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OQ992562.1__WNV50050.1__X__00011

Bact-Vir

OQ992562.1__WNV50050.1__X__00011

Identity

Accession:
OQ992562 ↗
Kingdom:
phage

Quality

74.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-61
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 44.0 4.09e-01 72.4% 45.8%
2aj6A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.75 52.0 4.01e-01 79.3% 35.0%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 42.0 3.89e-01 70.7% 45.1%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 44.0 3.90e-01 77.6% 42.4%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.71 51.0 4.05e-01 75.9% 42.5%
3b02A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 47.0 4.21e-01 74.1% 48.2%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 48.0 4.65e-01 75.9% 70.1%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 39.0 3.62e-01 84.5% 45.2%
1u8vB03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.65 47.0 3.16e-01 75.9% 41.8%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.63 45.0 3.50e-01 75.9% 38.1%
3hwcA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.62 43.0 2.98e-01 74.1% 41.0%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 41.0 3.74e-01 72.4% 50.6%
2yyiA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 41.0 2.81e-01 70.7% 40.8%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.61 41.0 3.65e-01 81.0% 47.1%
2fpqA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.60 52.0 3.18e-01 100.0% 76.1%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.60 45.0 3.68e-01 81.0% 76.9%
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.73e-01 72.4% 79.0%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.54e-01 81.0% 43.6%
6k8hA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 45.0 3.23e-01 84.5% 37.1%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 39.0 3.38e-01 70.7% 92.6%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.58 48.0 2.99e-01 100.0% 66.5%
1dtoA01 1.10.287.30 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 0.57 41.0 3.44e-01 75.9% 90.2%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.57 46.0 4.29e-01 89.7% 95.8%
5ddtA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.57 43.0 2.88e-01 82.8% 72.4%
4fymF00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 41.0 2.80e-01 75.9% 22.5%
2jiiA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.56 49.0 3.43e-01 100.0% 50.0%
2v7fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.06e-01 79.3% 31.7%
3natA01 3.40.50.11250 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 0.56 48.0 3.66e-01 100.0% 93.9%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 39.0 3.52e-01 77.6% 60.7%
3mcwA00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.55 38.0 2.69e-01 72.4% 89.2%
2vqmA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.55 48.0 2.92e-01 100.0% 57.3%
6opmD01 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.55 46.0 3.16e-01 100.0% 59.7%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.55 45.0 3.58e-01 93.1% 62.0%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.54 44.0 3.76e-01 89.7% 69.5%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.51e-01 98.3% 46.8%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 47.0 3.63e-01 100.0% 90.6%
3iylB02 1.10.2050.10 Mainly Alpha › Orthogonal Bundle › Protein mu-1, chain B, domain 3 › Protein mu-1, chain B, domain 3 0.53 40.0 3.15e-01 84.5% 62.7%
6zhhA01 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.53 45.0 3.20e-01 96.6% 88.3%
3b73B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.33e-01 93.1% 51.7%
1e1hB01 1.20.58.540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 37.0 3.16e-01 77.6% 67.0%
7pbkB02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.52 39.0 3.03e-01 82.8% 41.5%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.36e-01 72.4% 94.4%
1xtfA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.52 44.0 2.66e-01 96.6% 44.5%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.14e-01 87.9% 79.1%
6qv3A05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.49e-01 86.2% 62.4%
3pvsA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.50 38.0 3.57e-01 86.2% 80.3%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 38.0 3.03e-01 84.5% 67.7%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 42.0 3.68e-01 94.8% 80.0%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5057164 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 55.0 4.56e-01 86.2% 43.0%
3607082 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.72 54.0 4.65e-01 100.0% 52.2%
4945921 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 41.0 3.90e-01 81.0% 50.0%
3579266 5055.1.1.11 extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel › Cation_ATPase_N 0.67 47.0 4.34e-01 74.1% 98.7%
3804069 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.67 45.0 3.85e-01 70.7% 67.4%
3347271 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.67 45.0 3.31e-01 70.7% 40.0%
3384077 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.67 45.0 3.91e-01 70.7% 73.3%
3837892 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 45.0 2.77e-01 70.7% 18.8%
