Back to structures

OR003939.1__WJZ48073.1__X__00025

Bact-Vir

OR003939.1__WJZ48073.1__X__00025

Identity

Accession:
OR003939 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Taxonomy

TaxID: 3058958

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-87
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cnqA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.73 43.0 3.59e-01 100.0% 33.6%
1k82A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.66 50.0 4.37e-01 81.5% 65.9%
1wh2A01 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.59 39.0 4.26e-01 79.0% 88.5%
3ckjA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 44.0 3.04e-01 92.6% 65.3%
1hr6B02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.53 38.0 2.82e-01 75.3% 84.1%
4f4oC03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 42.0 4.12e-01 88.9% 93.3%
2q0oA01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.51 43.0 3.53e-01 100.0% 76.2%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5061831 375.1.1.325 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › OapC 0.61 40.0 4.49e-01 93.8% 90.0%