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OR032571.1__WJZ48243.1__X__00053
Bact-VirOR032571.1__WJZ48243.1__X__00053
Identity
- Accession:
- OR032571 ↗
- Kingdom:
- phage
Quality
82.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_DSL-LC02
TaxID: 3058947
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-62
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ifdK02 | 6.10.250.2660 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.65 | 41.0 | 4.77e-01 | 76.0% | 94.1% |
| 2qr4A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.63 | 41.0 | 4.28e-01 | 96.0% | 72.3% |
| 3vz9B00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.63 | 52.0 | 4.11e-01 | 92.0% | 71.8% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.62 | 48.0 | 3.45e-01 | 84.0% | 43.2% |
| 3zg9A00 | 6.20.370.110 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.62 | 30.0 | 3.34e-01 | 98.0% | 51.2% |
| 1rsgA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 55.0 | 3.52e-01 | 100.0% | 95.1% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 53.0 | 3.68e-01 | 100.0% | 38.3% |
| 1kyqA02 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.57 | 38.0 | 4.31e-01 | 88.0% | 94.6% |
| 4navA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.57 | 44.0 | 3.09e-01 | 88.0% | 82.9% |
| 2jiiA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.56 | 46.0 | 3.13e-01 | 92.0% | 40.5% |
| 3s6xC03 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.56 | 34.0 | 3.69e-01 | 72.0% | 72.5% |
| 2levA00 | 4.10.430.10 | Few Secondary Structures › Irregular › H-NS DNA Binding Protein › Histone-like protein H-NS, C-terminal domain | 0.56 | 33.0 | 3.26e-01 | 94.0% | 50.9% |
| 3cegA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 49.0 | 2.98e-01 | 96.0% | 29.5% |
| 2x4lA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 44.0 | 3.21e-01 | 88.0% | 83.5% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.55 | 50.0 | 3.29e-01 | 100.0% | 29.8% |
| 1u7kA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.54 | 48.0 | 3.48e-01 | 98.0% | 38.2% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.53 | 45.0 | 3.32e-01 | 98.0% | 97.9% |
| 4uijA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.53 | 37.0 | 2.97e-01 | 74.0% | 76.0% |
| 7d8gA01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.53 | 41.0 | 3.04e-01 | 96.0% | 61.1% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 34.0 | 3.38e-01 | 70.0% | 67.3% |
| 2kswA01 | 3.30.1490.260 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.50 | 27.0 | 2.80e-01 | 90.0% | 43.5% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3727210 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 46.0 | 2.66e-01 | 72.0% | 7.2% |
| 1883380 | 1105.1.1.1 ↗ | alpha complex topology › Retinol uptake receptor STRA6 › Retinol uptake receptor STRA6 › Retinol uptake receptor STRA6 › RBP_receptor | 0.66 | 53.0 | 3.01e-01 | 92.0% | 7.7% |
| 4813923 | 4967.1.1.14 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Flavi_NS5_thumb | 0.65 | 41.0 | 4.01e-01 | 92.0% | 59.3% |
| 3957374 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.63 | 42.0 | 3.81e-01 | 88.0% | 50.0% |
| 3279994 | 7579.1.1.23 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAF-AH_p_II | 0.62 | 50.0 | 3.10e-01 | 94.0% | 69.1% |
| 4610901 | 4180.1.1.1 ↗ | a+b two layers › SpoVG-like › SpoVG-like › SpoVG-like › SpoVG | 0.58 | 50.0 | 4.19e-01 | 96.0% | 57.6% |
| 4037529 | 4180.1.1.1 ↗ | a+b two layers › SpoVG-like › SpoVG-like › SpoVG-like › SpoVG | 0.57 | 51.0 | 4.11e-01 | 100.0% | 54.7% |
| 3303047 | 7579.1.1.16 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Palm_thioest | 0.57 | 50.0 | 3.39e-01 | 100.0% | 87.9% |
| 4483341 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 39.0 | 3.01e-01 | 90.0% | 32.2% |
| 5051504 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.56 | 48.0 | 4.11e-01 | 92.0% | 74.7% |
| 4053035 | 4180.1.1.1 ↗ | a+b two layers › SpoVG-like › SpoVG-like › SpoVG-like › SpoVG | 0.56 | 48.0 | 3.99e-01 | 94.0% | 55.3% |
| 3844936 | 101.1.1.273 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26094 | 0.56 | 48.0 | 4.19e-01 | 96.0% | 70.7% |
| 3271984 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.56 | 48.0 | 3.35e-01 | 96.0% | 31.7% |
| 145432 | 170.2.1.2 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › Gag_p30 | 0.55 | 48.0 | 3.58e-01 | 100.0% | 90.2% |
| 3959431 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.55 | 40.0 | 3.34e-01 | 84.0% | 59.2% |
| 56911 | 170.2.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain | 0.54 | 48.0 | 3.49e-01 | 100.0% | 37.4% |
| 4525886 | 109.4.1.1360 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CBF, NOC3p | 0.53 | 45.0 | 2.56e-01 | 98.0% | 29.5% |
| 4947615 | 3604.1.1.0 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain | 0.53 | 41.0 | 3.92e-01 | 92.0% | 75.4% |
| 4989754 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.53 | 43.0 | 3.75e-01 | 92.0% | 66.3% |
| 4957877 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 44.0 | 3.93e-01 | 92.0% | 65.7% |
| 1007369 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.52 | 28.0 | 3.11e-01 | 98.0% | 51.2% |
| 4014289 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 36.0 | 2.70e-01 | 94.0% | 25.6% |
| 5029523 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.50 | 36.0 | 3.64e-01 | 88.0% | 81.2% |