56.0 4.77e-01 93.8% 56.8%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.66 49.0 4.47e-01 95.8% 60.3%
4o8uA00 3.30.420.440 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF4152 0.65 45.0 2.92e-01 75.0% 84.6%
7uhyA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 52.0 3.21e-01 95.8% 20.3%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.62 51.0 2.94e-01 97.9% 24.9%
1ujrA01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.61 46.0 3.82e-01 81.2% 59.0%
2yugA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 45.0 3.21e-01 83.3% 54.2%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 51.0 3.11e-01 97.9% 18.6%
4cckA03 3.90.930.40 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.60 49.0 3.58e-01 95.8% 56.8%
2b5eA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 45.0 3.70e-01 85.4% 81.4%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 50.0 3.99e-01 100.0% 53.3%
1iv8A02 3.30.1590.10 Alpha Beta › 2-Layer Sandwich › Maltooligosyl trehalose synthase, domain 2 › Maltooligosyl trehalose synthase, domain 2 0.59 49.0 3.75e-01 93.8% 40.7%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 45.0 2.83e-01 87.5% 22.0%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 44.0 2.75e-01 89.6% 20.3%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.58 44.0 2.79e-01 89.6% 30.8%
2e9hA01 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.58 46.0 3.72e-01 97.9% 81.4%
5cxmA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.58 49.0 3.94e-01 100.0% 98.0%
2jhjA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.57 36.0 2.77e-01 79.2% 25.8%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.57 43.0 2.93e-01 87.5% 81.0%
2dx0B01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 46.0 4.05e-01 93.8% 77.3%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.56 47.0 3.74e-01 100.0% 71.4%
3uh0A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.56 46.0 3.55e-01 100.0% 68.5%
2qgoA00 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.55 41.0 3.16e-01 81.2% 68.4%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 43.0 2.66e-01 97.9% 15.8%
3d89A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.55 43.0 3.20e-01 89.6% 39.7%
4cy8A03 3.40.30.120 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.55 42.0 3.19e-01 100.0% 44.9%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 46.0 2.89e-01 100.0% 38.7%
7q5yB01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.54 41.0 3.13e-01 85.4% 40.0%
7ob9B02 3.90.1800.10 Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain 0.53 39.0 3.12e-01 95.8% 38.2%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.12e-01 93.8% 59.3%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 40.0 2.60e-01 93.8% 21.1%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 40.0 3.02e-01 100.0% 80.7%
2jiiA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.53 41.0 2.78e-01 89.6% 32.5%
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.52 42.0 2.84e-01 93.8% 37.0%
8dc1A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 41.0 2.69e-01 95.8% 22.1%
2ljwA00 3.30.428.40 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Protein of unknown function DUF3067 0.52 42.0 3.42e-01 100.0% 71.2%
2xvoB00 2.60.120.1670 Mainly Beta › Sandwich › Jelly Rolls › 0.52 38.0 2.81e-01 93.8% 70.7%
4blpB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 2.53e-01 87.5% 47.8%
1yuaA01 3.30.65.10 Alpha Beta › 2-Layer Sandwich › Bacterial Topoisomerase I; domain 1 › Bacterial Topoisomerase I, domain 1 0.51 40.0 3.71e-01 91.7% 73.4%
2cmzA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.51 41.0 3.36e-01 91.7% 58.1%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.07e-01 97.9% 65.4%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3364030 386.1.1.4 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.74 50.0 5.32e-01 91.7% 85.0%
3391564 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.74 55.0 5.44e-01 100.0% 78.0%
3714354 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.73 50.0 5.36e-01 100.0% 87.5%
4929446 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.72 47.0 3.30e-01 95.8% 20.6%
3365759 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.72 49.0 5.19e-01 93.8% 85.0%
4425056 64.1.1.4 beta meanders › WW domain-like › WW domain › WW domain › WW_1 0.72 47.0 5.11e-01 100.0% 91.4%
3924082 386.1.1.64 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_12 0.71 53.0 4.64e-01 100.0% 53.3%
3475436 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.70 56.0 4.92e-01 95.8% 60.0%
3483955 386.1.1.6 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 0.69 56.0 4.64e-01 97.9% 50.6%
3672734 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.69 51.0 3.90e-01 81.2% 35.7%
3331838 386.1.1.4 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.69 50.0 4.99e-01 95.8% 78.0%
3733350 2004.1.1.686 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, DEAD, Helicase_C 0.68 47.0 2.65e-01 95.8% 5.7%
3520428 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.68 54.0 4.02e-01 89.6% 34.4%
3450849 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.68 58.0 4.36e-01 100.0% 39.2%
3620992 386.1.1.4 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.67 50.0 4.96e-01 100.0% 80.0%
3351355 386.1.1.4 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.67 47.0 4.60e-01 100.0% 67.3%
