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OQ992551.1__WNV48537.1__X__00032

Bact-Vir

OQ992551.1__WNV48537.1__X__00032

Identity

Accession:
OQ992551 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bruynoghevirus› Pseudomonas_phage_Teru

TaxID: 3046814

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-73
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nppA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.66 44.0 4.06e-01 70.8% 71.3%
2lttA00 2.30.31.70 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.65 44.0 4.25e-01 70.8% 68.9%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.63 48.0 3.38e-01 92.3% 27.3%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.62 54.0 3.30e-01 100.0% 31.3%
3eyrA00 3.15.10.40 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 0.60 51.0 3.88e-01 100.0% 65.1%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.59 50.0 3.10e-01 100.0% 44.8%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 50.0 3.19e-01 100.0% 27.1%
4ak1A02 2.30.30.1270 Mainly Beta › Roll › SH3 type barrels. › 0.57 39.0 4.01e-01 73.8% 85.9%
4ffgA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 48.0 3.14e-01 100.0% 30.1%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 41.0 3.42e-01 76.9% 72.4%
4aw8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 49.0 3.58e-01 100.0% 69.9%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 4.07e-01 100.0% 94.5%
1f2uB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 38.0 3.00e-01 100.0% 31.7%
6jy5B00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.56 37.0 3.52e-01 70.8% 87.8%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.55 41.0 3.83e-01 90.8% 63.1%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 46.0 3.04e-01 100.0% 33.7%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.55 40.0 4.26e-01 90.8% 89.3%
7sz2A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.54 46.0 4.10e-01 92.3% 83.7%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 42.0 4.41e-01 92.3% 91.7%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.54 47.0 3.74e-01 100.0% 61.3%
2jzlA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.54 45.0 3.91e-01 100.0% 84.7%
2jo6A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.53 44.0 3.70e-01 92.3% 88.2%
4fxdA05 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.52 43.0 3.58e-01 92.3% 93.2%
7q5yB01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.52 37.0 3.04e-01 73.8% 66.7%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 35.0 3.53e-01 70.8% 80.6%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.52 43.0 3.31e-01 100.0% 40.2%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 43.0 3.74e-01 98.5% 85.2%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.51 42.0 3.44e-01 98.5% 61.3%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 38.0 3.29e-01 81.5% 88.5%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 39.0 2.74e-01 83.1% 81.3%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.50 42.0 3.67e-01 100.0% 81.5%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3913782 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 60.0 6.06e-01 87.7% 87.5%
3721700 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 61.0 4.56e-01 93.8% 66.3%
3911065 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 61.0 5.70e-01 100.0% 77.5%
3886492 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.69 58.0 5.52e-01 93.8% 80.0%
4957350 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 51.0 5.13e-01 98.5% 80.0%
3584555 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.68 56.0 5.50e-01 92.3% 88.6%
3627576 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.63e-01 92.3% 95.4%
3709896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.17e-01 92.3% 82.4%
3960589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 4.82e-01 98.5% 69.2%
3730835 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.67 55.0 4.93e-01 100.0% 64.2%
5043533 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.29e-01 93.8% 90.6%
5053224 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 52.0 5.40e-01 93.8% 98.3%
4040055 4.26.1.1 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.64 48.0 4.98e-01 89.2% 93.1%
3197575 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.63 43.0 3.89e-01 72.3% 75.6%
4377781 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 52.0 4.95e-01 98.5% 82.5%
3282644 2.24.1.2 ↗ beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF7489 0.61 42.0 4.24e-01 72.3% 95.4%
3505939 270.1.1.1 ↗ beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Pur_DNA_glyco 0.61 47.0 4.06e-01 87.7% 91.8%
5059830 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.60 51.0 4.66e-01 98.5% 80.0%
3760460 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 47.0 4.67e-01 93.8% 98.5%
4330191 304.102.1.0 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase 0.58 49.0 3.42e-01 100.0% 29.0%
5080510 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.57 46.0 4.09e-01 89.2% 76.8%
4139867 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.56 39.0 3.44e-01 80.0% 49.5%
3724000 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 41.0 3.30e-01 76.9% 43.3%
5079843 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.56 45.0 4.50e-01 95.4% 90.8%
3197280 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 47.0 3.03e-01 100.0% 22.3%
3286642 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 44.0 3.73e-01 87.7% 53.6%
2629709 4252.1.1.3 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.55 45.0 3.28e-01 98.5% 88.0%
3062081 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.55 44.0 2.83e-01 100.0% 44.8%
4868829 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.55 39.0 3.22e-01 76.9% 63.7%
None — 0.55 43.0 2.79e-01 87.7% 27.3%
3297629 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.55 44.0 4.20e-01 90.8% 75.0%
3393084 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.55 41.0 3.84e-01 83.1% 65.0%
None — 0.54 43.0 2.78e-01 87.7% 27.7%
3221443 5.1.4.61 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N 0.54 47.0 2.99e-01 100.0% 37.7%
3923810 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.54 41.0 3.50e-01 84.6% 73.0%
None — 0.53 42.0 2.72e-01 87.7% 28.9%
3237464 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 42.0 2.71e-01 87.7% 25.4%
4080312 4312.1.1.17 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF1609 0.53 36.0 2.85e-01 72.3% 47.7%
3999104 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 37.0 3.13e-01 76.9% 70.8%
3510862 5.1.4.173 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd 0.52 45.0 2.84e-01 100.0% 29.5%
3486847 4.1.1.284 ↗ beta barrels › SH3 › SH3 › SH3 › SBNO 0.51 41.0 3.61e-01 92.3% 58.1%
4159881 220.1.1.197 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 0.51 42.0 3.79e-01 95.4% 73.7%
3255320 4096.1.1.1 ↗ a+b two layers › NAP-like › NAP-like › NAP-like › NAP 0.51 43.0 3.22e-01 100.0% 70.3%
4929665 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 41.0 3.13e-01 89.2% 94.8%
3498580 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.51 44.0 2.70e-01 100.0% 42.8%
4927943 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 41.0 4.02e-01 92.3% 88.6%
3840563 11.1.1.67 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.50 39.0 2.90e-01 84.6% 72.4%
3744517 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.50 37.0 3.08e-01 80.0% 82.5%
3987711 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.50 42.0 2.75e-01 98.5% 30.6%
3787501 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.50 36.0 2.91e-01 78.5% 92.1%
D2 medium residues 82-188
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dbxA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.55 47.0 3.99e-01 95.3% 85.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3456571 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 39.0 3.05e-01 85.0% 88.9%