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OR032571.1__WJZ48205.1__X__00015

Bact-Vir

OR032571.1__WJZ48205.1__X__00015

Identity

Accession:
OR032571 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Synechococcus_phage_DSL-LC02

TaxID: 3058947

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-81
PDB
Domain cluster: rep: NC_070964.1__YP_010670431.1__PQC14_gp121__00103__D3-79
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.74 57.0 4.62e-01 80.0% 53.6%
2hpuA02 3.30.70.2050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 44.0 4.86e-01 100.0% 81.0%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.67 50.0 4.67e-01 78.8% 82.0%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.63 43.0 3.38e-01 70.0% 53.2%
1wvqA00 3.40.1520.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like 0.63 48.0 3.87e-01 83.7% 46.6%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.62 54.0 4.32e-01 100.0% 94.0%
1va9A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 44.0 3.90e-01 78.8% 50.0%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.61 46.0 4.13e-01 81.2% 65.8%
6x3aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 44.0 4.09e-01 78.8% 67.3%
1rlhA02 3.40.1520.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like 0.59 45.0 4.20e-01 83.7% 72.3%
1tljB00 3.30.1960.10 Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like 0.59 44.0 3.36e-01 80.0% 54.8%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.58 50.0 4.83e-01 100.0% 96.7%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.58 49.0 4.77e-01 100.0% 94.7%
4bwiB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.58 40.0 3.14e-01 72.5% 62.2%
1t3yA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.58 47.0 4.04e-01 90.0% 61.1%
2arzA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 45.0 3.68e-01 85.0% 78.7%
7y8sA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 41.0 3.92e-01 80.0% 64.2%
4zpxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 50.0 3.63e-01 100.0% 53.6%
2vfkA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.56 42.0 3.12e-01 80.0% 96.6%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.56 39.0 3.62e-01 78.8% 55.7%
3vpbB03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 42.0 3.72e-01 78.8% 69.6%
1vq8B03 3.30.1430.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › 0.56 41.0 3.73e-01 78.8% 78.4%
1vzyA01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.55 45.0 3.29e-01 91.3% 83.3%
1y9kA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 45.0 4.07e-01 93.8% 97.3%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.54 42.0 3.39e-01 86.3% 62.2%
6cc0A01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.54 37.0 3.06e-01 72.5% 47.6%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 46.0 4.62e-01 93.8% 95.1%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 43.0 4.18e-01 93.8% 100.0%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 38.0 3.90e-01 93.8% 82.9%
2pw9C03 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.52 45.0 3.84e-01 100.0% 74.6%
3fncB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 44.0 3.61e-01 100.0% 84.5%
3jamD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.51 42.0 3.69e-01 95.0% 72.2%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 41.0 3.55e-01 87.5% 96.7%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.50 37.0 3.04e-01 80.0% 78.5%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3285401 3986.2.1.0 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.81 57.0 5.86e-01 80.0% 77.3%
3923043 4326.1.1.1 ↗ a+b two layers › ERH-like › ERH-like › ERH-like › ER 0.67 48.0 4.50e-01 76.2% 87.0%
3515326 10.10.1.0 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.65 49.0 4.10e-01 80.0% 84.4%
3972650 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 47.0 4.32e-01 80.0% 100.0%
3477039 224.1.1.1 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.64 52.0 4.40e-01 90.0% 64.4%
3702557 3945.1.1.0 ↗ alpha superhelices › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain 0.62 45.0 3.90e-01 78.8% 61.5%
5081134 3986.2.1.0 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.62 41.0 4.52e-01 77.5% 91.7%
5036063 206.1.3.21 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.60 45.0 3.36e-01 78.8% 44.4%
5010624 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 42.0 3.30e-01 80.0% 35.1%
3264069 822.1.1.2 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_2 0.58 39.0 4.27e-01 76.2% 91.7%
3668699 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.58 40.0 4.08e-01 93.8% 73.8%
4889364 304.56.1.3 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › Cas3_I-F_Cas2 0.58 50.0 4.46e-01 100.0% 73.9%
3179826 11.1.1.642 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 0.58 42.0 3.74e-01 80.0% 62.4%
3997451 206.1.3.9 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C 0.58 43.0 3.49e-01 78.8% 53.1%
3289401 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.58 45.0 3.89e-01 86.3% 59.2%
3861490 220.1.1.118 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH 0.57 34.0 3.22e-01 86.3% 48.0%
4175430 1119.1.1.1 ↗ a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.57 49.0 3.48e-01 95.0% 96.3%
1907312 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.57 38.0 3.06e-01 70.0% 55.2%
4411405 206.1.3.9 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C 0.57 43.0 3.44e-01 78.8% 53.1%
4472409 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.56 39.0 3.12e-01 72.5% 70.0%
3484366 284.1.2.1 ↗ a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C 0.56 47.0 4.44e-01 96.2% 94.0%
4410522 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.56 38.0 3.09e-01 71.2% 46.1%
5008102 148.1.1.0 ↗ alpha arrays › Histone-like › Histone-related › Histone 0.55 39.0 3.65e-01 73.8% 100.0%
4983111 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 40.0 4.13e-01 81.2% 88.0%
4385604 2003.1.5.53 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.53 44.0 2.96e-01 93.8% 46.1%
2512518 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.53 39.0 3.63e-01 93.8% 62.4%
4654177 1119.1.1.1 ↗ a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.53 45.0 3.23e-01 95.0% 95.5%
2831852 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.53 38.0 3.63e-01 93.8% 62.4%
4013514 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.52 38.0 3.58e-01 93.8% 61.0%
2106285 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.52 38.0 3.50e-01 93.8% 58.3%
4146398 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.52 37.0 2.98e-01 75.0% 72.9%
3345090 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.52 38.0 3.49e-01 93.8% 58.3%
2098117 304.56.1.1 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › Cas_Cas2CT1978 0.52 45.0 4.30e-01 100.0% 93.7%
5074648 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.51 37.0 3.83e-01 93.8% 84.0%
4969863 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.51 37.0 3.82e-01 93.8% 84.0%
5067865 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.51 37.0 3.87e-01 93.8% 90.0%
4990637 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.51 37.0 3.68e-01 92.5% 75.9%
4465854 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.51 38.0 3.04e-01 81.2% 75.3%
3502029 210.2.1.1 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.50 42.0 2.75e-01 100.0% 63.5%