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OQ992562.1__WNV50417.1__X__00378

Bact-Vir

OQ992562.1__WNV50417.1__X__00378

Identity

Accession:
OQ992562 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Phikzvirus› Pseudomonas_phage_PhiPizzaParty

TaxID: 3053654

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-79
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dbuB00 3.60.20.40 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit 0.51 38.0 2.89e-01 82.9% 74.2%
D2 high residues 93-175
PDB
Domain cluster: rep: OQ790161.1__WJJ55196.1__X__00319__D226-305
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6wimA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.76 56.0 5.86e-01 85.5% 86.5%
3og5A01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.73 57.0 5.74e-01 91.6% 82.4%
4k3cA01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.70 54.0 5.52e-01 89.2% 85.4%
4k3bA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.69 55.0 5.53e-01 89.2% 85.7%
3nuhB03 3.10.20.690 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.69 52.0 5.11e-01 91.6% 75.3%
6j09A04 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.69 52.0 5.40e-01 88.0% 88.3%
6j09A02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.67 51.0 5.25e-01 86.7% 88.5%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.65 53.0 3.83e-01 89.2% 36.8%
4k3bA04 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.65 49.0 5.09e-01 90.4% 88.5%
3hoiA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.59 50.0 3.95e-01 100.0% 81.3%
1sdoA00 3.40.91.20 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.58 49.0 3.85e-01 97.6% 91.1%
4gs5A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.58 44.0 4.12e-01 81.9% 82.9%
2r5rA00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.57 51.0 3.65e-01 98.8% 54.1%
3lm6A00 3.40.47.40 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Stage V sporulation protein AD 0.56 46.0 3.17e-01 96.4% 98.8%
4oo0B00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.55 48.0 3.66e-01 98.8% 96.6%
4uqfA02 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.55 46.0 3.99e-01 94.0% 88.1%
4fvmA02 3.30.70.2820 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 39.0 3.67e-01 98.8% 62.1%
1rjjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 38.0 3.53e-01 98.8% 57.7%
6kmoB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 43.0 2.93e-01 90.4% 72.6%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 37.0 3.81e-01 72.3% 84.6%
1guxB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.50 42.0 3.56e-01 92.8% 99.3%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3980756 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.79 72.0 6.61e-01 100.0% 81.0%
3393579 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.79 70.0 6.15e-01 96.4% 92.4%
3582958 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.78 70.0 6.13e-01 97.6% 93.3%
3087317 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.78 69.0 6.06e-01 96.4% 89.2%
3408830 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.77 68.0 6.19e-01 95.2% 96.3%
3949098 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.77 70.0 6.36e-01 100.0% 77.3%
3226972 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.77 69.0 6.10e-01 97.6% 92.4%
3601066 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.77 68.0 6.23e-01 95.2% 100.0%
3612359 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.76 67.0 6.03e-01 96.4% 93.9%
3087323 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.76 67.0 5.84e-01 96.4% 88.0%
3599088 864.1.1.0 ↗ a+b two layers › DLC › DLC › DLC 0.76 67.0 5.91e-01 96.4% 90.7%
3484769 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.75 66.0 5.88e-01 96.4% 89.9%
3232521 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.75 62.0 5.81e-01 89.2% 100.0%
4027054 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.75 64.0 6.04e-01 94.0% 100.0%
3954468 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.74 66.0 5.06e-01 100.0% 71.6%
1518918 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.74 66.0 5.96e-01 100.0% 75.9%
1145979 3121.1.1.4 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_TamA_1 0.72 58.0 5.92e-01 89.2% 88.9%
4348096 3675.1.1.1 ↗ a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.71 55.0 4.41e-01 91.6% 41.8%
3917458 864.1.1.0 ↗ a+b two layers › DLC › DLC › DLC 0.70 61.0 5.99e-01 94.0% 96.7%
3839154 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.69 55.0 5.49e-01 91.6% 83.5%
3166208 3121.1.1.4 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_TamA_1 0.68 54.0 5.47e-01 89.2% 88.7%
3923121 864.1.1.3 ↗ a+b two layers › DLC › DLC › DLC › Ground-like 0.68 55.0 5.58e-01 86.7% 97.5%
4971706 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.68 58.0 4.50e-01 95.2% 62.7%
3387643 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.67 53.0 5.40e-01 88.0% 90.0%
3484483 864.1.1.1 ↗ a+b two layers › DLC › DLC › DLC › Dynein_light 0.66 53.0 5.02e-01 88.0% 86.0%
4115098 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.64 50.0 5.06e-01 88.0% 84.7%
3707211 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.64 48.0 5.14e-01 98.8% 92.9%
2486950 7052.1.1.1 ↗ a+b two layers › N-terminal domain of PprA › N-terminal domain of PprA › N-terminal domain of PprA › PF29825 0.60 46.0 4.36e-01 83.1% 85.4%
3271185 304.12.1.5 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MBTP1_N 0.60 46.0 4.47e-01 88.0% 73.7%
3167302 101.1.2.86 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.57 44.0 4.30e-01 85.5% 91.6%
3244904 210.2.1.1 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.56 50.0 3.75e-01 100.0% 53.3%
3620856 873.1.1.5 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.56 46.0 3.50e-01 91.6% 49.0%
4012767 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 47.0 3.14e-01 96.4% 92.8%
4002047 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.54 45.0 2.96e-01 91.6% 75.6%
4601946 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.53 42.0 2.93e-01 86.7% 64.6%
5052927 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.56e-01 86.7% 71.9%
3728856 171.1.1.9 ↗ alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, Ribonucleas_3_3 0.52 41.0 3.03e-01 86.7% 80.9%
4029363 304.20.1.2 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 0.52 40.0 3.35e-01 91.6% 45.6%