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OQ992554.1__WNV48915.1__X__00166

Bact-Vir

OQ992554.1__WNV48915.1__X__00166

Identity

Accession:
OQ992554 ↗
Kingdom:
phage

Quality

76.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Pakpunavirus› Pseudomonas_phage_Kat

TaxID: 3046817

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-61
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 66.0 6.96e-01 100.0% 94.1%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 62.0 5.72e-01 100.0% 63.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 62.0 6.49e-01 100.0% 88.2%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 63.0 6.30e-01 100.0% 79.7%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 66.0 6.64e-01 100.0% 86.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 67.0 6.92e-01 100.0% 94.3%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 65.0 6.33e-01 100.0% 79.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 61.0 6.16e-01 100.0% 82.1%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 60.0 5.08e-01 100.0% 51.1%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.79 56.0 5.76e-01 100.0% 79.6%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 58.0 5.36e-01 100.0% 61.6%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.78 70.0 5.83e-01 100.0% 62.9%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 57.0 5.98e-01 100.0% 86.5%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 58.0 6.30e-01 96.5% 100.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 56.0 5.46e-01 100.0% 73.0%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 57.0 5.85e-01 100.0% 87.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.73 51.0 5.50e-01 94.7% 91.3%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.73 58.0 6.10e-01 100.0% 98.0%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.72 52.0 5.41e-01 100.0% 88.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 63.0 5.63e-01 100.0% 69.6%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 4.72e-01 100.0% 44.5%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.71 54.0 4.58e-01 100.0% 49.0%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 60.0 5.80e-01 100.0% 84.4%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 59.0 5.91e-01 100.0% 93.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 60.0 5.77e-01 100.0% 85.9%
1wjsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 56.0 4.29e-01 100.0% 40.2%
2rhiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 4.45e-01 100.0% 45.5%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 59.0 5.84e-01 100.0% 93.2%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 54.0 4.54e-01 100.0% 51.0%
1vwxY00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 58.0 4.38e-01 100.0% 40.3%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.67 54.0 5.15e-01 100.0% 77.6%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.65 49.0 4.90e-01 100.0% 80.0%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 55.0 5.47e-01 96.5% 98.3%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 4.12e-01 100.0% 41.7%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 55.0 5.22e-01 100.0% 87.1%
1khiA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 46.0 4.22e-01 77.2% 91.7%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.63 53.0 3.87e-01 100.0% 78.9%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.62 52.0 3.75e-01 100.0% 73.9%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 51.0 4.59e-01 100.0% 66.7%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.61 48.0 4.66e-01 100.0% 77.3%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.59 48.0 3.29e-01 96.5% 69.8%
6jwfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 45.0 2.86e-01 94.7% 39.7%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 49.0 4.72e-01 100.0% 86.8%
2l55A00 2.40.50.320 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF 0.57 46.0 4.14e-01 91.2% 85.4%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 47.0 4.40e-01 100.0% 78.1%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 46.0 4.32e-01 100.0% 84.2%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 46.0 3.92e-01 100.0% 58.0%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.32e-01 100.0% 85.9%
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 4.14e-01 100.0% 82.1%
2do8A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.54 45.0 3.33e-01 100.0% 84.6%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.52 40.0 2.97e-01 94.7% 29.3%
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 38.0 3.42e-01 82.5% 62.8%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5000308 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.87 66.0 7.12e-01 100.0% 93.9%
3660922 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.86 67.0 6.37e-01 100.0% 72.3%
3366578 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.85 65.0 5.04e-01 100.0% 39.2%
3456496 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.84 67.0 5.24e-01 100.0% 42.6%
4024915 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.83 65.0 6.22e-01 100.0% 73.8%
3721794 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 63.0 6.19e-01 100.0% 76.7%
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.82 63.0 6.53e-01 100.0% 87.0%
3598285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 70.0 6.50e-01 100.0% 75.7%
3937194 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.81 65.0 6.19e-01 100.0% 75.4%
3270324 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.79 61.0 6.51e-01 100.0% 94.0%