3425319 2.1.1.87 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB 0.67 47.0 3.69e-01 100.0% 33.6%
3493489 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.66 45.0 4.53e-01 97.9% 70.0%
3997581 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 55.0 3.28e-01 97.9% 20.3%
3231766 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.65 46.0 4.95e-01 100.0% 92.5%
3524423 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.65 48.0 4.69e-01 95.8% 70.9%
3503283 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.65 45.0 4.61e-01 89.6% 77.8%
4310743 375.1.1.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 0.64 38.0 3.95e-01 93.8% 62.2%
3618047 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 52.0 3.31e-01 93.8% 96.1%
3550096 5.1.4.425 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR19_1st 0.63 48.0 2.95e-01 87.5% 19.4%
4259138 2484.1.1.68 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.63 55.0 3.53e-01 100.0% 88.1%
None 0.62 47.0 2.85e-01 87.5% 18.9%
907 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.62 44.0 3.37e-01 75.0% 44.5%
3185844 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.62 51.0 4.61e-01 95.8% 80.0%
5003460 375.1.1.9 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.61 51.0 4.37e-01 100.0% 88.2%
3365178 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.61 47.0 4.38e-01 100.0% 66.2%
3834402 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.61 46.0 2.83e-01 87.5% 27.0%
3404671 6.1.1.1 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF 0.61 50.0 3.70e-01 97.9% 77.0%
3438045 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.60 46.0 4.31e-01 100.0% 66.2%
4942943 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.60 49.0 3.92e-01 100.0% 71.8%
3409045 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.60 49.0 2.90e-01 95.8% 26.0%
3958912 296.1.1.0 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 0.60 49.0 4.02e-01 100.0% 69.0%
3618540 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 48.0 4.33e-01 100.0% 64.0%
3876524 386.1.1.303 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29350 0.60 43.0 4.28e-01 85.4% 75.5%
3437522 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.59 48.0 3.66e-01 97.9% 36.8%
4989457 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 47.0 4.67e-01 97.9% 96.0%
3577308 330.3.1.0 a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.58 45.0 4.48e-01 100.0% 87.3%
3838957 3439.1.1.0 a+b two layers › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain 0.57 48.0 4.37e-01 100.0% 74.3%
3725907 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 43.0 4.05e-01 100.0% 65.2%
3940247 4099.1.1.1 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD 0.57 45.0 3.55e-01 95.8% 60.8%
5014250 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 44.0 3.92e-01 93.8% 76.2%
3839750 2003.1.15.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Glycosyltransferase Maf N-terminal domain 0.57 47.0 3.11e-01 95.8% 75.2%
3535695 1021.1.1.2 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD 0.56 42.0 3.43e-01 83.3% 75.8%
3256497 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.56 42.0 3.08e-01 89.6% 50.9%
3261192 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 44.0 3.40e-01 93.8% 77.5%
3212281 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.55 41.0 2.56e-01 83.3% 68.0%
3320944 386.1.1.267 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C17orf113 0.55 42.0 3.94e-01 89.6% 75.4%
4205746 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.55 44.0 3.55e-01 91.7% 75.2%
5048568 4294.1.1.2 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p 0.54 43.0 3.02e-01 100.0% 46.3%
4024218 101.46.1.0 alpha arrays › HTH › Parafibromin N-terminal domain › Parafibromin N-terminal domain 0.54 43.0 3.47e-01 91.7% 86.0%
3839942 2003.1.5.62 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I 0.54 44.0 2.62e-01 97.9% 11.5%
4930899 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.54 42.0 3.79e-01 100.0% 58.7%
3294614 2002.1.1.192 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase 0.54 41.0 2.51e-01 89.6% 76.4%
3286579 2003.1.10.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Lant_dehydr_N 0.54 42.0 3.35e-01 85.4% 48.4%
4290521 2484.1.1.91 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Exu_RNase_H_like 0.54 47.0 2.95e-01 100.0% 72.8%
1866795 2484.1.1.91 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Exu_RNase_H_like 0.53 47.0 3.00e-01 100.0% 69.4%
4971974 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 40.0 2.82e-01 81.2% 96.2%
4416440 2007.1.4.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › PFK 0.53 39.0 2.66e-01 83.3% 78.0%
5033222 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.53 36.0 2.92e-01 72.9% 73.3%
3622446 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.52 36.0 3.30e-01 75.0% 70.0%
3921414 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.52 35.0 3.16e-01 75.0% 64.6%
4139409 375.14.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) 0.52 39.0 4.12e-01 95.8% 100.0%
4049910 375.14.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) 0.51 41.0 4.22e-01 89.6% 95.6%
2516891 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.50 39.0 2.49e-01 100.0% 23.0%