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OQ981145.1__WJZ46575.1__X__00112

Bact-Vir

OQ981145.1__WJZ46575.1__X__00112

Identity

Accession:
OQ981145 ↗
Kingdom:
phage

Quality

62.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Kayvirus› Staphylococcus_phage_Baghdad

TaxID: 3058784

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 81-128
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sr4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.74 64.0 4.42e-01 100.0% 82.6%
1pwaA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.74 62.0 4.73e-01 100.0% 91.1%
1jlxA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.73 62.0 4.52e-01 100.0% 97.1%
4govA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.72 58.0 4.23e-01 89.6% 60.3%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 61.0 4.46e-01 100.0% 48.9%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 4.87e-01 100.0% 79.2%
2ysiA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.67 39.0 4.53e-01 70.8% 81.8%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 55.0 5.40e-01 100.0% 88.2%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.66 49.0 4.70e-01 100.0% 70.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 4.95e-01 97.9% 73.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 5.00e-01 100.0% 84.0%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 5.03e-01 100.0% 88.0%
4j3vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 46.0 3.69e-01 79.2% 82.9%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 5.12e-01 100.0% 90.4%
2opiA00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.63 43.0 2.86e-01 72.9% 19.3%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 4.57e-01 100.0% 63.4%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 49.0 4.22e-01 100.0% 51.8%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.63 51.0 5.07e-01 100.0% 86.5%
3jb9K01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 51.0 3.18e-01 95.8% 22.4%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 4.26e-01 100.0% 54.2%
3odtA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 49.0 3.06e-01 93.8% 21.6%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.37e-01 100.0% 61.6%
2kxqA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.61 38.0 4.14e-01 91.7% 100.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 5.10e-01 100.0% 94.3%
2jxwA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.60 41.0 3.62e-01 89.6% 46.7%
2yshA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.60 37.0 4.07e-01 81.2% 87.9%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.59 40.0 4.02e-01 87.5% 66.7%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.59 45.0 4.57e-01 85.4% 91.3%
2wvxA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 46.0 2.89e-01 91.7% 77.6%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 49.0 4.28e-01 100.0% 70.9%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.64e-01 100.0% 87.7%
2dk1A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 40.0 3.98e-01 87.5% 68.0%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 4.23e-01 100.0% 64.9%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 4.66e-01 100.0% 96.1%
1ukcB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 43.0 2.56e-01 95.8% 33.3%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.53 42.0 3.11e-01 95.8% 60.4%
8dc1A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 41.0 2.72e-01 93.8% 20.2%
3le4A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.53 42.0 4.10e-01 89.6% 89.1%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 4.01e-01 100.0% 89.8%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 42.0 4.04e-01 100.0% 91.8%
4kc5D02 3.30.70.3290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 3.08e-01 89.6% 100.0%
2atcB02 2.30.30.20 Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain 0.52 40.0 3.97e-01 93.8% 96.2%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 37.0 2.44e-01 81.2% 46.7%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.52 36.0 3.62e-01 83.3% 98.1%
4xr7E01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 41.0 2.61e-01 100.0% 23.7%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 38.0 3.68e-01 87.5% 94.9%
1nktA02 3.90.1440.10 Alpha Beta › Alpha-Beta Complex › Pre-protein croslinking domain of SecA › SecA, preprotein cross-linking domain 0.51 34.0 2.73e-01 95.8% 28.7%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 61.0 5.92e-01 100.0% 80.0%
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.53e-01 100.0% 76.7%
4972872 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 56.0 5.75e-01 100.0% 95.6%
4990212 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.58e-01 100.0% 81.8%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.42e-01 100.0% 78.2%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.44e-01 100.0% 81.8%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.27e-01 100.0% 78.2%
5013892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.58e-01 100.0% 83.6%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.69 51.0 4.80e-01 100.0% 65.0%
4997767 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 5.17e-01 87.5% 86.7%
4000033 220.1.1.119 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th 0.69 58.0 4.49e-01 100.0% 63.5%
5058270 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 54.0 5.13e-01 100.0% 73.3%
2697704 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 54.0 4.87e-01 100.0% 64.6%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 54.0 5.19e-01 100.0% 80.0%
