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OQ995431.1__WMI33766.1__SEA_PATELGO_154__00130

Bact-Vir

OQ995431.1__WMI33766.1__SEA_PATELGO_154__00130

Identity

Accession:
OQ995431 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stanwilliamsviridae› Gilsonvirus› Streptomyces_phage_Patelgo

TaxID: 3043925

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-55
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 79.0 7.44e-01 100.0% 87.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.83 69.0 6.81e-01 100.0% 84.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.81 66.0 6.66e-01 100.0% 89.6%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 66.0 5.75e-01 100.0% 60.3%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 65.0 5.92e-01 100.0% 68.8%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 69.0 7.07e-01 98.0% 100.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 63.0 6.07e-01 100.0% 80.4%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 68.0 6.40e-01 100.0% 91.5%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 63.0 6.14e-01 100.0% 85.2%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.69 62.0 4.93e-01 100.0% 58.9%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 62.0 5.57e-01 100.0% 77.3%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 5.42e-01 100.0% 86.5%
4dupA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.68 56.0 3.89e-01 100.0% 53.5%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 58.0 4.89e-01 100.0% 66.7%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.66 57.0 5.35e-01 100.0% 80.0%
2wssA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 47.0 3.90e-01 100.0% 41.9%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 4.80e-01 100.0% 64.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.64 55.0 5.03e-01 100.0% 72.7%
2vd5B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 52.0 3.42e-01 87.8% 55.1%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.95e-01 100.0% 83.3%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 4.60e-01 100.0% 59.0%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 49.0 4.55e-01 89.8% 93.7%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 45.0 3.73e-01 100.0% 43.3%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.60 46.0 3.94e-01 98.0% 50.6%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 48.0 4.33e-01 89.8% 90.0%
2kxgA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 49.0 4.04e-01 95.9% 72.6%
3zleA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.59 38.0 4.03e-01 75.5% 79.5%
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.57 48.0 3.85e-01 100.0% 69.8%
2p5zX04 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.57 44.0 4.07e-01 85.7% 96.9%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 44.0 4.24e-01 100.0% 85.7%
4o8sA01 3.10.450.620 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain 0.55 42.0 3.19e-01 85.7% 40.8%
2dyiA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.55 46.0 4.15e-01 100.0% 83.1%
2v6eA03 1.10.443.30 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase 0.55 43.0 2.88e-01 91.8% 52.9%
3jukA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 40.0 2.65e-01 87.8% 34.3%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.54 43.0 3.72e-01 91.8% 98.8%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 46.0 3.27e-01 93.9% 77.5%
4bh5A00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.53 40.0 3.11e-01 89.8% 51.5%
1x4zA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.28e-01 85.7% 71.0%
3lltA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 3.50e-01 98.0% 86.0%
6gitA02 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.52 40.0 2.47e-01 89.8% 96.5%
1uyjA01 3.30.360.60 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › 0.52 41.0 3.55e-01 91.8% 75.6%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.51 43.0 3.73e-01 100.0% 60.2%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3715776 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.90 66.0 5.91e-01 100.0% 58.5%
4963650 4.1.1.488 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7346 0.89 68.0 6.51e-01 100.0% 72.7%
3907619 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.86 72.0 5.84e-01 100.0% 51.8%
3839849 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.85 63.0 5.74e-01 100.0% 60.0%
3407089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 68.0 5.72e-01 100.0% 55.0%
3931905 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 74.0 5.45e-01 100.0% 41.7%
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.81 71.0 6.85e-01 100.0% 85.2%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 69.0 5.71e-01 100.0% 96.5%
4024240 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 71.0 5.88e-01 100.0% 66.3%
3482559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 70.0 4.72e-01 100.0% 53.5%
3473407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 70.0 5.99e-01 100.0% 77.3%
3302391 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.76 69.0 4.87e-01 100.0% 50.7%
None — 0.76 69.0 3.97e-01 100.0% 17.7%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 62.0 6.01e-01 100.0% 80.0%
3627576 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 69.0 6.25e-01 100.0% 90.8%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 68.0 4.24e-01 100.0% 20.9%
3584555 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.76 70.0 6.08e-01 100.0% 84.3%
3233461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 70.0 6.50e-01 100.0% 91.7%
3300226 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.75 68.0 5.73e-01 100.0% 88.7%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 5.60e-01 100.0% 60.0%
3373583 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 68.0 6.00e-01 100.0% 81.4%
3376597 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 60.0 6.24e-01 87.8% 100.0%
3669494 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 67.0 4.63e-01 100.0% 38.7%
3308545 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 61.0 4.20e-01 91.8% 30.6%
3914746 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.73 62.0 5.47e-01 100.0% 65.7%
4032729 4.1.1.168 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2187 0.73 64.0 6.03e-01 100.0% 82.8%
4398865 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 65.0 5.18e-01 100.0% 83.2%
3693741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 65.0 5.78e-01 100.0% 89.9%
3617111 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 58.0 4.77e-01 100.0% 48.9%
3595169 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 65.0 5.71e-01 100.0% 84.3%
4994957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 57.0 5.51e-01 100.0% 80.0%
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.46e-01 100.0% 75.0%
3936468 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 62.0 4.92e-01 100.0% 49.0%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 64.0 4.95e-01 100.0% 51.0%
3749631 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.70 54.0 4.22e-01 91.8% 40.0%
4995678 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.69e-01 100.0% 85.5%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 62.0 4.92e-01 100.0% 54.7%
3948255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 4.35e-01 100.0% 36.9%
4468803 236.1.1.1 ↗ beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.68 59.0 4.52e-01 100.0% 79.1%
3947337 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.68 53.0 3.76e-01 100.0% 27.7%
3918299 4.1.1.376 ↗ beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.68 58.0 5.25e-01 100.0% 75.7%
4251101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 4.93e-01 100.0% 69.4%
3592075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 59.0 4.93e-01 100.0% 74.1%
4193599 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 59.0 4.59e-01 100.0% 57.1%
4976896 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 58.0 4.70e-01 100.0% 53.7%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 59.0 5.09e-01 100.0% 80.0%
4220355 2003.1.3.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO, Pyr_redox_2 0.66 57.0 3.63e-01 100.0% 62.4%
4962071 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.66 57.0 3.38e-01 100.0% 51.6%
4345080 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 58.0 5.30e-01 100.0% 78.5%
3229356 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.13e-01 100.0% 64.8%
4101535 331.3.1.10 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL 0.58 49.0 3.60e-01 100.0% 68.3%
3402051 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.56 47.0 4.10e-01 98.0% 62.8%
3485638 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 43.0 3.24e-01 89.8% 64.3%
4032028 325.1.6.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.54 41.0 2.96e-01 93.9% 97.2%
3424264 5.1.8.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.53 44.0 3.16e-01 98.0% 66.3%
3968533 325.1.6.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.52 37.0 2.79e-01 81.6% 78.0%
3587091 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 39.0 3.08e-01 89.8% 61.7%
3693957 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.51 40.0 2.84e-01 100.0% 38.5%
3935844 5.1.3.204 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7911 0.50 41.0 2.56e-01 95.9% 27.1%