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OQ999401.1__WJZ48499.1__X__00083

Bact-Vir

OQ999401.1__WJZ48499.1__X__00083

Identity

Accession:
OQ999401 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Actinomycetia_phage_DSL-LC01

TaxID: 3058956

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-96
PDB
Domain cluster: rep: KT895374.1__ALN97800.1__Bp8pS_121__00121__D48-101
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.81 67.0 6.98e-01 92.0% 97.8%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.76 63.0 5.21e-01 92.0% 55.7%
4b8vA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.75 68.0 6.14e-01 100.0% 74.6%
4b8vA02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.74 65.0 5.79e-01 100.0% 71.2%
4b8vA03 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.74 60.0 6.08e-01 94.0% 93.9%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.72 56.0 5.66e-01 92.0% 88.0%
3sluB01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 56.0 4.62e-01 94.0% 54.9%
2djpA00 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.66 53.0 4.69e-01 96.0% 61.0%
1o5wB03 1.10.405.10 Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 0.64 51.0 4.42e-01 100.0% 92.4%
5mmiJ02 1.10.10.250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain 0.64 46.0 4.17e-01 78.0% 98.6%
2yg5A03 1.10.405.10 Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 0.59 47.0 4.08e-01 100.0% 92.5%
3pkiA01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.58 42.0 2.90e-01 82.0% 92.6%
4iiwA01 3.30.1490.480 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Endolytic murein transglycosylase 0.56 42.0 3.85e-01 92.0% 65.8%
5mrwB01 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.53 38.0 2.85e-01 78.0% 60.3%
2r1iA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 39.0 2.98e-01 88.0% 46.9%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3240632 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.85 66.0 6.92e-01 92.0% 93.3%
3422876 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.81 68.0 6.41e-01 92.0% 83.3%
4118675 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 65.0 6.80e-01 92.0% 97.8%
3963519 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.80 68.0 6.22e-01 94.0% 78.5%
3838194 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 64.0 6.76e-01 92.0% 97.8%
3974521 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 66.0 6.16e-01 94.0% 75.0%
3969916 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.79 67.0 5.91e-01 96.0% 65.7%
4249176 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.78 67.0 6.27e-01 96.0% 76.7%
4176074 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.78 68.0 6.40e-01 98.0% 91.7%
3165071 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.78 66.0 6.39e-01 96.0% 83.6%
4448562 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.78 64.0 6.21e-01 94.0% 81.8%
3240624 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.77 64.0 6.22e-01 92.0% 81.8%
4157099 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.77 62.0 6.34e-01 90.0% 91.7%
3970261 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.76 64.0 6.33e-01 96.0% 94.4%
4277578 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.76 62.0 6.28e-01 92.0% 90.0%
1649977 101.15.1.2 ↗ alpha arrays › HTH › LysM domain › LysM domain › OapA 0.76 63.0 5.18e-01 92.0% 54.4%
2124476 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.75 68.0 4.90e-01 100.0% 37.0%
3636417 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.75 64.0 6.32e-01 94.0% 90.6%
3636424 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.75 63.0 6.08e-01 92.0% 85.5%
2047861 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.74 65.0 6.24e-01 100.0% 84.5%
3303205 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.74 66.0 6.18e-01 98.0% 83.3%
3355077 101.15.1.13 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK 0.74 64.0 6.22e-01 96.0% 87.3%
3165082 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.74 62.0 6.25e-01 96.0% 94.0%
3185732 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.73 61.0 5.95e-01 92.0% 92.7%
3186012 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.73 62.0 5.83e-01 94.0% 81.7%
3985839 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.73 64.0 5.65e-01 96.0% 80.0%
3191020 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.73 61.0 5.72e-01 92.0% 81.7%
3189252 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.73 59.0 5.49e-01 92.0% 70.8%
4015813 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.73 60.0 5.65e-01 92.0% 76.7%
3675929 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.73 60.0 5.86e-01 94.0% 81.8%
3452845 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.72 65.0 6.28e-01 100.0% 92.7%
3248434 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.72 59.0 5.97e-01 92.0% 95.9%
2124917 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.72 64.0 4.45e-01 100.0% 32.3%
3517460 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.71 59.0 5.80e-01 96.0% 85.5%
4069716 101.15.1.14 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 0.71 61.0 4.56e-01 96.0% 40.0%
3925474 101.15.1.1 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM 0.70 58.0 5.88e-01 96.0% 94.0%
3457321 101.15.1.0 ↗ alpha arrays › HTH › LysM domain › LysM domain 0.70 54.0 5.59e-01 90.0% 93.3%
3821115 101.15.1.5 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 0.70 62.0 5.19e-01 100.0% 60.0%
3968266 3536.1.1.0 ↗ a+b complex topology › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains 0.61 52.0 4.21e-01 100.0% 58.1%
4064277 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.60 42.0 4.04e-01 80.0% 75.4%
2093102 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.59 47.0 3.97e-01 94.0% 93.6%