4998148 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 52.0 5.03e-01 100.0% 78.2%
5063537 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 51.0 4.80e-01 100.0% 68.3%
3366578 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.67 56.0 4.15e-01 100.0% 37.5%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 50.0 4.88e-01 100.0% 74.5%
4990359 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 51.0 4.76e-01 100.0% 67.7%
4357819 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.66 55.0 4.86e-01 100.0% 64.3%
3961013 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 50.0 4.58e-01 100.0% 61.4%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.03e-01 100.0% 81.8%
5067372 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 51.0 4.83e-01 100.0% 71.7%
5070745 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 4.92e-01 91.7% 86.7%
3931905 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 54.0 4.09e-01 100.0% 39.1%
3347504 4.2.1.4 ↗ beta barrels › SH3 › SAND › SAND › TDBD 0.65 56.0 5.03e-01 100.0% 75.7%
4981036 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 51.0 5.25e-01 100.0% 95.6%
4979962 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 51.0 4.72e-01 100.0% 67.7%
5044373 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 51.0 4.88e-01 100.0% 75.0%
5075805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.81e-01 100.0% 78.2%
3721794 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.14e-01 100.0% 76.7%
4372288 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.65 54.0 5.03e-01 100.0% 75.0%
3785788 5.1.4.31 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C 0.65 50.0 2.90e-01 91.7% 15.9%
4200330 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.65 53.0 3.95e-01 100.0% 36.0%
3194124 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.64 42.0 2.68e-01 89.6% 14.2%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.35e-01 100.0% 52.9%
3577993 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 50.0 3.30e-01 95.8% 31.2%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 55.0 5.00e-01 100.0% 73.8%
3294392 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.63 52.0 4.38e-01 100.0% 54.1%
3999197 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.63 52.0 3.11e-01 95.8% 24.6%
3616243 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.99e-01 100.0% 81.8%
3240406 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.62 53.0 4.02e-01 100.0% 40.0%
3799937 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 49.0 2.92e-01 95.8% 17.4%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.92e-01 100.0% 81.8%
3830187 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 52.0 5.00e-01 100.0% 83.6%
3704356 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.49e-01 100.0% 60.0%
4629022 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.62 51.0 4.58e-01 100.0% 65.7%
3378508 5.1.4.231 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FBA_3 0.62 51.0 3.23e-01 100.0% 33.7%
4147366 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.61 51.0 5.11e-01 100.0% 93.8%
3358753 4.1.1.381 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.61 54.0 3.70e-01 100.0% 29.1%
3169607 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.61 50.0 4.39e-01 100.0% 60.0%
3517728 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.61 51.0 4.59e-01 100.0% 65.7%
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 51.0 4.34e-01 100.0% 57.5%
134360 252.2.1.3 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_1 0.61 44.0 4.14e-01 100.0% 62.5%
None — 0.60 49.0 2.73e-01 100.0% 5.8%
1108894 4.1.1.122 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_17 0.60 52.0 5.03e-01 100.0% 88.9%
3290160 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.60 51.0 4.41e-01 100.0% 71.2%
3398093 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.60 49.0 4.66e-01 100.0% 76.7%
3468658 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 47.0 2.94e-01 95.8% 15.0%
3509582 375.1.1.184 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TOP3B 0.59 47.0 3.26e-01 93.8% 38.9%
3881124 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 49.0 4.05e-01 100.0% 52.2%
3261395 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.47e-01 100.0% 77.6%
3330943 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.58 48.0 4.69e-01 100.0% 85.5%
3750824 5.1.5.75 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.58 49.0 3.01e-01 100.0% 25.4%
3328618 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.57 41.0 4.31e-01 89.6% 90.0%
4121981 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.57 50.0 3.76e-01 100.0% 38.4%
4932460 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.57 43.0 4.07e-01 87.5% 95.2%
4210485 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.57 49.0 4.49e-01 100.0% 75.4%
5016488 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 42.0 4.03e-01 87.5% 100.0%
4026957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.43e-01 100.0% 78.3%
4937684 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 43.0 4.12e-01 89.6% 93.3%
3253491 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 39.0 3.68e-01 95.8% 60.0%
4964195 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.54 43.0 3.84e-01 93.8% 82.7%
4849045 233.1.1.0 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain 0.53 40.0 2.87e-01 89.6% 84.4%
3778614 233.1.1.5 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_2 0.51 38.0 2.73e-01 91.7% 74.9%