←Back to structures
OR003938.1__WJZ47991.1__X__00153
Bact-VirOR003938.1__WJZ47991.1__X__00153
Identity
- Accession:
- OR003938 ↗
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_DSL-LC03
TaxID: 3058961
Cluster
View cluster (51 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-97
Domain cluster:
rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.93 | 73.0 | 8.11e-01 | 92.5% | 100.0% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 52.0 | 6.14e-01 | 79.6% | 87.7% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 52.0 | 6.04e-01 | 80.6% | 88.2% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 50.0 | 5.75e-01 | 81.7% | 83.8% |
| 2vc8A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 50.0 | 5.69e-01 | 80.6% | 81.9% |
| 4m78N00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 47.0 | 5.39e-01 | 80.6% | 77.5% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 50.0 | 5.61e-01 | 80.6% | 82.2% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 47.0 | 5.30e-01 | 78.5% | 78.9% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 48.0 | 5.34e-01 | 83.9% | 78.4% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 57.0 | 5.02e-01 | 88.2% | 56.2% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 47.0 | 5.74e-01 | 78.5% | 98.3% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 48.0 | 5.09e-01 | 81.7% | 74.4% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 47.0 | 5.34e-01 | 80.6% | 84.5% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 44.0 | 5.49e-01 | 82.8% | 96.6% |
| 4c92F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 50.0 | 5.46e-01 | 81.7% | 84.4% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 48.0 | 5.21e-01 | 80.6% | 82.1% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.69 | 45.0 | 4.86e-01 | 94.6% | 80.5% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 47.0 | 5.05e-01 | 79.6% | 83.5% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 47.0 | 5.06e-01 | 90.3% | 90.1% |
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 54.0 | 5.01e-01 | 100.0% | 94.8% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 47.0 | 4.14e-01 | 92.5% | 68.9% |
| 3cp3A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 38.0 | 3.45e-01 | 75.3% | 82.7% |
| 2jobA00 | 3.30.160.320 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 3.59e-01 | 100.0% | 66.7% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 46.0 | 3.97e-01 | 100.0% | 93.4% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 43.0 | 3.77e-01 | 96.8% | 63.0% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 42.0 | 3.48e-01 | 94.6% | 86.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4813032 | 4.1.1.328 ↗ | beta barrels › SH3 › SH3 › SH3 › Sm_like | 0.92 | 75.0 | 8.09e-01 | 95.7% | 98.7% |
| 3999729 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.75 | 50.0 | 5.11e-01 | 81.7% | 70.8% |
| 3189264 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 56.0 | 5.45e-01 | 88.2% | 74.0% |
| 4024322 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 48.0 | 5.28e-01 | 80.6% | 84.0% |
| 4030048 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.72 | 56.0 | 5.36e-01 | 91.4% | 72.4% |
| 3341533 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.71 | 54.0 | 5.36e-01 | 80.6% | 76.8% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 47.0 | 4.40e-01 | 82.8% | 57.3% |
| 4938115 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 46.0 | 5.12e-01 | 79.6% | 83.8% |
| 3168781 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 50.0 | 4.81e-01 | 82.8% | 65.7% |
| 3725354 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 58.0 | 4.87e-01 | 88.2% | 61.3% |
| 3665119 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.69 | 48.0 | 5.11e-01 | 78.5% | 82.5% |
| 3593085 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 56.0 | 5.44e-01 | 88.2% | 79.6% |
| 3730294 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.67 | 48.0 | 5.12e-01 | 81.7% | 85.0% |
| 3482844 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 51.0 | 5.34e-01 | 90.3% | 87.1% |
| 3455165 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 50.0 | 4.97e-01 | 80.6% | 76.8% |
| 4013487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 4.49e-01 | 78.5% | 63.6% |
| 3699736 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 50.0 | 5.00e-01 | 79.6% | 78.7% |
| 4387111 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.65 | 46.0 | 4.96e-01 | 80.6% | 85.0% |
| 3788817 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.63 | 47.0 | 4.96e-01 | 79.6% | 84.7% |
| 3555586 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.63 | 48.0 | 4.80e-01 | 81.7% | 77.9% |
| 3509763 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.61 | 49.0 | 4.12e-01 | 84.9% | 68.0% |
| 4017204 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.61 | 50.0 | 4.87e-01 | 86.0% | 85.0% |
| 5050188 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.67e-01 | 82.8% | 81.1% |
| 4323235 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.57 | 45.0 | 4.23e-01 | 82.8% | 73.6% |
| 3707345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 41.0 | 4.17e-01 | 77.4% | 95.6% |
| 5029487 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.52 | 39.0 | 3.02e-01 | 78.5% | 81.0% |
| 3412051 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.52 | 36.0 | 2.63e-01 | 72.0% | 43.9% |
| 3258675 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.52 | 47.0 | 4.09e-01 | 100.0% | 65.7% |
| 4016094 | 206.1.3.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4 | 0.51 | 42.0 | 3.12e-01 | 94.6% | 97.4% |
| 3536447 | 4026.1.1.1 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer | 0.50 | 44.0 | 3.82e-01 | 100.0% | 62.8% |
| 3964955 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.50 | 36.0 | 3.06e-01 | 76.3% | 96.2% |