←Back to structures
OR032571.1__WJZ48416.1__X__00226
Bact-VirOR032571.1__WJZ48416.1__X__00226
Identity
- Accession:
- OR032571 ↗
- Kingdom:
- phage
Quality
76.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_DSL-LC02
TaxID: 3058947
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 374-401_425-508_581-617
Domain cluster:
rep: IMGVR_UViG_3300014911_000006-3300014911-Ga0180301_1000010541__D986-1140
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 43.0 | 5.10e-01 | 99.3% | 77.9% |
| 1od3A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.76 | 45.0 | 4.82e-01 | 100.0% | 67.2% |
| 3c7fA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.75 | 48.0 | 4.91e-01 | 100.0% | 66.2% |
| 1w9sA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.75 | 48.0 | 5.02e-01 | 100.0% | 70.1% |
| 2cdoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.74 | 47.0 | 4.90e-01 | 100.0% | 68.1% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.74 | 44.0 | 4.51e-01 | 100.0% | 61.3% |
| 4a42A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.73 | 43.0 | 4.63e-01 | 100.0% | 67.7% |
| 2w47A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.72 | 45.0 | 4.68e-01 | 100.0% | 67.4% |
| 2w3jA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.72 | 44.0 | 4.62e-01 | 100.0% | 66.4% |
| 3gbwA00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.71 | 60.0 | 5.91e-01 | 100.0% | 83.9% |
| 7wdtA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.71 | 44.0 | 4.39e-01 | 100.0% | 60.7% |
| 3w5mA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.70 | 44.0 | 4.91e-01 | 100.0% | 78.3% |
| 3wnoA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.70 | 44.0 | 4.67e-01 | 100.0% | 70.8% |
| 1o6uA02 | 2.60.120.680 | Mainly Beta › Sandwich › Jelly Rolls › GOLD domain | 0.70 | 44.0 | 5.07e-01 | 100.0% | 86.8% |
| 3no8A00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.69 | 60.0 | 5.88e-01 | 100.0% | 86.0% |
| 5f7uA06 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 42.0 | 4.56e-01 | 100.0% | 71.4% |
| 5x7qA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 43.0 | 4.65e-01 | 100.0% | 73.2% |
| 5lz6A00 | 2.60.120.680 | Mainly Beta › Sandwich › Jelly Rolls › GOLD domain | 0.69 | 41.0 | 4.45e-01 | 100.0% | 69.8% |
| 1guiA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 43.0 | 4.32e-01 | 100.0% | 60.6% |
| 1lnsA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 51.0 | 4.74e-01 | 100.0% | 64.0% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 40.0 | 4.30e-01 | 99.3% | 68.2% |
| 2xomA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 40.0 | 4.08e-01 | 100.0% | 62.1% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 39.0 | 4.20e-01 | 100.0% | 70.4% |
| 1xe0C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.64 | 38.0 | 4.50e-01 | 100.0% | 85.1% |
| 1tg7A04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 40.0 | 3.88e-01 | 100.0% | 54.7% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 42.0 | 4.11e-01 | 100.0% | 61.0% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.63 | 43.0 | 4.75e-01 | 89.9% | 87.2% |
| 1sppB00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.63 | 35.0 | 3.98e-01 | 100.0% | 71.4% |
| 1uwwB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 47.0 | 4.47e-01 | 100.0% | 65.9% |
| 2x8kA03 | 2.60.120.860 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 43.0 | 4.88e-01 | 100.0% | 93.7% |
| 1js8B02 | 2.60.310.10 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain | 0.62 | 40.0 | 4.72e-01 | 90.6% | 93.3% |
| 6fzvD01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.61 | 36.0 | 4.03e-01 | 100.0% | 72.9% |
| 1sfpA00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.61 | 34.0 | 3.90e-01 | 100.0% | 72.1% |
| 1stmA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.61 | 44.0 | 4.55e-01 | 100.0% | 79.4% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 47.0 | 4.69e-01 | 100.0% | 78.9% |
| 5l73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 40.0 | 3.87e-01 | 100.0% | 58.0% |
| 1j83A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 44.0 | 4.19e-01 | 100.0% | 63.9% |
| 1yi9A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 42.0 | 4.37e-01 | 91.3% | 78.8% |
