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OQ999172.1__WJZ23479.1__LIS04_51__00051
Bact-VirOQ999172.1__WJZ23479.1__LIS04_51__00051
Identity
- Accession:
- OQ999172 ↗
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Taxonomy
TaxID: 3058626
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-55
Domain cluster:
representative
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033962 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.64 | 45.0 | 3.14e-01 | 77.8% | 32.4% |
| 4102539 | 103.5.1.4 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › HCS_D2 | 0.61 | 48.0 | 3.72e-01 | 86.7% | 59.0% |
D2
medium
residues 56-141
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3on3B00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.57 | 45.0 | 3.59e-01 | 90.7% | 41.7% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 35.0 | 4.18e-01 | 90.7% | 96.4% |
| 1cpcA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.56 | 49.0 | 4.04e-01 | 100.0% | 68.5% |
| 1b65A00 | 3.60.70.12 | Alpha Beta › 4-Layer Sandwich › L-amino peptidase D-ALA esterase/amidase › L-amino peptidase D-ALA esterase/amidase | 0.56 | 45.0 | 3.04e-01 | 90.7% | 94.8% |
| 1ux5A03 | 1.20.58.2220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain | 0.56 | 43.0 | 3.11e-01 | 82.6% | 76.6% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 35.0 | 3.97e-01 | 90.7% | 85.3% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.51 | 38.0 | 3.46e-01 | 96.5% | 59.3% |
| 3sngA00 | 1.10.575.10 | Mainly Alpha › Orthogonal Bundle › P1 Nuclease › P1 Nuclease | 0.51 | 44.0 | 3.17e-01 | 98.8% | 53.2% |
| 3gfaA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.50 | 44.0 | 3.43e-01 | 98.8% | 83.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995714 | 2004.1.1.1077 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27249 | 0.97 | 88.0 | 6.07e-01 | 95.3% | 33.8% |
| 4215479 | 7574.1.1.4 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › POR_N | 0.61 | 33.0 | 2.37e-01 | 76.7% | 17.3% |
| 3314172 | 609.1.1.1 ↗ | alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › PARP_reg | 0.57 | 43.0 | 3.63e-01 | 82.6% | 91.6% |
| 4939027 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 43.0 | 3.85e-01 | 94.2% | 60.0% |
| 3606235 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.55 | 41.0 | 3.28e-01 | 79.1% | 70.0% |
| 3474500 | 632.7.1.25 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › PF27508 | 0.50 | 35.0 | 3.60e-01 | 97.7% | 74.1% |
D3
medium
residues 142-217
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cjyB02 | 3.40.1090.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain | 0.57 | 47.0 | 2.95e-01 | 97.4% | 93.4% |
| 4nvsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 44.0 | 3.51e-01 | 86.8% | 96.8% |
| 1nlfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.20e-01 | 92.1% | 72.8% |
| 4p4mA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 41.0 | 3.66e-01 | 82.9% | 69.6% |
| 3ih5A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 43.0 | 3.22e-01 | 89.5% | 94.1% |
| 1gkuB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.23e-01 | 92.1% | 54.5% |
| 5mypA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.53 | 43.0 | 3.27e-01 | 93.4% | 79.8% |
| 2awnD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 42.0 | 3.49e-01 | 89.5% | 71.7% |
| 5kmpB00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.53 | 44.0 | 2.78e-01 | 92.1% | 25.6% |
| 2g95B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 43.0 | 3.04e-01 | 92.1% | 45.8% |
| 3e9eB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.53 | 43.0 | 3.18e-01 | 97.4% | 79.5% |
| 2bfwA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 44.0 | 3.38e-01 | 97.4% | 98.4% |
| 1vjtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 3.74e-01 | 92.1% | 68.1% |
| 3jruA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 41.0 | 3.30e-01 | 90.8% | 83.4% |
| 3f8tA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 42.0 | 2.95e-01 | 97.4% | 68.9% |
| 3m6aA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.34e-01 | 90.8% | 72.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995714 | 2004.1.1.1077 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27249 | 0.83 | 73.0 | 5.01e-01 | 94.7% | 32.1% |
| 4988088 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.65 | 55.0 | 3.86e-01 | 92.1% | 40.4% |
| 4879892 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.57 | 45.0 | 3.33e-01 | 89.5% | 57.6% |
| 5015090 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.56 | 48.0 | 3.28e-01 | 100.0% | 97.1% |
| 3359748 | 2007.2.3.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Syja_N | 0.56 | 47.0 | 3.59e-01 | 98.7% | 86.5% |
| 3187939 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.55 | 48.0 | 3.28e-01 | 100.0% | 43.2% |
| 4958444 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.54 | 43.0 | 3.28e-01 | 90.8% | 87.5% |
| 4888758 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.53 | 42.0 | 3.04e-01 | 88.2% | 59.2% |
| 5038910 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.52 | 40.0 | 2.87e-01 | 88.2% | 100.0% |
| 3972249 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 41.0 | 3.17e-01 | 90.8% | 68.4% |
| 5023501 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.51 | 40.0 | 2.90e-01 | 89.5% | 64.6% |
| 1196959 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 32.0 | 3.37e-01 | 86.8% | 71.0% |
| 4228284 | 2004.1.1.44 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK | 0.51 | 41.0 | 2.81e-01 | 92.1% | 51.4% |
| 4661054 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.51 | 39.0 | 2.46e-01 | 88.2% | 93.3% |
| 4940787 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.50 | 42.0 | 3.03e-01 | 97.4% | 62.0% |