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OR039881.1__WJJ54301.1__X__00035

Bact-Vir

OR039881.1__WJJ54301.1__X__00035

Identity

Accession:
OR039881 ↗
Kingdom:
phage

Quality

49.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zobellviridae› Icepovirus› Vibrio_phage_JPW

TaxID: 3046621

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 791-872
PDB
D2 medium residues 368-461
PDB
D3 medium residues 462-518_774-787
PDB
D4 medium residues 568-657
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 40.0 5.20e-01 100.0% 98.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 34.0 3.98e-01 100.0% 69.8%
1tifA00 3.10.20.80 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Translation initiation factor 3 (IF-3), N-terminal domain 0.63 43.0 4.62e-01 98.9% 85.5%
1jb0E00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.67e-01 100.0% 89.9%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.58 35.0 4.20e-01 100.0% 93.1%
1dleB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 46.0 3.97e-01 94.4% 77.5%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 40.0 3.63e-01 96.7% 58.1%
1mu5A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.51 41.0 4.38e-01 98.9% 100.0%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.50 39.0 4.07e-01 86.7% 96.2%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3761319 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.68 43.0 5.02e-01 100.0% 89.2%
4599978 221.2.1.0 ↗ a+b two layers › beta-Grasp › IF3-N › IF3-N 0.64 43.0 4.49e-01 98.9% 77.5%
4344731 221.2.1.2 ↗ a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 0.61 47.0 4.74e-01 82.2% 83.3%
3551394 810.1.1.2 ↗ a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › GGACT 0.58 40.0 3.33e-01 70.0% 80.4%
3444533 1.1.11.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.58 50.0 4.07e-01 96.7% 99.4%
3786978 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 40.0 4.46e-01 100.0% 94.2%
4387099 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 36.0 3.76e-01 100.0% 72.5%
4642857 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 36.0 3.78e-01 100.0% 73.8%
4073616 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.54 28.0 3.22e-01 95.6% 66.2%
4162968 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.54 34.0 3.61e-01 100.0% 72.2%
4973392 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.54 41.0 3.82e-01 84.4% 65.5%
5026843 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.54 37.0 3.31e-01 100.0% 48.1%
3226402 243.1.1.82 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26529 0.54 41.0 3.48e-01 84.4% 85.6%
3786067 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.53 36.0 3.78e-01 100.0% 77.5%
4525749 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.51 32.0 3.38e-01 95.6% 70.0%
3281242 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.51 39.0 3.50e-01 83.3% 90.8%
3227096 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.51 34.0 3.48e-01 95.6% 71.8%
D5 medium residues 673-773
PDB
D6 medium residues 907-1068
PDB
D7 medium residues 1069-1195
PDB