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OQ992554.1__WNV48892.1__X__00143

Bact-Vir

OQ992554.1__WNV48892.1__X__00143

Identity

Accession:
OQ992554 ↗
Kingdom:
phage

Quality

45.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Pakpunavirus› Pseudomonas_phage_Kat

TaxID: 3046817

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 143-224
PDB
D2 high residues 236-317
PDB
Domain cluster: rep: MH133207.1__AWD93208.1__AB9_088__00088__D271-354
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2d05A02 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.63 43.0 3.86e-01 90.2% 52.3%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.61 57.0 4.52e-01 100.0% 86.5%
7odyC01 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.60 31.0 2.97e-01 95.1% 44.6%
1g2rA00 3.30.1230.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like 0.60 42.0 4.07e-01 74.4% 90.4%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 50.0 5.25e-01 98.8% 97.3%
1w9rA00 1.20.58.440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A 0.59 51.0 4.52e-01 96.3% 77.3%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.58 49.0 3.81e-01 92.7% 65.7%
3emlA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.57 47.0 3.28e-01 92.7% 32.6%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.55 46.0 4.84e-01 97.6% 100.0%
3beeA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 38.0 3.73e-01 87.8% 65.9%
7cjsB01 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.55 47.0 3.54e-01 97.6% 91.1%
7ys6A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.55 46.0 3.29e-01 96.3% 34.8%
1vt0k00 1.10.3230.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) 0.54 47.0 3.94e-01 100.0% 72.4%
6ljaA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.54 44.0 2.95e-01 92.7% 55.8%
5ci5B02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 41.0 3.11e-01 89.0% 76.9%
2jbwA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.51 46.0 4.25e-01 100.0% 99.0%
1rt8A04 1.10.418.10 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain 0.51 35.0 3.24e-01 73.2% 70.6%
3dupB01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.50 37.0 2.95e-01 78.0% 99.4%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4159522 3724.1.1.0 ↗ alpha arrays › Phosphoinositide phosphatase C-terminal helical domain › Phosphoinositide phosphatase C-terminal helical domain › Phosphoinositide phosphatase C-terminal helical domain 0.72 45.0 4.15e-01 96.3% 49.5%
4936733 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.70 49.0 4.23e-01 97.6% 49.2%
3721606 3924.1.1.0 ↗ alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.66 58.0 4.29e-01 100.0% 42.2%
3926402 639.2.1.0 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.64 49.0 5.04e-01 96.3% 83.7%
3207996 109.4.1.681 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 0.63 51.0 3.24e-01 86.6% 32.5%
4963078 3843.1.1.0 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.62 53.0 5.11e-01 95.1% 90.5%
4010899 3924.1.1.0 ↗ alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.62 53.0 4.06e-01 100.0% 52.4%
3543076 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.61 55.0 4.15e-01 100.0% 87.5%
3764968 109.4.1.14 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MyTH4 0.60 47.0 3.54e-01 82.9% 55.3%
3718422 5054.1.1.61 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › ELO 0.60 52.0 3.82e-01 96.3% 65.8%
3817153 4207.1.1.0 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) 0.60 52.0 4.77e-01 95.1% 85.7%
3511626 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.60 42.0 3.28e-01 73.2% 81.2%
3582455 3843.1.1.0 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.59 48.0 5.03e-01 97.6% 98.7%
3511170 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.57 45.0 4.74e-01 100.0% 90.7%
3170204 7015.1.1.0 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.56 49.0 4.23e-01 100.0% 67.4%
5080538 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 51.0 4.18e-01 100.0% 93.3%
3686989 109.4.1.345 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Gcn1_N 0.56 41.0 2.53e-01 80.5% 38.3%
3379886 604.12.1.85 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › 14-3-3 0.54 44.0 4.27e-01 100.0% 80.9%
3935407 109.4.1.14 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MyTH4 0.54 43.0 3.29e-01 90.2% 85.7%
3723685 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 45.0 3.21e-01 100.0% 30.2%
4029952 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.52 48.0 3.65e-01 100.0% 74.6%
3965414 4038.1.1.6 ↗ alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › P22_portal 0.51 33.0 2.08e-01 76.8% 11.8%
4488200 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.50 45.0 4.12e-01 100.0% 93.6%
4187503 102.1.4.1 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Nop 0.50 41.0 3.63e-01 92.7% 87.2%
D3 medium residues 10-82
PDB