| 2hevF00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 39.0 | 4.26e-01 | 100.0% | 80.2% |
| 4d7yA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 42.0 | 4.51e-01 | 100.0% | 84.7% |
| 1tg7A05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 43.0 | 4.09e-01 | 87.9% | 64.2% |
| 2zxqA05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 42.0 | 3.85e-01 | 100.0% | 56.1% |
| 1o91A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 42.0 | 4.47e-01 | 100.0% | 84.7% |
| 4xvhA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 35.0 | 4.03e-01 | 91.9% | 83.2% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.57 | 39.0 | 4.04e-01 | 100.0% | 72.9% |
| 7zkpA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.56 | 43.0 | 3.97e-01 | 99.3% | 63.6% |
| 4oi4C01 | 2.60.120.1030 | Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain | 0.56 | 30.0 | 3.88e-01 | 100.0% | 91.7% |
| 7qs4A01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.56 | 42.0 | 3.99e-01 | 79.2% | 78.8% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 45.0 | 3.79e-01 | 100.0% | 53.1% |
| 2ztbA02 | 2.60.40.4280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 34.0 | 3.98e-01 | 100.0% | 91.9% |
| 3u07A02 | 2.60.120.1600 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 41.0 | 4.53e-01 | 100.0% | 98.3% |
| 2p3yA04 | 2.60.120.600 | Mainly Beta › Sandwich › Jelly Rolls › Domain of unknown function DUF1214, C-terminal domain | 0.54 | 42.0 | 3.96e-01 | 100.0% | 68.6% |
| 3lsoA03 | 2.60.40.2260 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.81e-01 | 100.0% | 71.5% |
| 4cp2A00 | 2.60.120.1560 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 38.0 | 3.39e-01 | 89.9% | 51.6% |
| 5a3lA00 | 2.60.120.1560 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 3.59e-01 | 91.9% | 56.9% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 39.0 | 3.28e-01 | 78.5% | 72.2% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 39.0 | 3.25e-01 | 79.9% | 85.0% |
| 2x41A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.89e-01 | 95.3% | 87.4% |
| 2xjpA01 | 2.60.120.1560 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 38.0 | 3.39e-01 | 89.9% | 53.1% |
| 3d0jA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 31.0 | 3.28e-01 | 91.3% | 65.9% |
| 5xrkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 43.0 | 4.40e-01 | 100.0% | 95.7% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060903 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.88 | 72.0 | 7.23e-01 | 99.3% | 84.0% |
| 5037351 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.85 | 72.0 | 7.26e-01 | 100.0% | 86.7% |
| 4995808 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.85 | 75.0 | 7.33e-01 | 100.0% | 85.6% |
| 4929758 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.82 | 70.0 | 6.88e-01 | 100.0% | 85.2% |
| 5047474 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.77 | 42.0 | 5.22e-01 | 99.3% | 84.2% |
| 1296148 | 10.32.1.65 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Lectin_like | 0.77 | 70.0 | 6.55e-01 | 100.0% | 80.2% |
| 4003995 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.77 | 49.0 | 4.89e-01 | 100.0% | 63.3% |
| 4970162 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.75 | 69.0 | 6.63e-01 | 100.0% | 87.9% |
| 5034749 | 10.1.2.194 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like | 0.74 | 69.0 | 6.57e-01 | 100.0% | 87.1% |
| 5061005 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.73 | 45.0 | 4.82e-01 | 100.0% | 70.0% |
| 5039047 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.73 | 43.0 | 4.80e-01 | 100.0% | 74.8% |
| 3701529 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.73 | 44.0 | 5.22e-01 | 100.0% | 87.4% |
| 3185335 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.72 | 42.0 | 5.11e-01 | 100.0% | 89.5% |
| 4475065 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.72 | 42.0 | 4.97e-01 | 100.0% | 82.9% |
| 3241382 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.72 | 61.0 | 5.91e-01 | 100.0% | 81.2% |
| 4025604 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.71 | 41.0 | 4.67e-01 | 100.0% | 75.5% |