4078120 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.78 64.0 6.57e-01 100.0% 92.7%
3881123 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 57.0 4.98e-01 100.0% 54.1%
3264883 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.76 59.0 6.00e-01 100.0% 87.3%
3616007 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.75 58.0 5.98e-01 100.0% 87.3%
3841414 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 62.0 5.74e-01 100.0% 74.3%
4994549 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.73 62.0 4.38e-01 100.0% 32.1%
5054535 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.72 62.0 4.91e-01 100.0% 48.2%
4140958 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 59.0 5.47e-01 100.0% 72.0%
3931418 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 61.0 6.02e-01 100.0% 90.0%
4279051 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.70 60.0 4.83e-01 100.0% 50.5%
3638174 4.1.1.320 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.70 53.0 4.51e-01 100.0% 49.5%
3966783 219.1.1.77 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 0.70 62.0 4.22e-01 100.0% 33.7%
4417349 4.1.1.295 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.70 59.0 4.80e-01 100.0% 50.5%
1545879 4.1.1.120 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_16 0.70 62.0 5.12e-01 100.0% 100.0%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 60.0 5.74e-01 100.0% 83.1%
3718664 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.69 59.0 4.10e-01 100.0% 72.6%
3487003 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 4.42e-01 100.0% 40.0%
3356605 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 61.0 5.23e-01 100.0% 78.9%
3937808 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 4.54e-01 100.0% 45.7%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 61.0 5.35e-01 100.0% 74.1%
3890362 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.32e-01 93.0% 85.7%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.68 55.0 5.45e-01 100.0% 85.0%
3397026 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.68 55.0 3.57e-01 100.0% 20.4%
3797511 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 55.0 4.70e-01 100.0% 54.7%
3313139 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 60.0 4.25e-01 100.0% 41.7%
3645395 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 60.0 5.37e-01 100.0% 88.7%
3700770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.51e-01 100.0% 88.3%
3294025 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 55.0 5.60e-01 93.0% 100.0%
4943161 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.67 58.0 4.43e-01 100.0% 42.3%
4598958 4113.1.1.0 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like 0.67 57.0 4.08e-01 100.0% 76.1%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 59.0 5.30e-01 100.0% 90.0%
3553983 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.66 54.0 5.33e-01 100.0% 85.0%
3812766 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 59.0 5.56e-01 100.0% 85.7%
4099546 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.66 56.0 4.09e-01 100.0% 77.0%
3925589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 60.0 5.59e-01 100.0% 88.6%
4347828 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.41e-01 100.0% 90.0%
3520308 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 56.0 4.72e-01 100.0% 60.0%
4555816 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.78e-01 100.0% 65.9%
4220126 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 55.0 4.83e-01 100.0% 68.2%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 5.04e-01 100.0% 80.0%
3729666 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 54.0 4.37e-01 100.0% 52.7%
2673679 517.2.1.1 ↗ beta barrels › CBF-like › TraF › TraF › TrbI 0.60 44.0 3.48e-01 84.2% 70.4%
3715818 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.59 47.0 4.09e-01 100.0% 55.8%
2391272 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.59 48.0 4.12e-01 100.0% 57.0%
3890091 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.58 47.0 4.29e-01 100.0% 66.3%
4470741 4.1.1.400 ↗ beta barrels › SH3 › SH3 › SH3 › Spore-coat_CotZ 0.58 50.0 4.05e-01 100.0% 82.6%
3506156 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.56 45.0 4.20e-01 100.0% 70.7%
5075579 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.31e-01 100.0% 75.0%
4876572 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.55 46.0 4.08e-01 100.0% 63.6%
4015537 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 47.0 4.29e-01 100.0% 73.1%
3203375 219.1.1.129 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF7770 0.55 45.0 3.64e-01 100.0% 46.9%
5048425 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 47.0 4.25e-01 100.0% 93.8%
3598657 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 46.0 3.95e-01 100.0% 60.0%
5000810 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.55 46.0 4.15e-01 100.0% 70.6%
3592930 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 46.0 3.98e-01 100.0% 62.1%
4029204 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.54 45.0 4.05e-01 100.0% 69.4%
4876565 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.53 44.0 3.94e-01 100.0% 65.6%
4960287 375.1.1.9 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.52 41.0 3.65e-01 93.0% 78.9%
4276265 6012.1.1.0 ↗ few secondary structure elements › Antimicrobial peptide LCI › Antimicrobial peptide LCI › Antimicrobial peptide LCI 0.51 31.0 3.36e-01 77.2% 82.5%
3660188 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.50 31.0 2.97e-01 91.2% 47.1%
3601665 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 42.0 3.14e-01 100.0% 67.7%