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OR039881.1__WJJ54309.1__X__00006
Bact-VirOR039881.1__WJJ54309.1__X__00006
Identity
- Accession:
- OR039881 ↗
- Kingdom:
- phage
Quality
72.0
mean pLDDT
Taxonomy
TaxID: 3046621
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-58
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.63 | 47.0 | 4.53e-01 | 81.0% | 94.0% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.62 | 45.0 | 3.96e-01 | 77.6% | 51.7% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.62 | 46.0 | 3.21e-01 | 82.8% | 85.4% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.61 | 45.0 | 4.13e-01 | 81.0% | 66.2% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.60 | 43.0 | 4.12e-01 | 77.6% | 92.8% |
| 1cw1A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.60 | 52.0 | 3.16e-01 | 100.0% | 18.6% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.60 | 40.0 | 3.12e-01 | 70.7% | 32.3% |
| 2ztgA05 | 3.30.54.20 | Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › | 0.59 | 42.0 | 4.36e-01 | 89.7% | 83.6% |
| 1itpA00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.58 | 41.0 | 3.83e-01 | 75.9% | 62.3% |
| 3vb0A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 47.0 | 3.68e-01 | 91.4% | 72.1% |
| 1mk4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 43.0 | 3.26e-01 | 84.5% | 42.0% |
| 4gczB03 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 43.0 | 3.21e-01 | 84.5% | 92.5% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 3.77e-01 | 79.3% | 63.0% |
| 4lqbA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 44.0 | 3.50e-01 | 89.7% | 67.7% |
| 2wzvA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.55 | 42.0 | 2.91e-01 | 84.5% | 76.1% |
| 2rk9B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 44.0 | 3.54e-01 | 87.9% | 76.9% |
| 3a7rA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 43.0 | 2.99e-01 | 94.8% | 62.5% |
| 3lm4A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 43.0 | 3.36e-01 | 89.7% | 42.6% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.54 | 45.0 | 3.40e-01 | 98.3% | 85.9% |
| 1vmfC00 | 2.60.120.460 | Mainly Beta › Sandwich › Jelly Rolls › YjbQ-like | 0.53 | 38.0 | 3.01e-01 | 79.3% | 99.3% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 40.0 | 3.08e-01 | 86.2% | 67.1% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 42.0 | 3.81e-01 | 89.7% | 95.1% |
| 1lfwA03 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 37.0 | 3.33e-01 | 79.3% | 55.7% |
| 6z30A02 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.51 | 42.0 | 3.25e-01 | 94.8% | 52.9% |
| 3hxiA01 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.50 | 43.0 | 3.15e-01 | 100.0% | 43.3% |
| 2jfkC01 | 3.30.70.3290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 43.0 | 3.77e-01 | 98.3% | 82.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3220478 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.73 | 53.0 | 4.49e-01 | 79.3% | 90.0% |
| 3629627 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.67 | 48.0 | 4.46e-01 | 75.9% | 97.3% |
| 3586304 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.66 | 49.0 | 3.87e-01 | 81.0% | 73.8% |
| 4030675 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.63 | 45.0 | 4.09e-01 | 77.6% | 57.5% |
| 5043206 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.62 | 47.0 | 4.24e-01 | 84.5% | 60.0% |
| 5009157 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 47.0 | 3.85e-01 | 84.5% | 74.5% |
| 4153537 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.60 | 45.0 | 4.08e-01 | 81.0% | 78.8% |
| 3471644 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.60 | 48.0 | 2.89e-01 | 91.4% | 41.9% |
| 3655963 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 43.0 | 4.14e-01 | 79.3% | 70.0% |
| 5077873 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.58 | 32.0 | 2.95e-01 | 82.8% | 39.2% |
| 4975323 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.57 | 45.0 | 3.97e-01 | 87.9% | 56.7% |
| 5000612 | 304.19.1.0 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain | 0.57 | 39.0 | 3.73e-01 | 72.4% | 75.7% |
| 4400331 | 4.8.1.23 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RemA-like | 0.57 | 46.0 | 4.32e-01 | 93.1% | 72.0% |
| 3300506 | 4286.1.1.1 ↗ | beta complex topology › At5g01610-like › At5g01610-like › At5g01610-like › DUF538 | 0.57 | 45.0 | 3.43e-01 | 87.9% | 47.9% |
| 4970968 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.55 | 39.0 | 3.31e-01 | 79.3% | 73.5% |
| 3333863 | 304.8.1.47 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd | 0.55 | 40.0 | 3.34e-01 | 79.3% | 49.1% |
| 3837690 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.55 | 41.0 | 3.81e-01 | 81.0% | 62.7% |
| 5135 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.55 | 36.0 | 3.20e-01 | 86.2% | 45.3% |
| 3439107 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.55 | 39.0 | 3.68e-01 | 79.3% | 65.3% |
| 3968877 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 42.0 | 3.97e-01 | 87.9% | 97.3% |
| 3947041 | 872.4.1.1 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like › YdgH_BhsA-like | 0.54 | 38.0 | 4.06e-01 | 79.3% | 93.9% |
| 3942221 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 41.0 | 3.87e-01 | 87.9% | 98.7% |
| 4069972 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.53 | 39.0 | 3.69e-01 | 81.0% | 69.3% |
| 4006107 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.53 | 41.0 | 3.86e-01 | 87.9% | 98.7% |
| 3305323 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 38.0 | 3.63e-01 | 81.0% | 70.7% |
| 5057477 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 38.0 | 3.26e-01 | 79.3% | 59.0% |
| 1082802 | 6094.1.1.1 ↗ | a+b two layers › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › KAsynt_C_assoc | 0.52 | 43.0 | 4.10e-01 | 94.8% | 95.7% |
| 4611007 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.52 | 39.0 | 3.23e-01 | 84.5% | 50.9% |
| 3710689 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.51 | 38.0 | 3.30e-01 | 84.5% | 52.0% |
| 4992003 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.51 | 37.0 | 2.90e-01 | 79.3% | 74.8% |