| 3507876 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.71 | 46.0 | 4.33e-01 | 100.0% | 54.9% |
| 3566761 | 10.32.1.230 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N | 0.71 | 40.0 | 4.67e-01 | 100.0% | 78.1% |
| 4929207 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.71 | 42.0 | 5.32e-01 | 99.3% | 100.0% |
| 3275875 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 42.0 | 4.89e-01 | 100.0% | 82.9% |
| 3949688 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 47.0 | 5.21e-01 | 100.0% | 84.2% |
| 4352479 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.70 | 40.0 | 4.62e-01 | 100.0% | 76.4% |
| 3231555 | 10.32.1.24 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PITH | 0.70 | 48.0 | 4.60e-01 | 100.0% | 61.2% |
| 4028847 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.69 | 39.0 | 4.69e-01 | 100.0% | 82.0% |
| 3797760 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.69 | 47.0 | 4.79e-01 | 100.0% | 70.3% |
| 5003240 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.69 | 48.0 | 4.69e-01 | 100.0% | 65.6% |
| 1063834 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.69 | 42.0 | 4.56e-01 | 100.0% | 71.4% |
| 5005599 | 10.1.2.201 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PF27237 | 0.69 | 41.0 | 5.11e-01 | 100.0% | 97.8% |
| 4202051 | 10.32.1.271 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27237 | 0.69 | 41.0 | 5.11e-01 | 100.0% | 97.8% |
| 2879296 | 10.32.1.78 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PirA-like | 0.69 | 42.0 | 4.96e-01 | 99.3% | 89.0% |
| 3252755 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.68 | 43.0 | 4.58e-01 | 100.0% | 71.5% |
| 3925162 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.68 | 43.0 | 4.96e-01 | 99.3% | 86.4% |
| 3252392 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 42.0 | 4.03e-01 | 99.3% | 52.6% |
| 3381013 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.68 | 43.0 | 4.24e-01 | 100.0% | 58.7% |
| 5060870 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.68 | 42.0 | 4.86e-01 | 100.0% | 86.7% |
| 3791166 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 45.0 | 4.85e-01 | 100.0% | 79.8% |
| 3212513 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.67 | 44.0 | 4.15e-01 | 100.0% | 55.4% |
| 3413879 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.67 | 39.0 | 4.51e-01 | 100.0% | 80.0% |
| 5013259 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.67 | 40.0 | 4.31e-01 | 100.0% | 69.6% |
| 5050767 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.67 | 40.0 | 4.62e-01 | 100.0% | 80.9% |
| 4955347 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 46.0 | 5.30e-01 | 100.0% | 99.0% |
| 3598249 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 48.0 | 5.04e-01 | 93.3% | 82.2% |
| 5042218 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 38.0 | 4.53e-01 | 100.0% | 86.3% |
| 3249243 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 49.0 | 5.46e-01 | 100.0% | 97.5% |
| 5039581 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.65 | 43.0 | 4.86e-01 | 100.0% | 87.6% |
| 3968620 | 10.32.1.280 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF3999 | 0.65 | 45.0 | 4.90e-01 | 100.0% | 84.0% |
| 3057120 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.65 | 50.0 | 4.57e-01 | 100.0% | 61.1% |
| 5004661 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.65 | 48.0 | 4.76e-01 | 100.0% | 73.5% |
| 3921542 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.64 | 45.0 | 4.04e-01 | 100.0% | 53.0% |
| 3240316 | 10.32.1.180 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CEP104_N | 0.64 | 47.0 | 4.65e-01 | 100.0% | 72.9% |
| 5035505 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 39.0 | 4.35e-01 | 100.0% | 78.3% |
| 5041880 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 36.0 | 4.45e-01 | 100.0% | 91.1% |
| 5045891 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 43.0 | 4.73e-01 | 91.9% | 86.7% |
| 3895220 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.62 | 45.0 | 3.96e-01 | 100.0% | 51.4% |
| 3504583 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.61 | 45.0 | 3.96e-01 | 100.0% | 52.6% |
