←Back to structures
OQ999401.1__WJZ48450.1__X__00034
Bact-VirOQ999401.1__WJZ48450.1__X__00034
Identity
- Accession:
- OQ999401 ↗
- Kingdom:
- phage
Quality
83.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-74
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.87 | 35.0 | 4.44e-01 | 86.3% | 62.2% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.67 | 32.0 | 3.60e-01 | 94.5% | 56.1% |
| 1mpgA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.67 | 33.0 | 2.89e-01 | 86.3% | 29.5% |
| 4kbmB01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 36.0 | 4.11e-01 | 94.5% | 70.9% |
| 3t7lA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 40.0 | 4.05e-01 | 94.5% | 63.5% |
| 2n88A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 34.0 | 3.71e-01 | 97.3% | 70.7% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.58 | 43.0 | 3.79e-01 | 79.5% | 84.4% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 35.0 | 3.55e-01 | 98.6% | 62.7% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.53 | 41.0 | 3.27e-01 | 86.3% | 88.0% |
| 5os9A00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.51 | 43.0 | 3.83e-01 | 100.0% | 96.5% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 39.0 | 3.26e-01 | 100.0% | 47.6% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 44.0 | 3.89e-01 | 95.9% | 78.3% |
| 1ng2A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 30.0 | 3.60e-01 | 86.3% | 100.0% |
| 4it7A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 38.0 | 3.45e-01 | 83.6% | 94.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3659202 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.77 | 40.0 | 3.92e-01 | 93.2% | 46.3% |
| 4966836 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 39.0 | 4.42e-01 | 95.9% | 65.5% |
| 3544618 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.75 | 44.0 | 4.16e-01 | 97.3% | 50.6% |
| 3801752 | 375.1.1.269 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29332 | 0.65 | 35.0 | 4.19e-01 | 98.6% | 78.0% |
| 223688 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 31.0 | 3.77e-01 | 90.4% | 73.3% |
| 4851967 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.62 | 37.0 | 3.93e-01 | 93.2% | 69.4% |
| 3782443 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 47.0 | 3.63e-01 | 94.5% | 37.6% |
| 4000496 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.59 | 45.0 | 3.24e-01 | 89.0% | 29.5% |
| 5056928 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.57 | 48.0 | 3.73e-01 | 95.9% | 87.6% |
| 3348338 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.54 | 33.0 | 3.53e-01 | 84.9% | 71.4% |
| 4034310 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.52 | 45.0 | 3.34e-01 | 100.0% | 55.1% |
| 3374414 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.52 | 45.0 | 4.07e-01 | 100.0% | 99.0% |
| 3900505 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.51 | 39.0 | 3.40e-01 | 84.9% | 87.4% |
| 3445327 | 708.1.1.8 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FAR1 | 0.51 | 34.0 | 2.94e-01 | 82.2% | 41.7% |
| 3396138 | 383.1.2.0 ↗ | few secondary structure elements › Defensin-like › Defensin-related › Laterosporulin | 0.51 | 34.0 | 3.66e-01 | 95.9% | 85.0% |