←Back to structures

OQ992557.1__WNV49108.1__X__00006

Bact-Vir

OQ992557.1__WNV49108.1__X__00006

Identity

Accession:
OQ992557 ↗
Kingdom:
phage

Quality

72.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mesyanzhinovviridae› Yuavirus› Pseudomonas_phage_Chuck

TaxID: 3046820

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-71
PDB
Domain cluster: rep: OQ135105.1__WCD56198.1__X__00012__D6-60
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 54.0 6.22e-01 100.0% 90.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 53.0 5.75e-01 100.0% 79.7%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 54.0 6.24e-01 100.0% 94.1%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 52.0 6.23e-01 97.1% 100.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 50.0 5.55e-01 100.0% 82.1%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.78 46.0 5.51e-01 95.7% 91.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 48.0 5.57e-01 100.0% 91.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 49.0 5.50e-01 100.0% 86.5%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 52.0 5.66e-01 100.0% 86.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 47.0 4.68e-01 100.0% 61.6%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 54.0 5.15e-01 100.0% 69.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 46.0 5.14e-01 100.0% 87.0%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 52.0 5.46e-01 100.0% 85.9%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.68 51.0 4.43e-01 100.0% 52.3%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.29e-01 100.0% 60.2%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.64 51.0 4.63e-01 100.0% 62.9%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.64 42.0 3.84e-01 100.0% 49.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 45.0 4.58e-01 100.0% 79.1%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 40.0 4.41e-01 100.0% 92.3%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.60 47.0 3.41e-01 100.0% 28.6%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 47.0 4.78e-01 100.0% 88.2%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.13e-01 100.0% 67.9%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.57 49.0 3.77e-01 100.0% 78.9%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.56 47.0 3.57e-01 100.0% 73.9%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.54 47.0 4.10e-01 98.6% 77.1%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.53 47.0 3.49e-01 100.0% 39.5%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.51 46.0 3.24e-01 100.0% 34.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3240406 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.83 54.0 4.51e-01 100.0% 40.9%
4629022 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.81 52.0 5.24e-01 100.0% 65.7%
4024915 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.79 53.0 5.46e-01 100.0% 73.8%
959119 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.77 52.0 5.79e-01 100.0% 90.7%
3233461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 58.0 6.29e-01 100.0% 93.3%
3456496 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.76 52.0 4.33e-01 100.0% 42.6%
4078120 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.76 53.0 5.84e-01 100.0% 92.7%
3781710 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.76 53.0 5.09e-01 100.0% 63.7%
3601190 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 65.0 5.46e-01 100.0% 80.9%
3715486 4.1.1.235 ↗ beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 0.71 65.0 5.22e-01 100.0% 71.5%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 52.0 5.41e-01 100.0% 83.1%
3294025 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 52.0 5.79e-01 94.3% 100.0%
3616007 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.70 46.0 5.09e-01 100.0% 87.3%
4196537 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.69 52.0 5.13e-01 98.6% 76.0%
3638174 4.1.1.320 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.69 45.0 4.09e-01 100.0% 49.5%
3308545 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.69 46.0 3.52e-01 92.9% 30.6%
3886032 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.67 50.0 4.41e-01 100.0% 54.3%
5074039 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 51.0 5.01e-01 100.0% 76.0%
3936468 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 45.0 4.05e-01 100.0% 50.0%
1391581 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.66 43.0 3.95e-01 100.0% 50.5%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 52.0 4.92e-01 100.0% 74.1%
3399407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 57.0 5.05e-01 100.0% 87.0%
4335951 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 44.0 4.38e-01 100.0% 72.6%
3601070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 5.16e-01 100.0% 92.3%
3672185 304.59.1.4 ↗ a+b two layers › Alpha-beta plaits › MTH889-like › MTH889-like › GUB_WAK_bind 0.62 53.0 3.87e-01 94.3% 82.1%
3884661 4.1.1.382 ↗ beta barrels › SH3 › SH3 › SH3 › PF31078 0.61 51.0 4.44e-01 100.0% 60.0%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 55.0 5.19e-01 100.0% 97.6%
3514522 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.61 51.0 5.04e-01 100.0% 86.7%
4106867 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.61 33.0 2.59e-01 100.0% 26.4%
3925589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.94e-01 100.0% 88.6%
3504086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 56.0 5.10e-01 100.0% 85.6%
3718664 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.60 52.0 3.79e-01 100.0% 72.6%
3890362 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.83e-01 94.3% 85.7%
3624524 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.60 48.0 4.02e-01 100.0% 50.4%
3937808 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 3.98e-01 100.0% 46.4%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.56e-01 100.0% 80.0%
3302391 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.59 53.0 4.20e-01 100.0% 51.4%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 52.0 5.03e-01 100.0% 90.0%
4639593 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.58 50.0 3.82e-01 100.0% 82.2%
3669214 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.58 53.0 4.26e-01 100.0% 56.2%
3357239 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.58 53.0 4.01e-01 100.0% 45.6%
3668420 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.58 52.0 3.80e-01 100.0% 38.4%
None — 0.58 52.0 3.23e-01 100.0% 18.0%
4162968 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.58 46.0 4.47e-01 100.0% 77.2%
3911248 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 53.0 4.85e-01 100.0% 90.0%
4228570 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.53e-01 100.0% 78.8%
3816455 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.57 52.0 4.25e-01 100.0% 57.6%
3425872 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.57 51.0 4.67e-01 98.6% 80.0%
3300226 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.57 51.0 4.89e-01 100.0% 90.0%
3332609 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.57 49.0 4.04e-01 95.7% 55.2%
5039349 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.69e-01 98.6% 100.0%
3611491 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.54 46.0 3.47e-01 100.0% 76.9%
3251414 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 45.0 3.90e-01 98.6% 59.1%
3306580 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 41.0 4.42e-01 88.6% 96.7%
3788453 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 44.0 2.97e-01 92.9% 36.5%
5027789 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.54 49.0 4.30e-01 100.0% 74.0%
3402051 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.53 36.0 3.55e-01 97.1% 64.1%
5018860 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.52 44.0 3.47e-01 100.0% 44.0%
3317821 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 46.0 4.58e-01 98.6% 98.7%
3243255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 42.0 4.12e-01 94.3% 84.0%
4022937 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 3.31e-01 100.0% 63.3%
3606829 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.50 44.0 3.17e-01 100.0% 33.7%