| 3242086 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.61 | 42.0 | 3.99e-01 | 100.0% | 60.0% |
| 3923894 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.60 | 42.0 | 4.14e-01 | 100.0% | 66.5% |
| 4368632 | 10.32.1.266 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GldH_lipo | 0.60 | 47.0 | 4.83e-01 | 100.0% | 86.3% |
| 3484974 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.60 | 42.0 | 4.35e-01 | 100.0% | 76.3% |
| 3567758 | 10.32.1.7 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › XRCC1_N | 0.60 | 42.0 | 4.25e-01 | 100.0% | 72.0% |
| 5002193 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 38.0 | 4.29e-01 | 99.3% | 85.5% |
| 3483295 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.60 | 41.0 | 4.24e-01 | 100.0% | 73.1% |
| 3898106 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 41.0 | 4.38e-01 | 100.0% | 80.8% |
| 3220762 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.59 | 37.0 | 3.97e-01 | 100.0% | 72.8% |
| 3993514 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.59 | 46.0 | 4.43e-01 | 100.0% | 72.7% |
| 3997147 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.59 | 36.0 | 3.94e-01 | 100.0% | 74.2% |
| 4883090 | 10.2.1.20 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Birna_VP2 | 0.59 | 44.0 | 3.19e-01 | 100.0% | 27.2% |
| 3525668 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.59 | 44.0 | 3.88e-01 | 100.0% | 53.2% |
| 3892220 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.58 | 36.0 | 3.80e-01 | 100.0% | 66.7% |
| 5011055 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 51.0 | 4.72e-01 | 100.0% | 75.1% |
| 3249076 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 4.22e-01 | 100.0% | 76.6% |
| 4181607 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 39.0 | 4.31e-01 | 100.0% | 86.7% |
| 2523954 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.56 | 45.0 | 4.43e-01 | 100.0% | 79.6% |
| 3541794 | 10.32.1.228 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SID-1_RNA_chan | 0.56 | 42.0 | 4.38e-01 | 100.0% | 85.2% |
| 5042965 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 44.0 | 4.49e-01 | 100.0% | 85.5% |
| 3556465 | 5001.1.1.52 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › SID-1_RNA_chan | 0.55 | 42.0 | 4.33e-01 | 100.0% | 83.6% |
| 5007276 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 38.0 | 3.98e-01 | 99.3% | 75.0% |
| 4620910 | 10.32.1.183 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM87A-B_GOLD | 0.55 | 46.0 | 4.54e-01 | 100.0% | 84.5% |
| 3469931 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.54 | 44.0 | 4.31e-01 | 93.3% | 79.4% |
| 3581433 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.54 | 44.0 | 4.02e-01 | 91.9% | 65.6% |
| 1290126 | 10.18.1.1 ↗ | beta sandwiches › jelly-roll › VPA0735-like › VPA0735-like › DUF1214 | 0.54 | 41.0 | 3.52e-01 | 100.0% | 49.4% |
| 3515623 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.53 | 42.0 | 4.01e-01 | 91.3% | 71.4% |
| 3869023 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.53 | 46.0 | 4.10e-01 | 96.0% | 78.1% |
| 3593967 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 38.0 | 4.14e-01 | 100.0% | 91.7% |
| 3477110 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.53 | 41.0 | 3.91e-01 | 83.2% | 85.6% |
| 3230186 | 10.4.1.19 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Glycoprotein | 0.53 | 33.0 | 3.68e-01 | 100.0% | 80.0% |
| 3470062 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.52 | 35.0 | 3.54e-01 | 100.0% | 67.6% |
| 3617763 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.52 | 41.0 | 3.95e-01 | 91.3% | 72.0% |
| 1839934 | 10.12.1.60 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AUDH_Cupin | 0.52 | 36.0 | 3.36e-01 | 100.0% | 56.3% |
D2
high
residues 625-642_1045-1154
Domain cluster:
rep: IMGVR_UViG_3300026259_000100-3300026259-Ga0208896_10049761__D108-217
D3
high
residues 1166-1300
Domain cluster:
rep: KJ019161.1__AIX46147.1__Syn7803C36_92__00092__D107-227
D4
medium
residues 129-158_233-270
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uhtA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.64 | 48.0 | 4.00e-01 | 80.9% | 88.1% |
