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OQ999401.1__WJZ48515.1__X__00099
Bact-VirOQ999401.1__WJZ48515.1__X__00099
Identity
- Accession:
- OQ999401 ↗
- Kingdom:
- phage
Quality
64.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-111
D2
medium
residues 112-183
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.70 | 56.0 | 5.14e-01 | 87.5% | 71.6% |
| 5z5mA01 | 1.10.3330.10 | Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | 0.70 | 47.0 | 3.68e-01 | 83.3% | 33.6% |
| 1oe8A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 45.0 | 3.74e-01 | 70.8% | 85.5% |
| 7dkaA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 51.0 | 3.71e-01 | 86.1% | 63.1% |
| 2yy5A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.63 | 53.0 | 4.58e-01 | 100.0% | 58.0% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 55.0 | 4.71e-01 | 100.0% | 80.5% |
| 1xl7A01 | 1.10.275.20 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Choline/Carnitine o-acyltransferase | 0.61 | 46.0 | 4.12e-01 | 81.9% | 85.4% |
| 1r4wA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 49.0 | 3.60e-01 | 90.3% | 35.6% |
| 4xpwA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.59 | 50.0 | 4.24e-01 | 100.0% | 64.1% |
| 2di3B02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.59 | 50.0 | 4.03e-01 | 100.0% | 77.4% |
| 1tqgA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.58 | 49.0 | 4.46e-01 | 100.0% | 69.5% |
| 1b4cA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.58 | 49.0 | 4.59e-01 | 100.0% | 76.1% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.57 | 43.0 | 3.85e-01 | 84.7% | 66.4% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 43.0 | 4.28e-01 | 98.6% | 77.9% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.57 | 41.0 | 3.53e-01 | 77.8% | 72.6% |
| 2g8yA01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.56 | 39.0 | 3.50e-01 | 81.9% | 47.8% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 38.0 | 3.83e-01 | 73.6% | 70.8% |
| 8igrI01 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.56 | 43.0 | 3.29e-01 | 84.7% | 90.9% |
| 2zueA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.54 | 46.0 | 3.91e-01 | 94.4% | 78.2% |
| 5fhiA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 37.0 | 3.02e-01 | 75.0% | 63.3% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.52 | 36.0 | 3.68e-01 | 81.9% | 75.7% |
| 6jpaE00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.51 | 43.0 | 3.38e-01 | 100.0% | 63.3% |
| 3mpiA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.50 | 39.0 | 3.39e-01 | 87.5% | 79.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1883676 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.70 | 52.0 | 3.77e-01 | 79.2% | 47.2% |
| 4949602 | 601.7.1.34 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › DUF4129 | 0.68 | 53.0 | 4.86e-01 | 84.7% | 86.3% |
| 2842227 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.65 | 50.0 | 4.51e-01 | 81.9% | 63.3% |
| 5042877 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.65 | 41.0 | 4.60e-01 | 73.6% | 92.0% |
| 2968810 | 2485.1.1.10 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA | 0.65 | 51.0 | 3.65e-01 | 86.1% | 58.0% |
| 4934213 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.64 | 47.0 | 3.91e-01 | 79.2% | 92.3% |
| 4114337 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.62 | 54.0 | 5.37e-01 | 100.0% | 93.3% |
| 4484278 | 601.7.1.48 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › PF29375 | 0.61 | 52.0 | 4.43e-01 | 95.8% | 94.2% |
| 4613289 | 109.4.1.1301 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RAI16-like, KELAA, DUF5917 | 0.61 | 42.0 | 2.48e-01 | 72.2% | 17.5% |
| 3601219 | 3447.1.1.9 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ERG4_ERG24, DUF1295 | 0.61 | 43.0 | 3.12e-01 | 73.6% | 61.5% |
| 5053257 | 601.28.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › VPS28 | 0.59 | 53.0 | 4.83e-01 | 100.0% | 78.9% |
| 4465007 | 3004.1.1.5 ↗ | alpha bundles › Hypothetical protein YfhH, N-terminal domain › Hypothetical protein YfhH, N-terminal domain › Hypothetical protein YfhH, N-terminal domain › FCD | 0.59 | 43.0 | 4.33e-01 | 77.8% | 86.7% |
| 3927235 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.58 | 48.0 | 4.94e-01 | 97.2% | 100.0% |
| 3709759 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.57 | 48.0 | 4.53e-01 | 95.8% | 80.0% |
| 3180172 | 210.1.2.8 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › TANGO2 | 0.57 | 45.0 | 2.88e-01 | 86.1% | 79.4% |
| 3465555 | 3615.1.1.24 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › CDK5RAP3 | 0.56 | 49.0 | 3.79e-01 | 98.6% | 47.1% |
| 3282303 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.55 | 44.0 | 3.07e-01 | 88.9% | 38.4% |
| 4954907 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.55 | 47.0 | 4.49e-01 | 100.0% | 91.8% |
| 4975992 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.55 | 46.0 | 4.31e-01 | 100.0% | 91.6% |
| 1731087 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.54 | 35.0 | 3.55e-01 | 76.4% | 64.4% |
| 3598498 | 3788.1.1.0 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) | 0.53 | 42.0 | 3.79e-01 | 90.3% | 92.4% |
| 4135417 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 41.0 | 3.08e-01 | 88.9% | 77.6% |
| 5041255 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.52 | 43.0 | 3.93e-01 | 100.0% | 68.6% |
| 3226183 | 633.23.1.14 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 | 0.51 | 44.0 | 3.43e-01 | 100.0% | 58.9% |
| 3519127 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.50 | 38.0 | 3.68e-01 | 87.5% | 72.5% |