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OQ992554.1__WNV48785.1__X__00036
Bact-VirOQ992554.1__WNV48785.1__X__00036
Identity
- Accession:
- OQ992554 ↗
- Kingdom:
- phage
Quality
76.9
mean pLDDT
Taxonomy
TaxID: 3046817
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-90
Domain cluster:
rep: NC_041880.1__YP_009595356.1__FDG97_gp219__00131__D6-93
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lvaA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.82 | 42.0 | 5.49e-01 | 93.8% | 90.9% |
| 1ufzA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.78 | 44.0 | 5.12e-01 | 85.0% | 77.6% |
| 4dbgB02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.68 | 48.0 | 5.46e-01 | 80.0% | 96.7% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.67 | 40.0 | 3.87e-01 | 92.5% | 52.2% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.65 | 43.0 | 4.79e-01 | 71.2% | 90.0% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.63 | 48.0 | 4.02e-01 | 83.7% | 68.3% |
| 1qlbA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.60 | 46.0 | 4.03e-01 | 93.8% | 55.9% |
| 3dzaA01 | 1.20.120.1940 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YfdX protein domain | 0.59 | 40.0 | 3.61e-01 | 98.8% | 48.7% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.58 | 43.0 | 4.27e-01 | 95.0% | 74.1% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.57 | 34.0 | 3.85e-01 | 71.2% | 80.7% |
| 2rinA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 47.0 | 3.76e-01 | 95.0% | 92.1% |
| 4gycA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 51.0 | 3.72e-01 | 100.0% | 73.2% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 43.0 | 4.43e-01 | 82.5% | 89.2% |
| 2ppqA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.55 | 47.0 | 3.56e-01 | 100.0% | 89.7% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 46.0 | 4.11e-01 | 93.8% | 71.9% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 31.0 | 3.55e-01 | 92.5% | 76.7% |
| 2hraA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 35.0 | 3.41e-01 | 93.8% | 58.2% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 42.0 | 4.14e-01 | 95.0% | 79.1% |
| 1kc0A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 3.04e-01 | 95.0% | 30.5% |
| 4h17A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.53 | 39.0 | 2.95e-01 | 78.8% | 42.6% |
| 2fsjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 38.0 | 3.26e-01 | 78.8% | 86.2% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.52 | 44.0 | 3.72e-01 | 100.0% | 97.3% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.52 | 44.0 | 3.79e-01 | 92.5% | 98.4% |
| 6n6qD00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 39.0 | 2.54e-01 | 86.3% | 40.0% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 44.0 | 3.98e-01 | 100.0% | 70.3% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.50 | 42.0 | 3.94e-01 | 96.2% | 75.7% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4207508 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.81 | 46.0 | 5.44e-01 | 87.5% | 81.8% |
| 3930619 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.71 | 43.0 | 5.19e-01 | 83.7% | 96.0% |
| 3898675 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.71 | 51.0 | 4.86e-01 | 98.8% | 64.5% |
| 3862038 | 103.1.1.142 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_Sid-3 | 0.70 | 50.0 | 5.20e-01 | 98.8% | 80.0% |
| 3356408 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.68 | 57.0 | 4.92e-01 | 98.8% | 59.2% |
| 3216703 | 103.1.1.142 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_Sid-3 | 0.68 | 50.0 | 5.15e-01 | 98.8% | 81.3% |
| 1031361 | 103.1.1.50 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › EF-Ts_N | 0.68 | 43.0 | 4.68e-01 | 95.0% | 79.7% |
| 3411587 | 103.1.1.85 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28528 | 0.67 | 51.0 | 5.48e-01 | 96.2% | 92.9% |
| 3938417 | 601.39.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Enhancer of filamentation 1 › Enhancer of filamentation 1 › Serine_rich | 0.63 | 49.0 | 3.88e-01 | 83.7% | 55.6% |
| 3398463 | 103.1.1.142 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_Sid-3 | 0.62 | 45.0 | 4.70e-01 | 98.8% | 82.7% |
| 3905639 | 103.1.1.142 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_Sid-3 | 0.61 | 51.0 | 4.91e-01 | 88.7% | 97.8% |
| 3406664 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.60 | 46.0 | 4.79e-01 | 96.2% | 86.7% |
| 5050590 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.59 | 51.0 | 3.44e-01 | 100.0% | 54.2% |
| 5051149 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.59 | 49.0 | 3.32e-01 | 91.3% | 56.5% |
| 3993029 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.59 | 46.0 | 4.36e-01 | 83.7% | 75.8% |
| 3170204 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.58 | 51.0 | 4.26e-01 | 97.5% | 85.2% |
| 4104119 | 604.12.1.9 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 | 0.55 | 42.0 | 4.10e-01 | 82.5% | 80.7% |
| 3770414 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 46.0 | 4.20e-01 | 93.8% | 87.6% |
| 3829016 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.53 | 43.0 | 3.72e-01 | 92.5% | 56.0% |
| 3253853 | 109.4.1.1665 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30377 | 0.53 | 46.0 | 3.09e-01 | 100.0% | 33.9% |
| 3371182 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.53 | 44.0 | 4.05e-01 | 92.5% | 97.1% |
| 3637478 | 131.2.1.3 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › PolyA_pol_RNAbd | 0.51 | 37.0 | 2.56e-01 | 80.0% | 32.5% |
| 3470544 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.51 | 44.0 | 4.16e-01 | 93.8% | 89.5% |
| 3782089 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.51 | 42.0 | 3.39e-01 | 93.8% | 57.0% |
| 4834320 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.50 | 43.0 | 4.01e-01 | 100.0% | 78.3% |