| 3vpyA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.62 | 47.0 | 3.64e-01 | 79.4% | 83.4% |
| 4h87A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.62 | 47.0 | 3.84e-01 | 80.9% | 90.3% |
| 7wrgA02 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.61 | 44.0 | 3.59e-01 | 77.9% | 79.5% |
| 2jpeA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.60 | 45.0 | 3.69e-01 | 82.4% | 84.1% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 43.0 | 3.79e-01 | 82.4% | 76.4% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.56 | 47.0 | 4.42e-01 | 97.1% | 95.3% |
| 3gm8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 3.79e-01 | 85.3% | 81.9% |
| 6iymA02 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.53 | 40.0 | 2.91e-01 | 82.4% | 73.2% |
| 4d8mA03 | 2.100.10.40 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › | 0.53 | 41.0 | 3.04e-01 | 86.8% | 99.0% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.53 | 40.0 | 3.71e-01 | 83.8% | 85.7% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 33.0 | 3.69e-01 | 79.4% | 89.4% |
| 4nh0A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 40.0 | 2.78e-01 | 82.4% | 98.3% |
| 1kz7C02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 39.0 | 3.22e-01 | 82.4% | 69.3% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 38.0 | 3.86e-01 | 83.8% | 77.9% |
| 6mjjC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.40e-01 | 83.8% | 81.6% |
| 1plsA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.32e-01 | 82.4% | 76.1% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 42.0 | 3.40e-01 | 94.1% | 72.3% |
| 1pjxA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 36.0 | 2.46e-01 | 79.4% | 93.9% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3646479 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.70 | 52.0 | 4.35e-01 | 77.9% | 95.6% |
| 4556837 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.70 | 55.0 | 5.53e-01 | 85.3% | 100.0% |
| 3251958 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.64 | 45.0 | 3.90e-01 | 75.0% | 96.3% |
| 3676877 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.62 | 46.0 | 3.36e-01 | 79.4% | 84.7% |
| 3568267 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.62 | 46.0 | 4.02e-01 | 77.9% | 96.0% |
| 3269481 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.62 | 46.0 | 3.68e-01 | 79.4% | 83.5% |
| 3614433 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.61 | 46.0 | 3.51e-01 | 80.9% | 91.2% |
| 3938167 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.61 | 46.0 | 3.56e-01 | 80.9% | 74.3% |
| 3621871 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.60 | 46.0 | 3.70e-01 | 82.4% | 82.2% |
| 4028385 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.60 | 48.0 | 3.67e-01 | 86.8% | 73.5% |
| 3992928 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.60 | 46.0 | 3.84e-01 | 83.8% | 86.7% |
| 3992248 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.56 | 28.0 | 3.19e-01 | 86.8% | 61.2% |
| 3923335 | 221.6.1.2 ↗ | a+b two layers › beta-Grasp › MM3350-like › MM3350-like › SNAPC3 | 0.56 | 47.0 | 3.57e-01 | 98.5% | 94.4% |
| 2756608 | 270.1.1.0 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related | 0.55 | 34.0 | 3.29e-01 | 79.4% | 54.4% |
| 3248470 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.54 | 47.0 | 3.98e-01 | 100.0% | 85.0% |
| 4947543 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.54 | 33.0 | 3.31e-01 | 86.8% | 56.8% |
| 3264881 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 46.0 | 3.94e-01 | 98.5% | 93.9% |
| 3930062 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 3.59e-01 | 85.3% | 84.8% |
| 3655163 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.53 | 38.0 | 3.87e-01 | 86.8% | 78.5% |
| 3411789 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.52 | 39.0 | 3.20e-01 | 83.8% | 70.0% |
| 3494530 | 5.1.4.155 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 | 0.52 | 40.0 | 2.64e-01 | 92.6% | 18.7% |
| 3635125 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.50 | 39.0 | 3.08e-01 | 89.7% | 86.0% |
D5
medium
residues 650-842
Domain cluster:
rep: IMGVR_UViG_3300017713_000356-3300017713-Ga0181391_10004821__D555-565_585-697_740-769