4991791 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 42.0 3.60e-01 79.3% 40.0%
3308386 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.65 44.0 3.06e-01 70.7% 31.8%
3358714 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 2.63e-01 70.7% 16.0%
3822958 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.65 44.0 3.21e-01 72.4% 38.8%
3362615 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.64 44.0 3.26e-01 72.4% 42.7%
4013299 109.4.1.1304 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.64 43.0 2.55e-01 70.7% 13.2%
5055185 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.63 48.0 4.81e-01 84.5% 95.0%
3824428 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.63 43.0 3.35e-01 72.4% 49.2%
3903618 219.1.1.54 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C98 0.62 46.0 2.91e-01 79.3% 32.1%
4083434 5069.1.1.53 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › UPF0182 0.62 42.0 2.97e-01 70.7% 23.3%
4014086 109.4.1.777 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 42.0 2.70e-01 72.4% 33.1%
3828246 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.61 42.0 3.46e-01 72.4% 58.2%
3307139 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.61 43.0 3.34e-01 74.1% 53.8%
4011979 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 41.0 3.31e-01 72.4% 52.8%
3447913 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.60 43.0 3.49e-01 86.2% 40.0%
3777935 5054.1.1.59 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.60 45.0 2.85e-01 81.0% 24.1%
5077394 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.60 39.0 3.14e-01 91.4% 33.0%
4527970 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.60 53.0 3.64e-01 100.0% 67.5%
5023102 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.59 45.0 3.64e-01 82.8% 84.5%
4956415 101.1.2.18 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e 0.59 42.0 3.20e-01 79.3% 82.5%
3176868 129.1.1.102 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › PF30133 0.59 44.0 3.21e-01 81.0% 72.5%
3848684 2484.1.1.104 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 0.58 48.0 3.28e-01 100.0% 95.1%
4976469 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.58 46.0 2.95e-01 87.9% 61.4%
3357775 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.58 43.0 3.74e-01 82.8% 52.2%
4928633 101.1.2.18 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e 0.58 40.0 3.41e-01 75.9% 100.0%
5073726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 41.0 3.69e-01 77.6% 82.4%
3832037 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 40.0 2.61e-01 74.1% 55.7%
3939641 2484.1.1.104 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 0.57 45.0 3.11e-01 93.1% 62.1%
4986171 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.56 43.0 3.68e-01 79.3% 51.1%
4940788 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 46.0 4.14e-01 98.3% 88.9%
3626211 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.56e-01 84.5% 48.4%
3762687 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.56 42.0 2.54e-01 84.5% 17.2%
4365970 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.56 47.0 3.93e-01 98.3% 61.8%
4947701 101.1.2.882 alpha arrays › HTH › HTH › winged helix domain › FeoA 0.56 37.0 3.24e-01 70.7% 69.0%
3717906 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.56 46.0 3.26e-01 100.0% 70.7%
4586962 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.54 45.0 3.65e-01 98.3% 57.5%
3974773 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 44.0 3.79e-01 98.3% 65.7%
1511065 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.54 44.0 3.70e-01 94.8% 86.1%
4929718 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 36.0 3.06e-01 70.7% 62.9%
3283039 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.28e-01 98.3% 37.2%
4931792 306.3.1.6 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › DEAD_assoc 0.53 41.0 2.98e-01 91.4% 57.9%
5053927 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.53 47.0 3.52e-01 100.0% 65.0%
3382543 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 3.88e-01 98.3% 72.2%
3290858 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.49e-01 91.4% 82.9%
3702110 593.1.1.0 alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like 0.52 42.0 2.91e-01 100.0% 81.8%
3248683 5001.1.1.80 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Dicty_CAR 0.52 41.0 2.73e-01 94.8% 59.7%
4005987 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 39.0 3.03e-01 81.0% 67.2%
3320650 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.51 42.0 3.63e-01 96.6% 93.0%
4970959 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.66e-01 93.1% 70.0%
4998335 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 41.0 3.79e-01 96.6% 69.3%
4979986 102.1.2.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase 0.51 43.0 2.91e-01 100.0% 51.8%
3588933 5050.1.1.10 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 0.51 42.0 2.95e-01 100.0% 72.3%
4270095 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.51 38.0 3.59e-01 81.0% 74.3%
4927049 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.50 40.0 3.49e-01 100.0% 55.0%