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.71 | 25.0 | 3.96e-01 | 87.6% | 78.8% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.69 | 30.0 | 4.42e-01 | 98.4% | 90.7% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.68 | 32.0 | 4.61e-01 | 97.4% | 97.7% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 32.0 | 4.35e-01 | 94.3% | 96.8% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.62 | 21.0 | 3.42e-01 | 79.3% | 77.9% |
| 1rhfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 25.0 | 3.38e-01 | 85.0% | 91.2% |
| 1vwxB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 35.0 | 3.67e-01 | 99.5% | 74.4% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 29.0 | 3.44e-01 | 99.5% | 80.3% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.50 | 21.0 | 3.27e-01 | 78.2% | 96.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4254437 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.66 | 31.0 | 4.45e-01 | 96.4% | 98.8% |
| 3390155 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.65 | 30.0 | 4.43e-01 | 94.3% | 100.0% |
| 4218835 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.64 | 33.0 | 4.44e-01 | 97.9% | 96.8% |
| 4308012 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.64 | 29.0 | 4.28e-01 | 92.2% | 100.0% |
| 5046974 | 1.1.8.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › aSelB_III | 0.63 | 35.0 | 4.54e-01 | 97.9% | 97.1% |
| 4029902 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.61 | 34.0 | 4.07e-01 | 96.9% | 79.2% |
| 3595113 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.60 | 34.0 | 3.96e-01 | 96.9% | 76.3% |
| 4790956 | 1.1.7.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C | 0.60 | 34.0 | 4.24e-01 | 98.4% | 92.1% |
| 3982999 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.50 | 22.0 | 3.08e-01 | 80.3% | 80.0% |
D6
medium
residues 845-1043
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.65 | 30.0 | 4.50e-01 | 81.9% | 100.0% |
| 4kktA01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.58 | 27.0 | 3.68e-01 | 85.9% | 86.5% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 30.0 | 4.02e-01 | 74.9% | 100.0% |
| 4il7A00 | 2.60.120.1300 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 20.0 | 2.89e-01 | 78.4% | 72.9% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3978877 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 35.0 | 5.19e-01 | 80.9% | 100.0% |
| 4636885 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 30.0 | 4.78e-01 | 72.9% | 100.0% |
| 4074297 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.72 | 31.0 | 4.06e-01 | 78.9% | 70.4% |
| 4274453 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.71 | 28.0 | 4.20e-01 | 74.4% | 83.5% |
| 4988964 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.70 | 29.0 | 4.34e-01 | 74.4% | 89.4% |
| 4553723 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.69 | 34.0 | 4.88e-01 | 83.4% | 98.9% |
| 3688604 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.66 | 33.0 | 4.38e-01 | 77.9% | 89.5% |
| 4644809 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.65 | 32.0 | 4.19e-01 | 75.9% | 82.6% |
| 3813200 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.65 | 32.0 | 4.23e-01 | 77.9% | 84.2% |
| 3688796 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 29.0 | 3.98e-01 | 74.9% | 97.8% |
| 3698630 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.59 | 28.0 | 3.79e-01 | 78.9% | 85.7% |
| 3944005 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.58 | 32.0 | 3.80e-01 | 84.9% | 78.9% |
| 3196339 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 34.0 | 4.13e-01 | 91.0% | 93.8% |
| 3252482 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.55 | 26.0 | 3.53e-01 | 81.9% | 89.5% |
| 3257788 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 25.0 | 3.38e-01 | 79.4% | 84.0% |
| 3751462 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 32.0 | 3.92e-01 | 74.9% | 91.5% |
| 3984362 | 1.1.9.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TnpB_IS66 | 0.53 | 24.0 | 3.30e-01 | 74.4% | 85.3% |
| 4936711 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 27.0 | 3.56e-01 | 79.9% | 97.0% |